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biocontainers/rsem : v1.3.1dfsg-1-deb_cv1

Latest release: over 5 years ago - 7,729 downloads - 417 dependencies

JSON

Dependencies

KernSmooth 2.23-15
MASS 7.3-51.1
Matrix 1.2-15
base 3.5.2
boot 1.3-20
class 7.3-15
cluster 2.0.7-1
codetools 0.2-16
compiler 3.5.2
datasets 3.5.2
foreign 0.8-71
grDevices 3.5.2
graphics 3.5.2
grid 3.5.2
lattice 0.20-38
methods 3.5.2
mgcv 1.8-27
nlme 3.1-137
nnet 7.3-12
parallel 3.5.2
rpart 4.1-13
spatial 7.3-11
splines 3.5.2
stats4 3.5.2
stats 3.5.2
survival 2.43-3
tcltk 3.5.2
tools 3.5.2
translations 3.5.2
utils 3.5.2

debian/adduser 3.118
debian/apt 1.8.2
debian/base-files 10.3
debian/base-passwd 3.5.46
debian/bash 5.0-4
debian/binutils-common 2.31.1-16
debian/binutils-x86-64-linux-gnu 2.31.1-16
debian/binutils 2.31.1-16
debian/bowtie 1.2.2 dfsg-4
debian/bsdutils 1:2.33.1-0.1
debian/build-essential 12.6
debian/bzip2-doc 1.0.6-9.2~deb10u1
debian/bzip2 1.0.6-9.2~deb10u1
debian/ca-certificates 20190110
debian/coreutils 8.30-3
debian/cpp-8 8.3.0-6
debian/cpp 4:8.3.0-1
debian/dash 0.5.10.2-5
debian/dbus 1.12.16-1
debian/debconf 1.5.71
debian/debian-archive-keyring 2019.1
debian/debianutils 4.8.6.1
debian/diffutils 1:3.7-3
debian/dirmngr 2.2.17-3~bpo10 2
debian/dpkg-dev 1.19.7
debian/dpkg 1.19.7
debian/e2fsprogs 1.44.5-1
debian/fakeroot 1.23-1
debian/fdisk 2.33.1-0.1
debian/file 1:5.35-4
debian/findutils 4.6.0 git 20190209-2
debian/fontconfig-config 2.13.1-2
debian/fontconfig 2.13.1-2
debian/fonts-dejavu-core 2.37-1
debian/g -8 8.3.0-6
debian/g 4:8.3.0-1
debian/gcc-8-base 8.3.0-6
debian/gcc-8 8.3.0-6
debian/gcc 4:8.3.0-1
debian/gfortran-8 8.3.0-6
debian/gfortran 4:8.3.0-1
debian/gnupg-l10n 2.2.17-3~bpo10 2
debian/gnupg-utils 2.2.17-3~bpo10 2
debian/gnupg 2.2.17-3~bpo10 2
debian/gpg-agent 2.2.17-3~bpo10 2
debian/gpg-wks-client 2.2.17-3~bpo10 2
debian/gpg-wks-server 2.2.17-3~bpo10 2
debian/gpg 2.2.17-3~bpo10 2
debian/gpgconf 2.2.17-3~bpo10 2
debian/gpgsm 2.2.17-3~bpo10 2
debian/gpgv 2.2.17-3~bpo10 2
debian/grep 3.3-1
debian/gzip 1.9-3
debian/hostname 3.21
debian/icu-devtools 63.1-6
debian/init-system-helpers 1.56 nmu1
debian/iproute2 4.20.0-2
debian/iputils-ping 3:20180629-2
debian/krb5-locales 1.17-3
debian/libacl1 2.2.53-4
debian/libalgorithm-diff-perl 1.19.03-2
debian/libalgorithm-diff-xs-perl 0.04-5 b1
debian/libalgorithm-merge-perl 0.08-3
debian/libapparmor1 2.13.2-10
debian/libapt-pkg5.0 1.8.2
debian/libasan5 8.3.0-6
debian/libassuan0 2.5.2-1
debian/libatomic1 8.3.0-6
debian/libattr1 1:2.4.48-4
debian/libaudit-common 1:2.8.4-3
debian/libaudit1 1:2.8.4-3
debian/libauthen-sasl-perl 2.1600-1
debian/libbinutils 2.31.1-16
debian/libblas-dev 3.8.0-2
debian/libblas3 3.8.0-2
debian/libblkid1 2.33.1-0.1
debian/libbsd0 0.9.1-2
debian/libbz2-1.0 1.0.6-9.2~deb10u1
debian/libbz2-dev 1.0.6-9.2~deb10u1
debian/libc-bin 2.28-10
debian/libc-dev-bin 2.28-10
debian/libc6-dev 2.28-10
debian/libc6 2.28-10
debian/libcairo2 1.16.0-4
debian/libcap-ng0 0.7.9-2
debian/libcap2-bin 1:2.25-2
debian/libcap2 1:2.25-2
debian/libcc1-0 8.3.0-6
debian/libcom-err2 1.44.5-1
debian/libcurl3-gnutls 7.64.0-4
debian/libcurl4 7.64.0-4
debian/libdata-dump-perl 1.23-1
debian/libdatrie1 0.2.12-2
debian/libdb5.3 5.3.28 dfsg1-0.5
debian/libdbus-1-3 1.12.16-1
debian/libdebconfclient0 0.249
debian/libdeflate0 1.2-1
debian/libdpkg-perl 1.19.7
debian/libdrm-amdgpu1 2.4.97-1
debian/libdrm-common 2.4.97-1
debian/libdrm-intel1 2.4.97-1
debian/libdrm-nouveau2 2.4.97-1
debian/libdrm-radeon1 2.4.97-1
debian/libdrm2 2.4.97-1
debian/libedit2 3.1-20181209-1
debian/libelf1 0.176-1.1
debian/libencode-locale-perl 1.05-1
debian/libexpat1 2.2.6-2 deb10u1
debian/libext2fs2 1.44.5-1
debian/libfakeroot 1.23-1
debian/libfdisk1 2.33.1-0.1
debian/libffi6 3.2.1-9
debian/libfile-basedir-perl 0.08-1
debian/libfile-desktopentry-perl 0.22-1
debian/libfile-fcntllock-perl 0.22-3 b5
debian/libfile-listing-perl 6.04-1
debian/libfile-mimeinfo-perl 0.29-1
debian/libfont-afm-perl 1.20-2
debian/libfontconfig1 2.13.1-2
debian/libfontenc1 1:1.1.3-1 b2
debian/libfreetype6 2.9.1-3
debian/libfribidi0 1.0.5-3.1
debian/libgcc-8-dev 8.3.0-6
debian/libgcc1 1:8.3.0-6
debian/libgcrypt20 1.8.4-5
debian/libgdbm-compat4 1.18.1-4
debian/libgdbm6 1.18.1-4
debian/libgfortran-8-dev 8.3.0-6
debian/libgfortran5 8.3.0-6
debian/libgl1-mesa-dri 18.3.6-2
debian/libgl1 1.1.0-1
debian/libglapi-mesa 18.3.6-2
debian/libglib2.0-0 2.58.3-2 deb10u1
debian/libglib2.0-data 2.58.3-2 deb10u1
debian/libglvnd0 1.1.0-1
debian/libglx-mesa0 18.3.6-2
debian/libglx0 1.1.0-1
debian/libgmp10 2:6.1.2 dfsg-4
debian/libgnutls30 3.6.7-4
debian/libgomp1 8.3.0-6
debian/libgpg-error0 1.35-1
debian/libgpm2 1.20.7-5
debian/libgraphite2-3 1.3.13-7
debian/libgssapi-krb5-2 1.17-3
debian/libharfbuzz0b 2.3.1-1
debian/libhogweed4 3.4.1-1
debian/libhtml-form-perl 6.03-1
debian/libhtml-format-perl 2.12-1
debian/libhtml-parser-perl 3.72-3 b3
debian/libhtml-tagset-perl 3.20-3
debian/libhtml-tree-perl 5.07-2
debian/libhts2 1.9-11
debian/libhttp-cookies-perl 6.04-1
debian/libhttp-daemon-perl 6.01-3
debian/libhttp-date-perl 6.02-1
debian/libhttp-message-perl 6.18-1
debian/libhttp-negotiate-perl 6.01-1
debian/libice6 2:1.0.9-2
debian/libicu-dev 63.1-6
debian/libicu63 63.1-6
debian/libidn2-0 2.0.5-1
debian/libio-html-perl 1.001-1
debian/libio-socket-ssl-perl 2.060-3
debian/libio-stringy-perl 2.111-3
debian/libipc-system-simple-perl 1.25-4
debian/libisl19 0.20-2
debian/libitm1 8.3.0-6
debian/libjbig0 2.1-3.1 b2
debian/libjpeg-dev 1:1.5.2-2
debian/libjpeg62-turbo-dev 1:1.5.2-2 b1
debian/libjpeg62-turbo 1:1.5.2-2 b1
debian/libk5crypto3 1.17-3
debian/libkeyutils1 1.6-6
debian/libkrb5-3 1.17-3
debian/libkrb5support0 1.17-3
debian/libksba8 1.3.5-2
debian/liblapack-dev 3.8.0-2
debian/liblapack3 3.8.0-2
debian/libldap-2.4-2 2.4.48 dfsg-1~bpo10 1
debian/libldap-common 2.4.48 dfsg-1~bpo10 1
debian/libllvm7 1:7.0.1-8
debian/liblocale-gettext-perl 1.07-3 b4
debian/liblsan0 8.3.0-6
debian/liblwp-mediatypes-perl 6.02-1
debian/liblwp-protocol-https-perl 6.07-2
debian/liblz4-1 1.8.3-1
debian/liblzma-dev 5.2.4-1
debian/liblzma5 5.2.4-1
debian/libmagic-mgc 1:5.35-4
debian/libmagic1 1:5.35-4
debian/libmailtools-perl 2.18-1
debian/libmnl0 1.0.4-2
debian/libmount1 2.33.1-0.1
debian/libmpc3 1.1.0-1
debian/libmpfr6 4.0.2-1
debian/libmpx2 8.3.0-6
debian/libncurses-dev 6.1 20181013-2 deb10u1
debian/libncurses5-dev 6.1 20181013-2 deb10u1
debian/libncurses6 6.1 20181013-2 deb10u1
debian/libncursesw6 6.1 20181013-2 deb10u1
debian/libnet-dbus-perl 1.1.0-5 b1
debian/libnet-http-perl 6.18-1
debian/libnet-smtp-ssl-perl 1.04-1
debian/libnet-ssleay-perl 1.85-2 b1
debian/libnettle6 3.4.1-1
debian/libnghttp2-14 1.36.0-2 deb10u1
debian/libnpth0 1.6-1
debian/libp11-kit0 0.23.15-2
debian/libpam-modules-bin 1.3.1-5
debian/libpam-modules 1.3.1-5
debian/libpam-runtime 1.3.1-5
debian/libpam0g 1.3.1-5
debian/libpango-1.0-0 1.42.4-7~deb10u1
debian/libpangocairo-1.0-0 1.42.4-7~deb10u1
debian/libpangoft2-1.0-0 1.42.4-7~deb10u1
debian/libpaper-utils 1.1.28
debian/libpaper1 1.1.28
debian/libpciaccess0 0.14-1
debian/libpcre16-3 2:8.39-12
debian/libpcre3-dev 2:8.39-12
debian/libpcre32-3 2:8.39-12
debian/libpcre3 2:8.39-12
debian/libpcrecpp0v5 2:8.39-12
debian/libperl5.28 5.28.1-6
debian/libpixman-1-0 0.36.0-1
debian/libpng-dev 1.6.36-6
debian/libpng-tools 1.6.36-6
debian/libpng16-16 1.6.36-6
debian/libpsl5 0.20.2-2
debian/libpython-stdlib 2.7.16-1
debian/libpython2-stdlib 2.7.16-1
debian/libpython2.7-minimal 2.7.16-2
debian/libpython2.7-stdlib 2.7.16-2
debian/libquadmath0 8.3.0-6
debian/libreadline-dev 7.0-5
debian/libreadline7 7.0-5
debian/librtmp1 2.4 20151223.gitfa8646d.1-2
debian/libsasl2-2 2.1.27 dfsg-1
debian/libsasl2-modules-db 2.1.27 dfsg-1
debian/libsasl2-modules 2.1.27 dfsg-1
debian/libseccomp2 2.3.3-4
debian/libselinux1 2.8-1 b1
debian/libsemanage-common 2.8-2
debian/libsemanage1 2.8-2
debian/libsensors-config 1:3.5.0-3
debian/libsensors5 1:3.5.0-3
debian/libsepol1 2.8-1
debian/libsm6 2:1.2.3-1
debian/libsmartcols1 2.33.1-0.1
debian/libsqlite3-0 3.27.2-3
debian/libss2 1.44.5-1
debian/libssh2-1 1.8.0-2.1
debian/libssl1.1 1.1.1d-0 deb10u2
debian/libstdc -8-dev 8.3.0-6
debian/libstdc 6 8.3.0-6
debian/libsystemd0 241-5
debian/libtasn1-6 4.13-3
debian/libtbb2 2018~U6-4
debian/libtcl8.6 8.6.9 dfsg-2
debian/libtext-iconv-perl 1.7-5 b7
debian/libthai-data 0.1.28-2
debian/libthai0 0.1.28-2
debian/libtie-ixhash-perl 1.23-2
debian/libtiff5 4.0.10-4
debian/libtimedate-perl 2.3000-2
debian/libtinfo6 6.1 20181013-2 deb10u1
debian/libtk8.6 8.6.9-2
debian/libtry-tiny-perl 0.30-1
debian/libtsan0 8.3.0-6
debian/libubsan1 8.3.0-6
debian/libudev1 241-5
debian/libunistring2 0.9.10-1
debian/liburi-perl 1.76-1
debian/libuuid1 2.33.1-0.1
debian/libwebp6 0.6.1-2
debian/libwww-perl 6.36-2
debian/libwww-robotrules-perl 6.02-1
debian/libx11-6 2:1.6.7-1
debian/libx11-data 2:1.6.7-1
debian/libx11-protocol-perl 0.56-7
debian/libx11-xcb1 2:1.6.7-1
debian/libxau6 1:1.0.8-1 b2
debian/libxaw7 2:1.0.13-1 b2
debian/libxcb-dri2-0 1.13.1-2
debian/libxcb-dri3-0 1.13.1-2
debian/libxcb-glx0 1.13.1-2
debian/libxcb-present0 1.13.1-2
debian/libxcb-render0 1.13.1-2
debian/libxcb-shape0 1.13.1-2
debian/libxcb-shm0 1.13.1-2
debian/libxcb-sync1 1.13.1-2
debian/libxcb1 1.13.1-2
debian/libxcomposite1 1:0.4.4-2
debian/libxcursor1 1:1.1.15-2
debian/libxdamage1 1:1.1.4-3 b3
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxfixes3 1:5.0.3-1
debian/libxft2 2.3.2-2
debian/libxi6 2:1.7.9-1
debian/libxinerama1 2:1.1.4-2
debian/libxml-parser-perl 2.44-4
debian/libxml-twig-perl 1:3.50-1.1
debian/libxml-xpathengine-perl 0.14-1
debian/libxml2 2.9.4 dfsg1-7 b3
debian/libxmu6 2:1.1.2-2 b3
debian/libxmuu1 2:1.1.2-2 b3
debian/libxpm4 1:3.5.12-1
debian/libxrandr2 2:1.5.1-1
debian/libxrender1 1:0.9.10-1
debian/libxshmfence1 1.3-1
debian/libxss1 1:1.2.3-1
debian/libxt6 1:1.1.5-1 b3
debian/libxtables12 1.8.2-4
debian/libxtst6 2:1.2.3-1
debian/libxv1 2:1.0.11-1
debian/libxxf86dga1 2:1.1.4-1 b3
debian/libxxf86vm1 1:1.1.4-1 b2
debian/libzstd1 1.3.8 dfsg-3
debian/linux-libc-dev 5.2.17-1~bpo10 1
debian/login 1:4.5-1.1
debian/lsb-base 10.2019051400
debian/make 4.2.1-1.2
debian/manpages-dev 5.02-1~bpo10 1
debian/manpages 5.02-1~bpo10 1
debian/mawk 1.3.3-17 b3
debian/mime-support 3.62
debian/mount 2.33.1-0.1
debian/ncurses-base 6.1 20181013-2
debian/ncurses-bin 6.1 20181013-2
debian/netbase 5.6
debian/openssl 1.1.1d-0 deb10u2
debian/passwd 1:4.5-1.1
debian/patch 2.7.6-3 deb10u1
debian/perl-base 5.28.1-6
debian/perl-modules-5.28 5.28.1-6
debian/perl-openssl-defaults 3
debian/perl 5.28.1-6
debian/pinentry-curses 1.1.0-2
debian/pkg-config 0.29-6
debian/publicsuffix 20190415.1030-1
debian/python-minimal 2.7.16-1
debian/python2-minimal 2.7.16-1
debian/python2.7-minimal 2.7.16-2
debian/python2.7 2.7.16-2
debian/python2 2.7.16-1
debian/python 2.7.16-1
debian/r-base-core 3.5.2-1
debian/r-base-dev 3.5.2-1
debian/r-cran-boot 1.3-20-2
debian/r-cran-class 7.3-15-1
debian/r-cran-cluster 2.0.7-1-1 b3
debian/r-cran-codetools 0.2-16-1
debian/r-cran-foreign 0.8.71-1
debian/r-cran-kernsmooth 2.23-15-3 b4
debian/r-cran-lattice 0.20-38-1
debian/r-cran-mass 7.3-51.1-1
debian/r-cran-matrix 1.2-15-1
debian/r-cran-mgcv 1.8-27-1
debian/r-cran-nlme 3.1.137-1 b3
debian/r-cran-nnet 7.3-12-2 b2
debian/r-cran-rpart 4.1-13-1 b1
debian/r-cran-spatial 7.3-11-2 b2
debian/r-cran-survival 2.43-3-1
debian/r-doc-html 3.5.2-1
debian/r-recommended 3.5.2-1
debian/readline-common 7.0-5
debian/rsem 1.3.1 dfsg-1
debian/sed 4.7-1
debian/sensible-utils 0.0.12
debian/shared-mime-info 1.10-1
debian/sysvinit-utils 2.93-8
debian/tar 1.30 dfsg-6
debian/tzdata 2019a-1
debian/ucf 3.0038 nmu1
debian/unzip 6.0-23 deb10u1
debian/util-linux 2.33.1-0.1
debian/x11-common 1:7.7 19
debian/x11-utils 7.7 4
debian/x11-xserver-utils 7.7 8
debian/xauth 1:1.0.10-1
debian/xdg-user-dirs 0.17-2
debian/xdg-utils 1.1.3-1
debian/xz-utils 5.2.4-1
debian/zip 3.0-11 b1
debian/zlib1g-dev 1:1.2.11.dfsg-1
debian/zlib1g 1:1.2.11.dfsg-1