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intelliseqngs/task_vcf-anno-cosmic : 2.0.0

Ubuntu 22.04.2 LTS

Latest release: about 1 year ago - 2,498 downloads - 346 dependencies

JSON

Dependencies

ubuntu/adduser 3.118ubuntu5
ubuntu/apt 2.4.9
ubuntu/base-files 12ubuntu4.3
ubuntu/base-passwd 3.5.52build1
ubuntu/bash 5.1-6ubuntu1
ubuntu/binutils-common 2.38-4ubuntu2.2
ubuntu/binutils-x86-64-linux-gnu 2.38-4ubuntu2.2
ubuntu/binutils 2.38-4ubuntu2.2
ubuntu/bsdutils 1:2.37.2-4ubuntu3
ubuntu/build-essential 12.9ubuntu3
ubuntu/bzip2-doc 1.0.8-5build1
ubuntu/bzip2 1.0.8-5build1
ubuntu/ca-certificates 20230311ubuntu0.22.04.1
ubuntu/coreutils 8.32-4.1ubuntu1
ubuntu/cpp-11 11.3.0-1ubuntu1~22.04.1
ubuntu/cpp 4:11.2.0-1ubuntu1
ubuntu/curl 7.81.0-1ubuntu1.13
ubuntu/dash 0.5.11 git20210903 057cd650a4ed-3build1
ubuntu/dbus 1.12.20-2ubuntu4.1
ubuntu/debconf 1.5.79ubuntu1
ubuntu/debianutils 5.5-1ubuntu2
ubuntu/diffutils 1:3.8-0ubuntu2
ubuntu/dirmngr 2.2.27-3ubuntu2.1
ubuntu/distro-info-data 0.52ubuntu0.4
ubuntu/dmsetup 2:1.02.175-2.1ubuntu4
ubuntu/dpkg-dev 1.21.1ubuntu2.2
ubuntu/dpkg 1.21.1ubuntu2.2
ubuntu/e2fsprogs 1.46.5-2ubuntu1.1
ubuntu/fakeroot 1.28-1ubuntu1
ubuntu/findutils 4.8.0-1ubuntu3
ubuntu/fontconfig-config 2.13.1-4.2ubuntu5
ubuntu/fonts-dejavu-core 2.37-2build1
ubuntu/g -11 11.3.0-1ubuntu1~22.04.1
ubuntu/g 4:11.2.0-1ubuntu1
ubuntu/gawk 1:5.1.0-1build3
ubuntu/gcc-11-base 11.3.0-1ubuntu1~22.04.1
ubuntu/gcc-11 11.3.0-1ubuntu1~22.04.1
ubuntu/gcc-12-base 12.1.0-2ubuntu1~22.04
ubuntu/gcc 4:11.2.0-1ubuntu1
ubuntu/gir1.2-glib-2.0 1.72.0-1
ubuntu/gir1.2-packagekitglib-1.0 1.2.5-2ubuntu2
ubuntu/gnupg-l10n 2.2.27-3ubuntu2.1
ubuntu/gnupg-utils 2.2.27-3ubuntu2.1
ubuntu/gnupg 2.2.27-3ubuntu2.1
ubuntu/gpg-agent 2.2.27-3ubuntu2.1
ubuntu/gpg-wks-client 2.2.27-3ubuntu2.1
ubuntu/gpg-wks-server 2.2.27-3ubuntu2.1
ubuntu/gpg 2.2.27-3ubuntu2.1
ubuntu/gpgconf 2.2.27-3ubuntu2.1
ubuntu/gpgsm 2.2.27-3ubuntu2.1
ubuntu/gpgv 2.2.27-3ubuntu2.1
ubuntu/grep 3.7-1build1
ubuntu/gzip 1.10-4ubuntu4.1
ubuntu/hostname 3.23ubuntu2
ubuntu/init-system-helpers 1.62
ubuntu/iso-codes 4.9.0-1
ubuntu/javascript-common 11 nmu1
ubuntu/jo 1.4-1
ubuntu/jq 1.6-2.1ubuntu3
ubuntu/libacl1 2.3.1-1
ubuntu/libalgorithm-diff-perl 1.201-1
ubuntu/libalgorithm-diff-xs-perl 0.04-6build3
ubuntu/libalgorithm-merge-perl 0.08-3
ubuntu/libapparmor1 3.0.4-2ubuntu2.2
ubuntu/libappstream4 0.15.2-2
ubuntu/libapt-pkg6.0 2.4.9
ubuntu/libargon2-1 0~20171227-0.3
ubuntu/libasan6 11.3.0-1ubuntu1~22.04.1
ubuntu/libassuan0 2.5.5-1build1
ubuntu/libatomic1 12.1.0-2ubuntu1~22.04
ubuntu/libattr1 1:2.5.1-1build1
ubuntu/libaudit-common 1:3.0.7-1build1
ubuntu/libaudit1 1:3.0.7-1build1
ubuntu/libbinutils 2.38-4ubuntu2.2
ubuntu/libblkid1 2.37.2-4ubuntu3
ubuntu/libbrotli1 1.0.9-2build6
ubuntu/libbsd0 0.11.5-1
ubuntu/libbz2-1.0 1.0.8-5build1
ubuntu/libbz2-dev 1.0.8-5build1
ubuntu/libc-bin 2.35-0ubuntu3.1
ubuntu/libc-dev-bin 2.35-0ubuntu3.1
ubuntu/libc-devtools 2.35-0ubuntu3.1
ubuntu/libc6-dev 2.35-0ubuntu3.1
ubuntu/libc6 2.35-0ubuntu3.1
ubuntu/libcap-ng0 0.7.9-2.2build3
ubuntu/libcap2-bin 1:2.44-1ubuntu0.22.04.1
ubuntu/libcap2 1:2.44-1ubuntu0.22.04.1
ubuntu/libcc1-0 12.1.0-2ubuntu1~22.04
ubuntu/libcom-err2 1.46.5-2ubuntu1.1
ubuntu/libcrypt-dev 1:4.4.27-1
ubuntu/libcrypt1 1:4.4.27-1
ubuntu/libcryptsetup12 2:2.4.3-1ubuntu1.1
ubuntu/libctf-nobfd0 2.38-4ubuntu2.2
ubuntu/libctf0 2.38-4ubuntu2.2
ubuntu/libcurl3-gnutls 7.81.0-1ubuntu1.13
ubuntu/libcurl4-openssl-dev 7.81.0-1ubuntu1.13
ubuntu/libcurl4 7.81.0-1ubuntu1.13
ubuntu/libdb5.3 5.3.28 dfsg1-0.8ubuntu3
ubuntu/libdbus-1-3 1.12.20-2ubuntu4.1
ubuntu/libdebconfclient0 0.261ubuntu1
ubuntu/libdeflate0 1.10-2
ubuntu/libdevmapper1.02.1 2:1.02.175-2.1ubuntu4
ubuntu/libdpkg-perl 1.21.1ubuntu2.2
ubuntu/libdw1 0.186-1build1
ubuntu/libelf1 0.186-1build1
ubuntu/libexpat1-dev 2.4.7-1ubuntu0.2
ubuntu/libexpat1 2.4.7-1ubuntu0.2
ubuntu/libext2fs2 1.46.5-2ubuntu1.1
ubuntu/libfakeroot 1.28-1ubuntu1
ubuntu/libffi8 3.4.2-4
ubuntu/libfile-fcntllock-perl 0.22-3build7
ubuntu/libfontconfig1 2.13.1-4.2ubuntu5
ubuntu/libfreetype6 2.11.1 dfsg-1ubuntu0.2
ubuntu/libgcc-11-dev 11.3.0-1ubuntu1~22.04.1
ubuntu/libgcc-s1 12.1.0-2ubuntu1~22.04
ubuntu/libgcrypt20 1.9.4-3ubuntu3
ubuntu/libgd3 2.3.0-2ubuntu2
ubuntu/libgdbm-compat4 1.23-1
ubuntu/libgdbm6 1.23-1
ubuntu/libgirepository-1.0-1 1.72.0-1
ubuntu/libglib2.0-0 2.72.4-0ubuntu2.2
ubuntu/libglib2.0-bin 2.72.4-0ubuntu2.2
ubuntu/libglib2.0-data 2.72.4-0ubuntu2.2
ubuntu/libgmp10 2:6.2.1 dfsg-3ubuntu1
ubuntu/libgnutls30 3.7.3-4ubuntu1.2
ubuntu/libgomp1 12.1.0-2ubuntu1~22.04
ubuntu/libgpg-error0 1.43-3
ubuntu/libgssapi-krb5-2 1.19.2-2ubuntu0.2
ubuntu/libgstreamer1.0-0 1.20.3-0ubuntu1
ubuntu/libhogweed6 3.7.3-1build2
ubuntu/libhtscodecs2 1.1.1-3
ubuntu/libicu70 70.1-2
ubuntu/libidn2-0 2.3.2-2build1
ubuntu/libip4tc2 1.8.7-1ubuntu5.1
ubuntu/libisl23 0.24-2build1
ubuntu/libitm1 12.1.0-2ubuntu1~22.04
ubuntu/libjbig0 2.1-3.1ubuntu0.22.04.1
ubuntu/libjpeg-turbo8 2.1.2-0ubuntu1
ubuntu/libjpeg8 8c-2ubuntu10
ubuntu/libjq1 1.6-2.1ubuntu3
ubuntu/libjs-jquery 3.6.0 dfsg ~3.5.13-1
ubuntu/libjs-sphinxdoc 4.3.2-1
ubuntu/libjs-underscore 1.13.2~dfsg-2
ubuntu/libjson-c5 0.15-3~ubuntu1.22.04.1
ubuntu/libk5crypto3 1.19.2-2ubuntu0.2
ubuntu/libkeyutils1 1.6.1-2ubuntu3
ubuntu/libkmod2 29-1ubuntu1
ubuntu/libkrb5-3 1.19.2-2ubuntu0.2
ubuntu/libkrb5support0 1.19.2-2ubuntu0.2
ubuntu/libksba8 1.6.0-2ubuntu0.2
ubuntu/libldap-2.5-0 2.5.14 dfsg-0ubuntu0.22.04.2
ubuntu/libldap-common 2.5.14 dfsg-0ubuntu0.22.04.2
ubuntu/liblocale-gettext-perl 1.07-4build3
ubuntu/liblsan0 12.1.0-2ubuntu1~22.04
ubuntu/liblz4-1 1.9.3-2build2
ubuntu/liblzma-dev 5.2.5-2ubuntu1
ubuntu/liblzma5 5.2.5-2ubuntu1
ubuntu/libmd0 1.0.4-1build1
ubuntu/libmount1 2.37.2-4ubuntu3
ubuntu/libmpc3 1.2.1-2build1
ubuntu/libmpdec3 2.5.1-2build2
ubuntu/libmpfr6 4.1.0-3build3
ubuntu/libncurses-dev 6.3-2ubuntu0.1
ubuntu/libncurses5-dev 6.3-2ubuntu0.1
ubuntu/libncurses6 6.3-2ubuntu0.1
ubuntu/libncursesw6 6.3-2ubuntu0.1
ubuntu/libnettle8 3.7.3-1build2
ubuntu/libnghttp2-14 1.43.0-1build3
ubuntu/libnpth0 1.6-3build2
ubuntu/libnsl-dev 1.3.0-2build2
ubuntu/libnsl2 1.3.0-2build2
ubuntu/libnss-systemd 249.11-0ubuntu3.9
ubuntu/libonig5 6.9.7.1-2build1
ubuntu/libp11-kit0 0.24.0-6build1
ubuntu/libpackagekit-glib2-18 1.2.5-2ubuntu2
ubuntu/libpam-cap 1:2.44-1ubuntu0.22.04.1
ubuntu/libpam-modules-bin 1.4.0-11ubuntu2.3
ubuntu/libpam-modules 1.4.0-11ubuntu2.3
ubuntu/libpam-runtime 1.4.0-11ubuntu2.3
ubuntu/libpam-systemd 249.11-0ubuntu3.9
ubuntu/libpam0g 1.4.0-11ubuntu2.3
ubuntu/libpcre2-8-0 10.39-3ubuntu0.1
ubuntu/libpcre3 2:8.39-13ubuntu0.22.04.1
ubuntu/libperl5.34 5.34.0-3ubuntu1.2
ubuntu/libpng16-16 1.6.37-3build5
ubuntu/libpolkit-agent-1-0 0.105-33
ubuntu/libpolkit-gobject-1-0 0.105-33
ubuntu/libprocps8 2:3.3.17-6ubuntu2
ubuntu/libpsl5 0.21.0-1.2build2
ubuntu/libpython3-dev 3.10.6-1~22.04
ubuntu/libpython3-stdlib 3.10.6-1~22.04
ubuntu/libpython3.10-dev 3.10.6-1~22.04.2ubuntu1.1
ubuntu/libpython3.10-minimal 3.10.6-1~22.04.2ubuntu1.1
ubuntu/libpython3.10-stdlib 3.10.6-1~22.04.2ubuntu1.1
ubuntu/libpython3.10 3.10.6-1~22.04.2ubuntu1.1
ubuntu/libquadmath0 12.1.0-2ubuntu1~22.04
ubuntu/libreadline8 8.1.2-1
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2build4
ubuntu/libsasl2-2 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libsasl2-modules-db 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libsasl2-modules 2.1.27 dfsg2-3ubuntu1.2
ubuntu/libseccomp2 2.5.3-2ubuntu2
ubuntu/libselinux1 3.3-1build2
ubuntu/libsemanage-common 3.3-1build2
ubuntu/libsemanage2 3.3-1build2
ubuntu/libsepol2 3.3-1build1
ubuntu/libsigsegv2 2.13-1ubuntu3
ubuntu/libsmartcols1 2.37.2-4ubuntu3
ubuntu/libsqlite3-0 3.37.2-2ubuntu0.1
ubuntu/libss2 1.46.5-2ubuntu1.1
ubuntu/libssh-4 0.9.6-2ubuntu0.22.04.1
ubuntu/libssl3 3.0.2-0ubuntu1.10
ubuntu/libstdc -11-dev 11.3.0-1ubuntu1~22.04.1
ubuntu/libstdc 6 12.1.0-2ubuntu1~22.04
ubuntu/libstemmer0d 2.2.0-1build1
ubuntu/libsystemd0 249.11-0ubuntu3.9
ubuntu/libtasn1-6 4.18.0-4build1
ubuntu/libtiff5 4.3.0-6ubuntu0.4
ubuntu/libtinfo6 6.3-2ubuntu0.1
ubuntu/libtirpc-common 1.3.2-2ubuntu0.1
ubuntu/libtirpc-dev 1.3.2-2ubuntu0.1
ubuntu/libtirpc3 1.3.2-2ubuntu0.1
ubuntu/libtsan0 11.3.0-1ubuntu1~22.04.1
ubuntu/libubsan1 12.1.0-2ubuntu1~22.04
ubuntu/libudev1 249.11-0ubuntu3.9
ubuntu/libunistring2 1.0-1
ubuntu/libunwind8 1.3.2-2build2
ubuntu/libuuid1 2.37.2-4ubuntu3
ubuntu/libwebp7 1.2.2-2ubuntu0.22.04.1
ubuntu/libx11-6 2:1.7.5-1ubuntu0.2
ubuntu/libx11-data 2:1.7.5-1ubuntu0.2
ubuntu/libxau6 1:1.0.9-1build5
ubuntu/libxcb1 1.14-3ubuntu3
ubuntu/libxdmcp6 1:1.1.3-0ubuntu5
ubuntu/libxml2 2.9.13 dfsg-1ubuntu0.3
ubuntu/libxmlb2 0.3.6-2build1
ubuntu/libxpm4 1:3.5.12-1ubuntu0.22.04.1
ubuntu/libxxhash0 0.8.1-1
ubuntu/libyaml-0-2 0.2.2-1build2
ubuntu/libzstd1 1.4.8 dfsg-3build1
ubuntu/linux-libc-dev 5.15.0-78.85
ubuntu/locales 2.35-0ubuntu3.1
ubuntu/login 1:4.8.1-2ubuntu2.1
ubuntu/logsave 1.46.5-2ubuntu1.1
ubuntu/lsb-base 11.1.0ubuntu4
ubuntu/lsb-release 11.1.0ubuntu4
ubuntu/lto-disabled-list 24
ubuntu/make 4.3-4.1build1
ubuntu/manpages-dev 5.10-1ubuntu1
ubuntu/manpages 5.10-1ubuntu1
ubuntu/mawk 1.3.4.20200120-3
ubuntu/media-types 7.0.0
ubuntu/mount 2.37.2-4ubuntu3
ubuntu/ncurses-base 6.3-2ubuntu0.1
ubuntu/ncurses-bin 6.3-2ubuntu0.1
ubuntu/netbase 6.3
ubuntu/networkd-dispatcher 2.1-2ubuntu0.22.04.2
ubuntu/openssl 3.0.2-0ubuntu1.10
ubuntu/packagekit-tools 1.2.5-2ubuntu2
ubuntu/packagekit 1.2.5-2ubuntu2
ubuntu/passwd 1:4.8.1-2ubuntu2.1
ubuntu/patch 2.7.6-7build2
ubuntu/perl-base 5.34.0-3ubuntu1.2
ubuntu/perl-modules-5.34 5.34.0-3ubuntu1.2
ubuntu/perl 5.34.0-3ubuntu1.2
ubuntu/pinentry-curses 1.1.1-1build2
ubuntu/pkexec 0.105-33
ubuntu/policykit-1 0.105-33
ubuntu/polkitd 0.105-33
ubuntu/procps 2:3.3.17-6ubuntu2
ubuntu/publicsuffix 20211207.1025-1
ubuntu/python-apt-common 2.4.0ubuntu1
ubuntu/python3-apt 2.4.0ubuntu1
ubuntu/python3-blinker 1.4 dfsg1-0.4
ubuntu/python3-cffi-backend 1.15.0-1build2
ubuntu/python3-cryptography 3.4.8-1ubuntu2
ubuntu/python3-dbus 1.2.18-3build1
ubuntu/python3-dev 3.10.6-1~22.04
ubuntu/python3-distro-info 1.1build1
ubuntu/python3-distro 1.7.0-1
ubuntu/python3-distutils 3.10.6-1~22.04
ubuntu/python3-gi 3.42.1-0ubuntu1
ubuntu/python3-httplib2 0.20.2-2
ubuntu/python3-importlib-metadata 4.6.4-1
ubuntu/python3-jeepney 0.7.1-3
ubuntu/python3-jwt 2.3.0-1ubuntu0.2
ubuntu/python3-keyring 23.5.0-1
ubuntu/python3-launchpadlib 1.10.16-1
ubuntu/python3-lazr.restfulclient 0.14.4-1
ubuntu/python3-lazr.uri 1.0.6-2
ubuntu/python3-lib2to3 3.10.6-1~22.04
ubuntu/python3-minimal 3.10.6-1~22.04
ubuntu/python3-more-itertools 8.10.0-2
ubuntu/python3-oauthlib 3.2.0-1ubuntu0.1
ubuntu/python3-pip 22.0.2 dfsg-1ubuntu0.3
ubuntu/python3-pkg-resources 59.6.0-1.2ubuntu0.22.04.1
ubuntu/python3-pyparsing 2.4.7-1
ubuntu/python3-secretstorage 3.3.1-1
ubuntu/python3-setuptools 59.6.0-1.2ubuntu0.22.04.1
ubuntu/python3-six 1.16.0-3ubuntu1
ubuntu/python3-software-properties 0.99.22.7
ubuntu/python3-wadllib 1.3.6-1
ubuntu/python3-wheel 0.37.1-2ubuntu0.22.04.1
ubuntu/python3-zipp 1.0.0-3
ubuntu/python3.10-dev 3.10.6-1~22.04.2ubuntu1.1
ubuntu/python3.10-minimal 3.10.6-1~22.04.2ubuntu1.1
ubuntu/python3.10 3.10.6-1~22.04.2ubuntu1.1
ubuntu/python3 3.10.6-1~22.04
ubuntu/readline-common 8.1.2-1
ubuntu/rpcsvc-proto 1.4.2-0ubuntu6
ubuntu/sed 4.8-1ubuntu2
ubuntu/sensible-utils 0.0.17
ubuntu/shared-mime-info 2.1-2
ubuntu/software-properties-common 0.99.22.7
ubuntu/systemd-sysv 249.11-0ubuntu3.9
ubuntu/systemd-timesyncd 249.11-0ubuntu3.9
ubuntu/systemd 249.11-0ubuntu3.9
ubuntu/sysvinit-utils 3.01-1ubuntu1
ubuntu/tabix 1.13 ds-2build1
ubuntu/tar 1.34 dfsg-1ubuntu0.1.22.04.1
ubuntu/ubuntu-keyring 2021.03.26
ubuntu/ucf 3.0043
ubuntu/unattended-upgrades 2.8ubuntu1
ubuntu/unzip 6.0-26ubuntu3.1
ubuntu/usrmerge 25ubuntu2
ubuntu/util-linux 2.37.2-4ubuntu3
ubuntu/uuid-runtime 2.37.2-4ubuntu3
ubuntu/wget 1.21.2-2ubuntu1
ubuntu/xdg-user-dirs 0.17-2ubuntu4
ubuntu/xz-utils 5.2.5-2ubuntu1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu9.2
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu9.2

bash 5.1.16

command-line-arguments (devel)
github.com/BurntSushi/toml v0.3.1
github.com/biogo/hts v1.4.2
github.com/brentp/bix v0.0.0-20190718140914-00aa7a7f205d
github.com/brentp/goluaez v0.0.0-20160116211227-dd35d08e32e7
github.com/brentp/irelate v0.0.1
github.com/brentp/vcfanno (devel)
github.com/brentp/vcfgo v0.0.0-20221128230736-759c0d32541e
github.com/brentp/xopen v0.0.0-20181116180855-111b45cadc7d
github.com/pkg/errors v0.9.1
github.com/yuin/gluare v0.0.0-20170607022532-d7c94f1a80ed
github.com/yuin/gopher-lua v0.0.0-20210529063254-f4c35e4016d9
stdlib 1.19.3