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Docker

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Package Usage : deb : ubuntu/libhtscodecs2

Explore the latest package usage data for ubuntu/libhtscodecs2 in the deb ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 169
Total downloads: 33,628,889

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 9 months ago - 40,063,891 downloads - 912 dependencies
bioconductor/bioconductor_docker RELEASE_3_20

Bioconductor Docker Images

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 9 months ago - 1,450,871 downloads - 1,397 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 12 months ago - 186,109 downloads - 912 dependencies
intelliseqngs/task_vcf-beagle-postproc 1.1.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 87,632 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-dbsnp 1.1.1-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 65,067 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-dbnsfp 1.3.0-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 65,014 downloads - 418 dependencies
intelliseqngs/task_vcf-anno-scores 1.2.1-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 64,005 downloads - 633 dependencies
intelliseqngs/task_vcf-anno-freq-exome 3.1.2-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 35,961 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-freq-genome 3.0.1-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 35,467 downloads - 388 dependencies
intelliseqngs/task_vcf-anno-func-var 1.6.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 3,479 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pvs1 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,617 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp1 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,452 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm5 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,473 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps1 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,514 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps3 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,508 downloads - 334 dependencies
intelliseqngs/task_vcf-acmg-bp5 2.0.2

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 11 months ago - 3,425 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm1 3.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,504 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp2 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,441 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ba1 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,319 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm2 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,200 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp4 3.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,314 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-summary 1.3.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 3,187 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp7 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,357 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bs2 2.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 3,350 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp3 3.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,278 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp3 2.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,311 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm4 2.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 3,339 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.1.6

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,735 downloads - 346 dependencies
intelliseqngs/task_vcf-split-multiallelic-grch38-no-alt 1.2.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 2,691 downloads - 333 dependencies
intelliseqngs/task_sex-check-chr-cov 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 1,957 downloads - 333 dependencies
intelliseqngs/task_bam-panel-coverage 1.0.2

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 1,941 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-civic 1.2.7

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 5 months ago - 2,601 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp4 2.0.2

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 1,698 downloads - 333 dependencies
intelliseqngs/mitolib 2.1.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 1,365 downloads - 562 dependencies
intelliseqngs/task_vcf-split-multiallelic-hg38 1.2.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 811 downloads - 333 dependencies
intelliseqngs/task_vcf-tag-inheritance 1.0.4

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 1,057 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-snpeff-grch38.107 1.1.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 6,584 downloads - 492 dependencies
intelliseqngs/annotsv-grch38 1.0.8

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 603 downloads - 449 dependencies
almahmoud/bioconductor_docker RELEASE_3_20

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 7 months ago - 1,241 downloads - 1,206 dependencies
intelliseqngs/task_vcf-split-site-only 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 322 downloads - 333 dependencies
intelliseqngs/prodia_task_phasing-eagle 1.0.1-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 549 downloads - 333 dependencies
koki/biocdev 20230818

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 301 downloads - 1,504 dependencies
gmacari/genomicutils latest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 557 downloads - 520 dependencies
intelliseqngs/prodia_task_imputing-ldproxy 1.0.4-chrY-and-the-rest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 841 downloads - 252 dependencies
intelliseqngs/task_sv-annot-filter 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 165 downloads - 388 dependencies
intelliseqngs/duphold-hg38 1.1.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 134 downloads - 273 dependencies
intelliseqngs/dragmap-grch38-no-alt 1.1.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 181 downloads - 558 dependencies
alexwaldrop/reads2variants v0.0

  • version: 1.2.2-1
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.10
Latest release: over 2 years ago - 128 downloads - 660 dependencies
intelliseqngs/task_vcf-anno-civic-evidence 1.0.13

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 3 months ago - 1,173 downloads - 333 dependencies
intelliseqngs/duphold-grch38-no-alt 1.1.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 190 downloads - 273 dependencies
koki/tensor-projects-vaccine 20221128

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 92 downloads - 1,283 dependencies
mkolmogo/hapdiff 0.9

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,921 downloads - 250 dependencies
koki/delayedtensor-experiments 20240923

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 10 months ago - 168 downloads - 1,295 dependencies
crukmi/mesa_dependencies latest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 76 downloads - 1,393 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 6 months ago - 123 downloads - 1,471 dependencies
mqmnd/samtools arm-1.13

  • version: 1.1.1-3
  • arch: arm64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 125 downloads - 120 dependencies
huitacademictechnology/fas-rstudio-general sha-47ae0c3

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 134 downloads - 1,496 dependencies
intelliseqngs/task_vcf-select-var-somatic 1.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 52 downloads - 388 dependencies
intelliseqngs/prodia_task_vcf-beagle-postproc 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 53 downloads - 388 dependencies
intelliseqngs/ubuntu-toolbox-22.04 1.0.3

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 148 downloads - 389 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 106 downloads - 1,601 dependencies
intelliseqngs/task_vcf-beagle-merge 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 71 downloads - 388 dependencies
koki/chapter3_2 20240925

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: 10 months ago - 54 downloads - 1,196 dependencies
intelliseqngs/prodia_task_mobigen-models 1.1.4

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 149 downloads - 416 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 109 downloads - 1,382 dependencies
intelliseqngs/task_json-prioritize-var-somatic 1.0.0

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 51 downloads - 388 dependencies
intelliseqngs/prodia_task_vcf-qc 1.0.7

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 79 downloads - 692 dependencies
intelliseqngs/toolbox-openjdk12 1.1.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 35 downloads - 345 dependencies
alexwaldrop/freyja v1.3.11

  • version: 1.2.2-1
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.10
Latest release: over 2 years ago - 35 downloads - 376 dependencies
koki/tensor-projects-self-incompatible 20221217

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 52 downloads - 1,264 dependencies
mqmnd/leafcutter amd-mamba

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 52 downloads - 624 dependencies
milescsmith/falco 1.2.1

  • version: 1.2.2-1
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.10
Latest release: over 2 years ago - 40 downloads - 318 dependencies
intelliseqngs/task_mt-anno 1.0.1

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 71 downloads - 646 dependencies
pedrojf/annotsv 3.2.3

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 238 downloads - 356 dependencies
koki/crandev 20230814

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 164 downloads - 1,329 dependencies
bsceapm/ahatool 2.2

  • version: 1.1.1-3
  • arch: amd64
  • upstream: htscodecs
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 204 downloads - 40 dependencies