Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

erikfas/spatialtranscriptomics : latest

Temporary Dockerfile for nf-core/spatialtranscriptomics

Ubuntu 20.04.6 LTS

Latest release: almost 2 years ago - 647 downloads - 310 dependencies

JSON

Dependencies

ubuntu/adduser 3.118ubuntu2
ubuntu/apt 2.0.9
ubuntu/base-files 11ubuntu5.7
ubuntu/base-passwd 3.5.47
ubuntu/bash 5.0-6ubuntu1.2
ubuntu/bsdutils 1:2.34-0.1ubuntu9.3
ubuntu/bzip2 1.0.8-2
ubuntu/ca-certificates 20230311ubuntu0.20.04.1
ubuntu/coreutils 8.30-3ubuntu2
ubuntu/dash 0.5.10.2-6
ubuntu/debconf 1.5.73
ubuntu/debianutils 4.9.1
ubuntu/diffutils 1:3.7-3
ubuntu/dpkg 1.19.7ubuntu3.2
ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
ubuntu/fdisk 2.34-0.1ubuntu9.3
ubuntu/findutils 4.7.0-1ubuntu1
ubuntu/gcc-10-base 10.3.0-1ubuntu1~20.04
ubuntu/git-man 1:2.25.1-1ubuntu3.11
ubuntu/git 1:2.25.1-1ubuntu3.11
ubuntu/gpgv 2.2.19-3ubuntu2.2
ubuntu/grep 3.4-1
ubuntu/gzip 1.10-0ubuntu4.1
ubuntu/hostname 3.23
ubuntu/init-system-helpers 1.57
ubuntu/libacl1 2.2.53-6
ubuntu/libapt-pkg6.0 2.0.9
ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libattr1 1:2.4.48-5
ubuntu/libaudit-common 1:2.8.5-2ubuntu6
ubuntu/libaudit1 1:2.8.5-2ubuntu6
ubuntu/libblkid1 2.34-0.1ubuntu9.3
ubuntu/libbrotli1 1.0.7-6ubuntu0.1
ubuntu/libbz2-1.0 1.0.8-2
ubuntu/libc-bin 2.31-0ubuntu9.9
ubuntu/libc6 2.31-0ubuntu9.9
ubuntu/libcap-ng0 0.7.9-2.1build1
ubuntu/libcom-err2 1.45.5-2ubuntu1.1
ubuntu/libcrypt1 1:4.4.10-10ubuntu4
ubuntu/libcurl3-gnutls 7.68.0-1ubuntu2.18
ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu2
ubuntu/libdebconfclient0 0.251ubuntu1
ubuntu/liberror-perl 0.17029-1
ubuntu/libexpat1 2.2.9-1ubuntu0.6
ubuntu/libext2fs2 1.45.5-2ubuntu1.1
ubuntu/libfdisk1 2.34-0.1ubuntu9.3
ubuntu/libffi7 3.3-4
ubuntu/libgcc-s1 10.3.0-1ubuntu1~20.04
ubuntu/libgcrypt20 1.8.5-5ubuntu1.1
ubuntu/libgdbm-compat4 1.18.1-5
ubuntu/libgdbm6 1.18.1-5
ubuntu/libgmp10 2:6.2.0 dfsg-4ubuntu0.1
ubuntu/libgnutls30 3.6.13-2ubuntu1.8
ubuntu/libgpg-error0 1.37-1
ubuntu/libgssapi-krb5-2 1.17-6ubuntu4.3
ubuntu/libgssapi3-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libhcrypto4-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libheimbase1-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libheimntlm0-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libhogweed5 3.5.1 really3.5.1-2ubuntu0.2
ubuntu/libhx509-5-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libidn2-0 2.2.0-2
ubuntu/libk5crypto3 1.17-6ubuntu4.3
ubuntu/libkeyutils1 1.6-6ubuntu1.1
ubuntu/libkrb5-26-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libkrb5-3 1.17-6ubuntu4.3
ubuntu/libkrb5support0 1.17-6ubuntu4.3
ubuntu/libldap-2.4-2 2.4.49 dfsg-2ubuntu1.9
ubuntu/libldap-common 2.4.49 dfsg-2ubuntu1.9
ubuntu/liblz4-1 1.9.2-2ubuntu0.20.04.1
ubuntu/liblzma5 5.2.4-1ubuntu1.1
ubuntu/libmount1 2.34-0.1ubuntu9.3
ubuntu/libncurses6 6.2-0ubuntu2
ubuntu/libncursesw6 6.2-0ubuntu2
ubuntu/libnettle7 3.5.1 really3.5.1-2ubuntu0.2
ubuntu/libnghttp2-14 1.40.0-1build1
ubuntu/libp11-kit0 0.23.20-1ubuntu0.1
ubuntu/libpam-modules-bin 1.3.1-5ubuntu4.6
ubuntu/libpam-modules 1.3.1-5ubuntu4.6
ubuntu/libpam-runtime 1.3.1-5ubuntu4.6
ubuntu/libpam0g 1.3.1-5ubuntu4.6
ubuntu/libpcre2-8-0 10.34-7ubuntu0.1
ubuntu/libpcre3 2:8.39-12ubuntu0.1
ubuntu/libperl5.30 5.30.0-9ubuntu0.3
ubuntu/libprocps8 2:3.3.16-1ubuntu2.3
ubuntu/libpsl5 0.21.0-1ubuntu1
ubuntu/libroken18-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2build1
ubuntu/libsasl2-2 2.1.27 dfsg-2ubuntu0.1
ubuntu/libsasl2-modules-db 2.1.27 dfsg-2ubuntu0.1
ubuntu/libseccomp2 2.5.1-1ubuntu1~20.04.2
ubuntu/libselinux1 3.0-1build2
ubuntu/libsemanage-common 3.0-1build2
ubuntu/libsemanage1 3.0-1build2
ubuntu/libsepol1 3.0-1ubuntu0.1
ubuntu/libsmartcols1 2.34-0.1ubuntu9.3
ubuntu/libsqlite3-0 3.31.1-4ubuntu0.5
ubuntu/libss2 1.45.5-2ubuntu1.1
ubuntu/libssh-4 0.9.3-2ubuntu2.2
ubuntu/libssl1.1 1.1.1f-1ubuntu2.18
ubuntu/libstdc 6 10.3.0-1ubuntu1~20.04
ubuntu/libsystemd0 245.4-4ubuntu3.21
ubuntu/libtasn1-6 4.16.0-2
ubuntu/libtinfo6 6.2-0ubuntu2
ubuntu/libudev1 245.4-4ubuntu3.21
ubuntu/libunistring2 0.9.10-2
ubuntu/libuuid1 2.34-0.1ubuntu9.3
ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libzstd1 1.4.4 dfsg-3ubuntu0.1
ubuntu/login 1:4.8.1-1ubuntu5.20.04.4
ubuntu/logsave 1.45.5-2ubuntu1.1
ubuntu/lsb-base 11.1.0ubuntu2
ubuntu/mawk 1.3.4.20200120-2
ubuntu/mount 2.34-0.1ubuntu9.3
ubuntu/ncurses-base 6.2-0ubuntu2
ubuntu/ncurses-bin 6.2-0ubuntu2
ubuntu/openssl 1.1.1f-1ubuntu2.18
ubuntu/passwd 1:4.8.1-1ubuntu5.20.04.4
ubuntu/perl-base 5.30.0-9ubuntu0.3
ubuntu/perl-modules-5.30 5.30.0-9ubuntu0.3
ubuntu/perl 5.30.0-9ubuntu0.3
ubuntu/procps 2:3.3.16-1ubuntu2.3
ubuntu/sed 4.7-1
ubuntu/sensible-utils 0.0.12 nmu1
ubuntu/sysvinit-utils 2.96-2.1ubuntu1
ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
ubuntu/tini 0.18.0-1
ubuntu/ubuntu-keyring 2020.02.11.4
ubuntu/util-linux 2.34-0.1ubuntu9.3
ubuntu/wget 1.20.3-1ubuntu2
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5

bash 5.0.17
python 3.10.10

github.com/evanw/esbuild v0.0.0-20220830001118-78a1e00b2e69
golang.org/x/sys v0.0.0-20220715151400-c0bba94af5f8

@jupyter-widgets/jupyterlab-manager 5.0.7
debug 3.2.6
js 1.0.0
jupyterlab_pygments 0.2.2
license-checker 25.0.1
nopt 4.0.1
spdx-license-ids 3.0.5
validate-npm-package-license 3.0.4

Jinja2 3.1.2
MarkupSafe 2.1.3
NaiveDE 1.2.0
Pillow 9.5.0
PyQt5-sip 12.11.0
PyQt5 5.15.7
PySocks 1.7.1
PyYAML 6.0
Pygments 2.15.1
QtPy 2.3.1
Send2Trash 1.8.2
SpatialDE 1.1.3
anndata 0.9.1
ansiwrap 0.8.4
anyio 3.7.0
argon2-cffi-bindings 21.2.0
argon2-cffi 21.3.0
asttokens 2.2.1
attrs 23.1.0
backcall 0.2.0
backports.functools-lru-cache 1.6.4
beautifulsoup4 4.12.2
black 23.3.0
bleach 6.0.0
brotlipy 0.7.0
bytecode 0.13.0.dev0
cached-property 1.5.2
certifi 2022.12.7
cffi 1.15.1
charset-normalizer 3.1.0
click 8.1.3
colorama 0.4.6
comm 0.1.3
conda-package-handling 2.0.2
conda 23.1.0
conda_package_streaming 0.7.0
contourpy 1.0.7
cryptography 40.0.1
cycler 0.11.0
debugpy 1.6.7
decorator 5.1.1
defusedxml 0.7.1
entrypoints 0.4
exceptiongroup 1.1.1
executing 1.2.0
fastjsonschema 2.17.1
flit_core 3.9.0
fonttools 4.39.4
h5py 3.8.0
html5lib 1.1
idna 3.4
igraph 0.10.3
importlib-metadata 6.6.0
importlib-resources 5.12.0
ipykernel 6.23.1
ipython-genutils 0.2.0
ipython 8.14.0
ipywidgets 8.0.6
jedi 0.18.2
joblib 1.2.0
jsonschema 4.17.3
jupyter-console 6.6.3
jupyter-events 0.6.3
jupyter 1.0.0
jupyter_client 8.2.0
jupyter_core 5.3.0
jupyter_server 2.6.0
jupyter_server_terminals 0.4.4
jupyterlab-pygments 0.2.2
jupyterlab-widgets 3.0.7
kiwisolver 1.4.4
leidenalg 0.9.1
libmambapy 1.4.1
llvmlite 0.40.0
mamba 1.4.1
matplotlib-inline 0.1.6
matplotlib 3.7.1
mistune 2.0.5
munkres 1.1.4
mypy-extensions 1.0.0
natsort 8.3.1
nbclassic 1.0.0
nbclient 0.8.0
nbconvert 7.4.0
nbformat 5.9.0
nest-asyncio 1.5.6
networkx 3.1
notebook 6.5.4
notebook_shim 0.2.3
numba 0.57.0
numpy 1.24.3
overrides 7.3.1
packaging 23.1
pandas 2.0.2
pandocfilters 1.5.0
papermill 2.3.4
parso 0.8.3
pathspec 0.11.1
patsy 0.5.3
pexpect 4.8.0
pickleshare 0.7.5
pip 23.0.1
pkgutil_resolve_name 1.3.10
platformdirs 3.5.1
pluggy 1.0.0
ply 3.11
pooch 1.7.0
prometheus-client 0.17.0
prompt-toolkit 3.0.38
psutil 5.9.5
ptyprocess 0.7.0
pure-eval 0.2.2
pyOpenSSL 23.1.1
pycosat 0.6.4
pycparser 2.21
pynndescent 0.5.10
pyparsing 3.0.9
pyrsistent 0.19.3
python-dateutil 2.8.2
python-json-logger 2.0.7
pytz 2023.3
pyzmq 25.1.0
qtconsole 5.4.3
requests 2.28.2
rfc3339-validator 0.1.4
rfc3986-validator 0.1.1
ruamel.yaml.clib 0.2.7
ruamel.yaml 0.17.21
scanpy 1.9.3
scikit-learn 1.2.2
scipy 1.10.1
seaborn 0.12.2
session-info 1.0.0
setuptools 65.6.3
sip 6.7.9
six 1.16.0
sniffio 1.3.0
soupsieve 2.3.2.post1
stack-data 0.6.2
statsmodels 0.14.0
stdlib-list 0.8.0
tenacity 8.2.2
terminado 0.17.1
texttable 1.6.7
textwrap3 0.9.2
threadpoolctl 3.1.0
tinycss2 1.2.1
toml 0.10.2
tomli 1.2.3
tomli 2.0.1
toolz 0.12.0
tornado 6.3.2
tqdm 4.65.0
traitlets 5.9.0
typing-utils 0.1.0
typing_extensions 4.6.3
tzdata 2023.3
umap-learn 0.5.3
unicodedata2 15.0.0
urllib3 1.26.15
wcwidth 0.2.6
webencodings 0.5.1
websocket-client 1.5.2
wheel 0.40.0
widgetsnbextension 4.0.7
zipp 3.15.0
zstandard 0.19.0