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xuagu37/alphafold : 2.3.1

Ubuntu 18.04.6 LTS

Latest release: over 1 year ago - 58 downloads - 82 dependencies

JSON

Dependencies

ubuntu/adduser 3.116ubuntu1
ubuntu/apt 1.6.14
ubuntu/aria2 1.33.1-1
ubuntu/base-files 10.1ubuntu2.11
ubuntu/base-passwd 3.5.44
ubuntu/bash 4.4.18-2ubuntu1.3
ubuntu/binutils-common 2.30-21ubuntu1~18.04.8
ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04.8
ubuntu/binutils 2.30-21ubuntu1~18.04.8
ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.7
ubuntu/build-essential 12.4ubuntu1
ubuntu/bzip2 1.0.6-8.1ubuntu0.2
ubuntu/ca-certificates 20211016~18.04.1
ubuntu/cmake-data 3.10.2-1ubuntu2.18.04.2
ubuntu/cmake 3.10.2-1ubuntu2.18.04.2
ubuntu/coreutils 8.28-1ubuntu1
ubuntu/cpp-7 7.5.0-3ubuntu1~18.04
ubuntu/cpp 4:7.4.0-1ubuntu2.3
ubuntu/cuda-command-line-tools-11-1 11.1.1-1
ubuntu/cuda-compat-11-1 455.45.01-1
ubuntu/cuda-cudart-11-1 11.1.74-1
ubuntu/cuda-cudart-dev-11-1 11.1.74-1
ubuntu/cuda-cuobjdump-11-1 11.1.74-1
ubuntu/cuda-cupti-11-1 11.1.105-1
ubuntu/cuda-cupti-dev-11-1 11.1.105-1
ubuntu/cuda-driver-dev-11-1 11.1.74-1
ubuntu/cuda-gdb-11-1 11.1.105-1
ubuntu/cuda-libraries-11-1 11.1.1-1
ubuntu/cuda-memcheck-11-1 11.1.105-1
ubuntu/cuda-nvcc-11-1 11.1.105-1
ubuntu/cuda-nvdisasm-11-1 11.1.74-1
ubuntu/cuda-nvprof-11-1 11.1.105-1
ubuntu/cuda-nvrtc-11-1 11.1.105-1
ubuntu/cuda-nvtx-11-1 11.1.74-1
ubuntu/cuda-sanitizer-11-1 11.1.105-1
ubuntu/dash 0.5.8-2.10
ubuntu/debconf 1.5.66ubuntu1
ubuntu/debianutils 4.8.4
ubuntu/diffutils 1:3.6-1
ubuntu/dirmngr 2.2.4-1ubuntu1.6
ubuntu/dpkg-dev 1.19.0.5ubuntu2.4
ubuntu/dpkg 1.19.0.5ubuntu2.4
ubuntu/e2fsprogs 1.44.1-1ubuntu1.4
ubuntu/fdisk 2.31.1-0.4ubuntu3.7
ubuntu/findutils 4.6.0 git 20170828-2
ubuntu/g -7 7.5.0-3ubuntu1~18.04
ubuntu/g 4:7.4.0-1ubuntu2.3
ubuntu/gcc-7-base 7.5.0-3ubuntu1~18.04
ubuntu/gcc-7 7.5.0-3ubuntu1~18.04
ubuntu/gcc-8-base 8.4.0-1ubuntu1~18.04
ubuntu/gcc 4:7.4.0-1ubuntu2.3
ubuntu/git-man 1:2.17.1-1ubuntu0.17
ubuntu/git 1:2.17.1-1ubuntu0.17
ubuntu/gnupg-l10n 2.2.4-1ubuntu1.6
ubuntu/gnupg-utils 2.2.4-1ubuntu1.6
ubuntu/gnupg2 2.2.4-1ubuntu1.6
ubuntu/gnupg 2.2.4-1ubuntu1.6
ubuntu/gpg-agent 2.2.4-1ubuntu1.6
ubuntu/gpg-wks-client 2.2.4-1ubuntu1.6
ubuntu/gpg-wks-server 2.2.4-1ubuntu1.6
ubuntu/gpg 2.2.4-1ubuntu1.6
ubuntu/gpgconf 2.2.4-1ubuntu1.6
ubuntu/gpgsm 2.2.4-1ubuntu1.6
ubuntu/gpgv 2.2.4-1ubuntu1.6
ubuntu/grep 3.1-2build1
ubuntu/gzip 1.6-5ubuntu1.2
ubuntu/hmmer 3.1b2 dfsg-5ubuntu1
ubuntu/hostname 3.20
ubuntu/init-system-helpers 1.51
ubuntu/kalign 1:2.03 20110620-4
ubuntu/libacl1 2.2.52-3build1
ubuntu/libapt-pkg5.0 1.6.14
ubuntu/libarchive13 3.2.2-3.1ubuntu0.7
ubuntu/libasan4 7.5.0-3ubuntu1~18.04
ubuntu/libasn1-8-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libassuan0 2.5.1-2
ubuntu/libatomic1 8.4.0-1ubuntu1~18.04
ubuntu/libattr1 1:2.4.47-2build1
ubuntu/libaudit-common 1:2.8.2-1ubuntu1.1
ubuntu/libaudit1 1:2.8.2-1ubuntu1.1
ubuntu/libbinutils 2.30-21ubuntu1~18.04.8
ubuntu/libblkid1 2.31.1-0.4ubuntu3.7
ubuntu/libbz2-1.0 1.0.6-8.1ubuntu0.2
ubuntu/libc-ares2 1.14.0-1ubuntu0.2
ubuntu/libc-bin 2.27-3ubuntu1.6
ubuntu/libc-dev-bin 2.27-3ubuntu1.6
ubuntu/libc6-dev 2.27-3ubuntu1.6
ubuntu/libc6 2.27-3ubuntu1.6
ubuntu/libcap-ng0 0.7.7-3.1
ubuntu/libcc1-0 8.4.0-1ubuntu1~18.04
ubuntu/libcilkrts5 7.5.0-3ubuntu1~18.04
ubuntu/libcom-err2 1.44.1-1ubuntu1.4
ubuntu/libcublas-11-1 11.3.0.106-1
ubuntu/libcudnn8 8.0.5.39-1 cuda11.1
ubuntu/libcufft-11-1 10.3.0.105-1
ubuntu/libcurand-11-1 10.2.2.105-1
ubuntu/libcurl3-gnutls 7.58.0-2ubuntu3.23
ubuntu/libcurl4 7.58.0-2ubuntu3.23
ubuntu/libcusolver-11-1 11.0.1.105-1
ubuntu/libcusparse-11-1 11.3.0.10-1
ubuntu/libdb5.3 5.3.28-13.1ubuntu1.1
ubuntu/libdebconfclient0 0.213ubuntu1
ubuntu/libdivsufsort3 2.0.1-3
ubuntu/libdpkg-perl 1.19.0.5ubuntu2.4
ubuntu/liberror-perl 0.17025-1
ubuntu/libexpat1 2.2.5-3ubuntu0.9
ubuntu/libext2fs2 1.44.1-1ubuntu1.4
ubuntu/libfdisk1 2.31.1-0.4ubuntu3.7
ubuntu/libffi6 3.2.1-8
ubuntu/libgcc-7-dev 7.5.0-3ubuntu1~18.04
ubuntu/libgcc1 1:8.4.0-1ubuntu1~18.04
ubuntu/libgcrypt20 1.8.1-4ubuntu1.3
ubuntu/libgdbm-compat4 1.14.1-6
ubuntu/libgdbm5 1.14.1-6
ubuntu/libgmp10 2:6.1.2 dfsg-2ubuntu0.1
ubuntu/libgnutls30 3.5.18-1ubuntu1.6
ubuntu/libgomp1 8.4.0-1ubuntu1~18.04
ubuntu/libgpg-error0 1.27-6
ubuntu/libgssapi-krb5-2 1.16-2ubuntu0.3
ubuntu/libgssapi3-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libhcrypto4-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libheimbase1-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libheimntlm0-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libhogweed4 3.4.1-0ubuntu0.18.04.1
ubuntu/libhx509-5-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libicu60 60.2-3ubuntu3.2
ubuntu/libidn2-0 2.0.4-1.1ubuntu0.2
ubuntu/libisl19 0.19-1
ubuntu/libitm1 8.4.0-1ubuntu1~18.04
ubuntu/libjsoncpp1 1.7.4-3
ubuntu/libk5crypto3 1.16-2ubuntu0.3
ubuntu/libkeyutils1 1.5.9-9.2ubuntu2.1
ubuntu/libkrb5-26-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libkrb5-3 1.16-2ubuntu0.3
ubuntu/libkrb5support0 1.16-2ubuntu0.3
ubuntu/libksba8 1.3.5-2ubuntu0.18.04.1
ubuntu/libldap-2.4-2 2.4.45 dfsg-1ubuntu1.11
ubuntu/libldap-common 2.4.45 dfsg-1ubuntu1.11
ubuntu/liblsan0 8.4.0-1ubuntu1~18.04
ubuntu/liblz4-1 0.0~r131-2ubuntu3.1
ubuntu/liblzma5 5.2.2-1.3ubuntu0.1
ubuntu/liblzo2-2 2.08-1.2
ubuntu/libmount1 2.31.1-0.4ubuntu3.7
ubuntu/libmpc3 1.1.0-1
ubuntu/libmpfr6 4.0.1-1
ubuntu/libmpx2 8.4.0-1ubuntu1~18.04
ubuntu/libnccl2 2.8.4-1 cuda11.1
ubuntu/libncurses5 6.1-1ubuntu1.18.04
ubuntu/libncursesw5 6.1-1ubuntu1.18.04
ubuntu/libnettle6 3.4.1-0ubuntu0.18.04.1
ubuntu/libnghttp2-14 1.30.0-1ubuntu1
ubuntu/libnpp-11-1 11.1.2.301-1
ubuntu/libnpth0 1.5-3
ubuntu/libnvjpeg-11-1 11.3.0.105-1
ubuntu/libp11-kit0 0.23.9-2ubuntu0.1
ubuntu/libpam-modules-bin 1.1.8-3.6ubuntu2.18.04.3
ubuntu/libpam-modules 1.1.8-3.6ubuntu2.18.04.3
ubuntu/libpam-runtime 1.1.8-3.6ubuntu2.18.04.3
ubuntu/libpam0g 1.1.8-3.6ubuntu2.18.04.3
ubuntu/libpcre3 2:8.39-9ubuntu0.1
ubuntu/libperl5.26 5.26.1-6ubuntu0.6
ubuntu/libprocps6 2:3.3.12-3ubuntu1.2
ubuntu/libpsl5 0.19.1-5build1
ubuntu/libquadmath0 8.4.0-1ubuntu1~18.04
ubuntu/libreadline7 7.0-3
ubuntu/librhash0 1.3.6-2
ubuntu/libroken18-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-1
ubuntu/libsasl2-2 2.1.27~101-g0780600 dfsg-3ubuntu2.4
ubuntu/libsasl2-modules-db 2.1.27~101-g0780600 dfsg-3ubuntu2.4
ubuntu/libseccomp2 2.5.1-1ubuntu1~18.04.2
ubuntu/libselinux1 2.7-2build2
ubuntu/libsemanage-common 2.7-2build2
ubuntu/libsemanage1 2.7-2build2
ubuntu/libsepol1 2.7-1ubuntu0.1
ubuntu/libsmartcols1 2.31.1-0.4ubuntu3.7
ubuntu/libsqlite3-0 3.22.0-1ubuntu0.6
ubuntu/libss2 1.44.1-1ubuntu1.4
ubuntu/libssl1.1 1.1.1-1ubuntu2.1~18.04.20
ubuntu/libstdc -7-dev 7.5.0-3ubuntu1~18.04
ubuntu/libstdc 6 8.4.0-1ubuntu1~18.04
ubuntu/libsystemd0 237-3ubuntu10.56
ubuntu/libtasn1-6 4.13-2
ubuntu/libtinfo5 6.1-1ubuntu1.18.04
ubuntu/libtsan0 8.4.0-1ubuntu1~18.04
ubuntu/libubsan0 7.5.0-3ubuntu1~18.04
ubuntu/libudev1 237-3ubuntu10.56
ubuntu/libunistring2 0.9.9-0ubuntu2
ubuntu/libuuid1 2.31.1-0.4ubuntu3.7
ubuntu/libuv1 1.18.0-3
ubuntu/libwind0-heimdal 7.5.0 dfsg-1ubuntu0.1
ubuntu/libxml2 2.9.4 dfsg1-6.1ubuntu1.8
ubuntu/libzstd1 1.3.3 dfsg-2ubuntu1.2
ubuntu/linux-libc-dev 4.15.0-206.217
ubuntu/login 1:4.5-1ubuntu2.3
ubuntu/lsb-base 9.20170808ubuntu1
ubuntu/make 4.1-9.1ubuntu1
ubuntu/mawk 1.3.3-17ubuntu3
ubuntu/mount 2.31.1-0.4ubuntu3.7
ubuntu/multiarch-support 2.27-3ubuntu1.6
ubuntu/nano 2.9.3-2
ubuntu/ncurses-base 6.1-1ubuntu1.18.04
ubuntu/ncurses-bin 6.1-1ubuntu1.18.04
ubuntu/openssl 1.1.1-1ubuntu2.1~18.04.20
ubuntu/passwd 1:4.5-1ubuntu2.3
ubuntu/patch 2.7.6-2ubuntu1.1
ubuntu/perl-base 5.26.1-6ubuntu0.6
ubuntu/perl-modules-5.26 5.26.1-6ubuntu0.6
ubuntu/perl 5.26.1-6ubuntu0.6
ubuntu/pinentry-curses 1.1.0-1
ubuntu/procps 2:3.3.12-3ubuntu1.2
ubuntu/readline-common 7.0-3
ubuntu/sed 4.4-2
ubuntu/sensible-utils 0.0.12
ubuntu/sysvinit-utils 2.88dsf-59.10ubuntu1
ubuntu/tar 1.29b-2ubuntu0.3
ubuntu/tzdata 2022g-0ubuntu0.18.04
ubuntu/ubuntu-keyring 2018.09.18.1~18.04.2
ubuntu/util-linux 2.31.1-0.4ubuntu3.7
ubuntu/wget 1.19.4-1ubuntu2.2
ubuntu/xz-utils 5.2.2-1.3ubuntu0.1
ubuntu/zlib1g 1:1.2.11.dfsg-0ubuntu2.2

python 3.8.12

Keras-Preprocessing 1.1.2
Markdown 3.4.1
MarkupSafe 2.1.2
OpenMM 7.5.1
PySocks 1.7.1
PyYAML 6.0
Werkzeug 2.2.3
absl-py 1.0.0
astunparse 1.6.3
biopython 1.79
cachetools 5.3.0
certifi 2022.12.7
cffi 1.15.0
charset-normalizer 2.0.4
chex 0.0.7
colorama 0.4.6
conda-content-trust 0.1.3
conda-package-handling 1.8.1
conda 23.1.0
contextlib2 21.6.0
cryptography 38.0.4
dm-haiku 0.0.9
dm-tree 0.1.6
docker 5.0.0
flatbuffers 1.12
gast 0.4.0
google-auth-oauthlib 0.4.6
google-auth 2.16.2
google-pasta 0.2.0
grpcio 1.51.3
h5py 3.8.0
idna 3.4
immutabledict 2.0.0
importlib-metadata 6.0.0
jax 0.3.25
jaxlib 0.3.25 cuda11.cudnn805
jmp 0.0.4
keras 2.9.0
libclang 15.0.6.1
ml-collections 0.1.0
mock 5.0.1
numpy 1.21.6
oauthlib 3.2.2
opt-einsum 3.3.0
packaging 23.0
pandas 1.3.4
pdbfixer 1.7
pip 23.0.1
pluggy 1.0.0
protobuf 3.20.1
pyOpenSSL 22.0.0
pyasn1-modules 0.2.8
pyasn1 0.4.8
pycosat 0.6.3
pycparser 2.21
python-dateutil 2.8.2
pytz 2022.7.1
requests-oauthlib 1.3.1
requests 2.28.2
rsa 4.9
ruamel.yaml 0.16.0
scipy 1.7.0
setuptools 67.5.0
six 1.16.0
tabulate 0.9.0
tensorboard-data-server 0.6.1
tensorboard-plugin-wit 1.8.1
tensorboard 2.9.0
tensorflow-cpu 2.9.0
tensorflow-estimator 2.9.0
tensorflow-io-gcs-filesystem 0.31.0
termcolor 2.2.0
toolz 0.12.0
tqdm 4.65.0
typing_extensions 4.5.0
urllib3 1.25.8
websocket-client 1.5.1
wheel 0.37.1
wrapt 1.15.0
zipp 3.15.0