nfcore/proteinfold_colabfold : dev
Ubuntu 18.04.6 LTS
Latest release: about 2 years ago - 8,393 downloads - 256 dependencies
JSONDependencies
- ubuntu/adduser 3.116ubuntu1
- ubuntu/apt 1.6.14
- ubuntu/base-files 10.1ubuntu2.11
- ubuntu/base-passwd 3.5.44
- ubuntu/bash 4.4.18-2ubuntu1.2
- ubuntu/binutils-common 2.30-21ubuntu1~18.04.8
- ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04.8
- ubuntu/binutils 2.30-21ubuntu1~18.04.8
- ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.7
- ubuntu/build-essential 12.4ubuntu1
- ubuntu/bzip2 1.0.6-8.1ubuntu0.2
- ubuntu/ca-certificates 20210119~18.04.2
- ubuntu/cmake-data 3.10.2-1ubuntu2.18.04.2
- ubuntu/cmake 3.10.2-1ubuntu2.18.04.2
- ubuntu/coreutils 8.28-1ubuntu1
- ubuntu/cpp-7 7.5.0-3ubuntu1~18.04
- ubuntu/cpp 4:7.4.0-1ubuntu2.3
- ubuntu/cuda-cccl-11-4 11.4.122-1
- ubuntu/cuda-command-line-tools-11-4 11.4.4-1
- ubuntu/cuda-compat-11-4 470.82.01-1
- ubuntu/cuda-cudart-11-4 11.4.148-1
- ubuntu/cuda-cudart-dev-11-4 11.4.148-1
- ubuntu/cuda-cuobjdump-11-4 11.4.120-1
- ubuntu/cuda-cupti-11-4 11.4.120-1
- ubuntu/cuda-cupti-dev-11-4 11.4.120-1
- ubuntu/cuda-driver-dev-11-4 11.4.148-1
- ubuntu/cuda-gdb-11-4 11.4.120-1
- ubuntu/cuda-libraries-11-4 11.4.2-1
- ubuntu/cuda-memcheck-11-4 11.4.120-1
- ubuntu/cuda-nvcc-11-4 11.4.152-1
- ubuntu/cuda-nvdisasm-11-4 11.4.152-1
- ubuntu/cuda-nvprof-11-4 11.4.120-1
- ubuntu/cuda-nvrtc-11-4 11.4.152-1
- ubuntu/cuda-nvtx-11-4 11.4.120-1
- ubuntu/cuda-sanitizer-11-4 11.4.120-1
- ubuntu/cuda-toolkit-11-4-config-common 11.4.148-1
- ubuntu/cuda-toolkit-11-config-common 11.6.55-1
- ubuntu/cuda-toolkit-config-common 11.6.55-1
- ubuntu/curl 7.58.0-2ubuntu3.21
- ubuntu/dash 0.5.8-2.10
- ubuntu/debconf 1.5.66ubuntu1
- ubuntu/debianutils 4.8.4
- ubuntu/diffutils 1:3.6-1
- ubuntu/dirmngr 2.2.4-1ubuntu1.4
- ubuntu/dpkg-dev 1.19.0.5ubuntu2.4
- ubuntu/dpkg 1.19.0.5ubuntu2.3
- ubuntu/e2fsprogs 1.44.1-1ubuntu1.3
- ubuntu/fakeroot 1.22-2ubuntu1
- ubuntu/fdisk 2.31.1-0.4ubuntu3.7
- ubuntu/findutils 4.6.0 git 20170828-2
- ubuntu/g -7 7.5.0-3ubuntu1~18.04
- ubuntu/g 4:7.4.0-1ubuntu2.3
- ubuntu/gcc-7-base 7.5.0-3ubuntu1~18.04
- ubuntu/gcc-7 7.5.0-3ubuntu1~18.04
- ubuntu/gcc-8-base 8.4.0-1ubuntu1~18.04
- ubuntu/gcc 4:7.4.0-1ubuntu2.3
- ubuntu/git-man 1:2.17.1-1ubuntu0.13
- ubuntu/git 1:2.17.1-1ubuntu0.13
- ubuntu/gnupg-l10n 2.2.4-1ubuntu1.4
- ubuntu/gnupg-utils 2.2.4-1ubuntu1.4
- ubuntu/gnupg2 2.2.4-1ubuntu1.4
- ubuntu/gnupg 2.2.4-1ubuntu1.4
- ubuntu/gpg-agent 2.2.4-1ubuntu1.4
- ubuntu/gpg-wks-client 2.2.4-1ubuntu1.4
- ubuntu/gpg-wks-server 2.2.4-1ubuntu1.4
- ubuntu/gpg 2.2.4-1ubuntu1.4
- ubuntu/gpgconf 2.2.4-1ubuntu1.4
- ubuntu/gpgsm 2.2.4-1ubuntu1.4
- ubuntu/gpgv 2.2.4-1ubuntu1.4
- ubuntu/grep 3.1-2build1
- ubuntu/gzip 1.6-5ubuntu1.1
- ubuntu/hmmer 3.1b2 dfsg-5ubuntu1
- ubuntu/hostname 3.20
- ubuntu/init-system-helpers 1.51
- ubuntu/kalign 1:2.03 20110620-4
- ubuntu/krb5-locales 1.16-2ubuntu0.2
- ubuntu/less 487-0.1
- ubuntu/libacl1 2.2.52-3build1
- ubuntu/libalgorithm-diff-perl 1.19.03-1
- ubuntu/libalgorithm-diff-xs-perl 0.04-5
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapt-pkg5.0 1.6.14
- ubuntu/libarchive13 3.2.2-3.1ubuntu0.7
- ubuntu/libasan4 7.5.0-3ubuntu1~18.04
- ubuntu/libasn1-8-heimdal 7.5.0 dfsg-1
- ubuntu/libassuan0 2.5.1-2
- ubuntu/libatomic1 8.4.0-1ubuntu1~18.04
- ubuntu/libattr1 1:2.4.47-2build1
- ubuntu/libaudit-common 1:2.8.2-1ubuntu1.1
- ubuntu/libaudit1 1:2.8.2-1ubuntu1.1
- ubuntu/libbinutils 2.30-21ubuntu1~18.04.8
- ubuntu/libblkid1 2.31.1-0.4ubuntu3.7
- ubuntu/libbsd0 0.8.7-1ubuntu0.1
- ubuntu/libbz2-1.0 1.0.6-8.1ubuntu0.2
- ubuntu/libc-bin 2.27-3ubuntu1.4
- ubuntu/libc-dev-bin 2.27-3ubuntu1.6
- ubuntu/libc6-dev 2.27-3ubuntu1.6
- ubuntu/libc6 2.27-3ubuntu1.6
- ubuntu/libcap-ng0 0.7.7-3.1
- ubuntu/libcc1-0 8.4.0-1ubuntu1~18.04
- ubuntu/libcilkrts5 7.5.0-3ubuntu1~18.04
- ubuntu/libcom-err2 1.44.1-1ubuntu1.3
- ubuntu/libcublas-11-4 11.6.1.51-1
- ubuntu/libcudnn8 8.2.4.15-1 cuda11.4
- ubuntu/libcufft-11-4 10.5.2.100-1
- ubuntu/libcufile-11-4 1.0.2.10-1
- ubuntu/libcurand-11-4 10.2.5.120-1
- ubuntu/libcurl3-gnutls 7.58.0-2ubuntu3.21
- ubuntu/libcurl4 7.58.0-2ubuntu3.21
- ubuntu/libcusolver-11-4 11.2.0.120-1
- ubuntu/libcusparse-11-4 11.6.0.120-1
- ubuntu/libdb5.3 5.3.28-13.1ubuntu1.1
- ubuntu/libdebconfclient0 0.213ubuntu1
- ubuntu/libdivsufsort3 2.0.1-3
- ubuntu/libdpkg-perl 1.19.0.5ubuntu2.4
- ubuntu/libedit2 3.1-20170329-1
- ubuntu/liberror-perl 0.17025-1
- ubuntu/libexpat1 2.2.5-3ubuntu0.9
- ubuntu/libext2fs2 1.44.1-1ubuntu1.3
- ubuntu/libfakeroot 1.22-2ubuntu1
- ubuntu/libfdisk1 2.31.1-0.4ubuntu3.7
- ubuntu/libffi6 3.2.1-8
- ubuntu/libfile-fcntllock-perl 0.22-3build2
- ubuntu/libgcc-7-dev 7.5.0-3ubuntu1~18.04
- ubuntu/libgcc1 1:8.4.0-1ubuntu1~18.04
- ubuntu/libgcrypt20 1.8.1-4ubuntu1.3
- ubuntu/libgdbm-compat4 1.14.1-6
- ubuntu/libgdbm5 1.14.1-6
- ubuntu/libgmp10 2:6.1.2 dfsg-2
- ubuntu/libgnutls30 3.5.18-1ubuntu1.5
- ubuntu/libgomp1 8.4.0-1ubuntu1~18.04
- ubuntu/libgpg-error0 1.27-6
- ubuntu/libgssapi-krb5-2 1.16-2ubuntu0.2
- ubuntu/libgssapi3-heimdal 7.5.0 dfsg-1
- ubuntu/libhcrypto4-heimdal 7.5.0 dfsg-1
- ubuntu/libheimbase1-heimdal 7.5.0 dfsg-1
- ubuntu/libheimntlm0-heimdal 7.5.0 dfsg-1
- ubuntu/libhogweed4 3.4.1-0ubuntu0.18.04.1
- ubuntu/libhx509-5-heimdal 7.5.0 dfsg-1
- ubuntu/libicu60 60.2-3ubuntu3.2
- ubuntu/libidn2-0 2.0.4-1.1ubuntu0.2
- ubuntu/libisl19 0.19-1
- ubuntu/libitm1 8.4.0-1ubuntu1~18.04
- ubuntu/libjsoncpp1 1.7.4-3
- ubuntu/libk5crypto3 1.16-2ubuntu0.2
- ubuntu/libkeyutils1 1.5.9-9.2ubuntu2.1
- ubuntu/libkrb5-26-heimdal 7.5.0 dfsg-1
- ubuntu/libkrb5-3 1.16-2ubuntu0.2
- ubuntu/libkrb5support0 1.16-2ubuntu0.2
- ubuntu/libksba8 1.3.5-2
- ubuntu/libldap-2.4-2 2.4.45 dfsg-1ubuntu1.10
- ubuntu/libldap-common 2.4.45 dfsg-1ubuntu1.10
- ubuntu/liblocale-gettext-perl 1.07-3build2
- ubuntu/liblsan0 8.4.0-1ubuntu1~18.04
- ubuntu/liblz4-1 0.0~r131-2ubuntu3.1
- ubuntu/liblzma5 5.2.2-1.3
- ubuntu/liblzo2-2 2.08-1.2
- ubuntu/libmount1 2.31.1-0.4ubuntu3.7
- ubuntu/libmpc3 1.1.0-1
- ubuntu/libmpfr6 4.0.1-1
- ubuntu/libmpx2 8.4.0-1ubuntu1~18.04
- ubuntu/libnccl2 2.11.4-1 cuda11.4
- ubuntu/libncurses5 6.1-1ubuntu1.18.04
- ubuntu/libncursesw5 6.1-1ubuntu1.18.04
- ubuntu/libnettle6 3.4.1-0ubuntu0.18.04.1
- ubuntu/libnghttp2-14 1.30.0-1ubuntu1
- ubuntu/libnpp-11-4 11.4.0.110-1
- ubuntu/libnpth0 1.5-3
- ubuntu/libnvjpeg-11-4 11.5.2.120-1
- ubuntu/libp11-kit0 0.23.9-2ubuntu0.1
- ubuntu/libpam-modules-bin 1.1.8-3.6ubuntu2.18.04.3
- ubuntu/libpam-modules 1.1.8-3.6ubuntu2.18.04.3
- ubuntu/libpam-runtime 1.1.8-3.6ubuntu2.18.04.3
- ubuntu/libpam0g 1.1.8-3.6ubuntu2.18.04.3
- ubuntu/libpcre3 2:8.39-9
- ubuntu/libperl5.26 5.26.1-6ubuntu0.6
- ubuntu/libprocps6 2:3.3.12-3ubuntu1.2
- ubuntu/libpsl5 0.19.1-5build1
- ubuntu/libquadmath0 8.4.0-1ubuntu1~18.04
- ubuntu/libreadline7 7.0-3
- ubuntu/librhash0 1.3.6-2
- ubuntu/libroken18-heimdal 7.5.0 dfsg-1
- ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-1
- ubuntu/libsasl2-2 2.1.27~101-g0780600 dfsg-3ubuntu2.3
- ubuntu/libsasl2-modules-db 2.1.27~101-g0780600 dfsg-3ubuntu2.3
- ubuntu/libseccomp2 2.5.1-1ubuntu1~18.04.2
- ubuntu/libselinux1 2.7-2build2
- ubuntu/libsemanage-common 2.7-2build2
- ubuntu/libsemanage1 2.7-2build2
- ubuntu/libsepol1 2.7-1
- ubuntu/libsmartcols1 2.31.1-0.4ubuntu3.7
- ubuntu/libsqlite3-0 3.22.0-1ubuntu0.4
- ubuntu/libss2 1.44.1-1ubuntu1.3
- ubuntu/libssl1.0.0 1.0.2n-1ubuntu5.10
- ubuntu/libssl1.1 1.1.1-1ubuntu2.1~18.04.14
- ubuntu/libstdc -7-dev 7.5.0-3ubuntu1~18.04
- ubuntu/libstdc 6 8.4.0-1ubuntu1~18.04
- ubuntu/libsystemd0 237-3ubuntu10.53
- ubuntu/libtasn1-6 4.13-2
- ubuntu/libtinfo5 6.1-1ubuntu1.18.04
- ubuntu/libtsan0 8.4.0-1ubuntu1~18.04
- ubuntu/libubsan0 7.5.0-3ubuntu1~18.04
- ubuntu/libudev1 237-3ubuntu10.53
- ubuntu/libunistring2 0.9.9-0ubuntu2
- ubuntu/liburcu6 0.10.1-1ubuntu1
- ubuntu/libuuid1 2.31.1-0.4ubuntu3.7
- ubuntu/libuv1 1.18.0-3
- ubuntu/libwind0-heimdal 7.5.0 dfsg-1
- ubuntu/libx11-6 2:1.6.4-3ubuntu0.4
- ubuntu/libx11-data 2:1.6.4-3ubuntu0.4
- ubuntu/libxau6 1:1.0.8-1ubuntu1
- ubuntu/libxcb1 1.13-2~ubuntu18.04
- ubuntu/libxdmcp6 1:1.1.2-3
- ubuntu/libxext6 2:1.3.3-1
- ubuntu/libxml2 2.9.4 dfsg1-6.1ubuntu1.8
- ubuntu/libxmuu1 2:1.1.2-2
- ubuntu/libzstd1 1.3.3 dfsg-2ubuntu1.2
- ubuntu/linux-libc-dev 4.15.0-200.211
- ubuntu/login 1:4.5-1ubuntu2
- ubuntu/lsb-base 9.20170808ubuntu1
- ubuntu/make 4.1-9.1ubuntu1
- ubuntu/manpages-dev 4.15-1
- ubuntu/manpages 4.15-1
- ubuntu/mawk 1.3.3-17ubuntu3
- ubuntu/mount 2.31.1-0.4ubuntu3.7
- ubuntu/multiarch-support 2.27-3ubuntu1.6
- ubuntu/ncurses-base 6.1-1ubuntu1.18.04
- ubuntu/ncurses-bin 6.1-1ubuntu1.18.04
- ubuntu/netbase 5.4
- ubuntu/openssh-client 1:7.6p1-4ubuntu0.7
- ubuntu/openssl 1.1.1-1ubuntu2.1~18.04.14
- ubuntu/passwd 1:4.5-1ubuntu2
- ubuntu/patch 2.7.6-2ubuntu1.1
- ubuntu/perl-base 5.26.1-6ubuntu0.6
- ubuntu/perl-modules-5.26 5.26.1-6ubuntu0.6
- ubuntu/perl 5.26.1-6ubuntu0.6
- ubuntu/pinentry-curses 1.1.0-1
- ubuntu/procps 2:3.3.12-3ubuntu1.2
- ubuntu/publicsuffix 20180223.1310-1
- ubuntu/readline-common 7.0-3
- ubuntu/sed 4.4-2
- ubuntu/sensible-utils 0.0.12
- ubuntu/sysvinit-utils 2.88dsf-59.10ubuntu1
- ubuntu/tar 1.29b-2ubuntu0.2
- ubuntu/tzdata 2022g-0ubuntu0.18.04
- ubuntu/ubuntu-keyring 2018.09.18.1~18.04.2
- ubuntu/util-linux 2.31.1-0.4ubuntu3.7
- ubuntu/wget 1.19.4-1ubuntu2.2
- ubuntu/xauth 1:1.0.10-1
- ubuntu/xz-utils 5.2.2-1.3ubuntu0.1
- ubuntu/zlib1g 1:1.2.11.dfsg-0ubuntu2
- portend 2.3
- protobuf 3.19.6
- py3Dmol 1.8.1
- py 1.5.4
- py 1.6.0
- pyOpenSSL 18.0.0
- pyOpenSSL 22.0.0
- Automat 0.7.0
- Babel 2.6.0
- CherryPy 17.1.0
- CherryPy 17.2.0
- Django 1.11.15
- Django 2.1
- Keras-Preprocessing 1.1.2
- Markdown 3.4.1
- MarkupSafe 2.1.1
- OpenMM 7.5.1
- PyDispatcher 2.0.5
- PyHamcrest 1.9.0
- PyJWT 1.6.4
- PySocks 1.6.8
- PySocks 1.7.1
- PyYAML 6.0
- Scrapy 1.5.1
- Twisted 18.7.0
- Werkzeug 2.2.2
- absl-py 0.13.0
- alphafold-colabfold 2.1.16
- appdirs 1.4.4
- asn1crypto 0.24.0
- astunparse 1.6.3
- attrs 18.1.0
- backports.functools-lru-cache 1.5
- backports.pdb 1.0.2
- backports.shutil-which 3.5.1
- backports.weakref 1.0.post1
- biopython 1.79
- brotlipy 0.7.0
- cachetools 5.2.0
- certifi 2018.08.24
- pyasn1-modules 0.2.2
- certifi 2021.10.8
- certifi 2022.12.7
- certifi 2022.9.24
- cffi 1.11.5
- cffi 1.15.0
- cffi 1.15.1
- chardet 3.0.4
- charset-normalizer 2.0.4
- charset-normalizer 2.1.1
- cheroot 6.4.0
- chex 0.1.5
- colabfold 1.3.0
- colorama 0.4.4
- conda-content-trust 0 unknown
- conda-package-handling 1.8.1
- conda-package-handling 1.9.0
- conda 22.11.1
- conda 4.12.0
- configparser 3.5.0
- constantly 15.1.0
- contextlib2 21.6.0
- cryptography 2.3.1
- cryptography 36.0.0
- cryptography 38.0.1
- cssselect 1.0.3
- cycler 0.11.0
- dask 0.18.2
- django-phonenumber-field 2.0.0
- django-phonenumber-field 2.0.1
- django-twilio 0.9.2
- dm-haiku 0.0.9
- dm-tree 0.1.7
- docker 6.0.1
- entrypoints 0.2.3
- enum34 1.1.6
- flask 0.10.1
- flatbuffers 2.0.7
- functools32 3.2.3.post2
- gast 0.4.0
- google-auth-oauthlib 0.4.6
- google-auth 2.15.0
- google-pasta 0.2.0
- grpcio 1.51.1
- h5py 2.8.0
- h5py 3.7.0
- hdf5storage 0.1.15
- hyperlink 18.0.0
- idna 2.7
- idna 3.3
- idna 3.4
- immutabledict 2.2.3
- importlib-metadata 4.13.0
- incremental 17.5.0
- ipaddress 1.0.22
- jaraco.functools 1.20
- jax 0.3.25
- jaxlib 0.3.25 cuda11.cudnn82
- jmp 0.0.2
- keras 2.7.0
- keyring 13.2.1
- kiwisolver 1.4.4
- libclang 14.0.6
- linecache2 1.0.0
- lxml 4.2.4
- matplotlib 3.1.3
- ml-collections 0.1.1
- more-itertools 4.3.0
- numpy 1.15.0
- numpy 1.15.1
- numpy 1.21.6
- oauthlib 3.2.2
- opt-einsum 3.3.0
- packaging 22.0
- pandas 1.3.5
- parsel 1.5.0
- pdbfixer 1.7
- phonenumbers 8.9.11
- phonenumbers 8.9.12
- phonenumberslite 8.9.10
- pip 18.0
- pip 21.2.4
- pip 22.3.1
- pip 8.1.2
- pluggy 0.7.1
- pluggy 1.0.0
- pyasn1-modules 0.2.8
- pyasn1 0.4.4
- pyasn1 0.4.8
- pycosat 0.6.3
- pycosat 0.6.4
- pycparser 2.18
- pycparser 2.21
- pyparsing 3.0.9
- python-dateutil 2.8.2
- pytz 2018.5
- pytz 2022.6
- pywin32-ctypes 0.1.2
- pywin32 223
- queuelib 1.5.0
- requests-oauthlib 1.3.1
- requests 2.19.1
- requests 2.27.1
- requests 2.28.1
- rsa 4.9
- ruamel-yaml-conda 0.15.100
- ruamel.yaml.clib 0.2.6
- ruamel.yaml 0.17.21
- scipy 1.7.3
- service-identity 17.0.0
- setuptools 40.2.0
- setuptools 61.2.0
- setuptools 65.5.0
- six 1.11.0
- six 1.16.0
- tabulate 0.9.0
- tempora 1.13
- tensorboard-data-server 0.6.1
- tensorboard-plugin-wit 1.8.1
- tensorboard 2.11.0
- tensorflow-cpu 2.7.4
- tensorflow-estimator 2.7.0
- tensorflow-io-gcs-filesystem 0.28.0
- termcolor 2.1.1
- toolz 0.12.0
- tox 3.2.1
- tqdm 4.63.0
- tqdm 4.64.1
- traceback2 1.4.0
- twilio 6.16.1
- typing_extensions 4.4.0
- unittest2 1.1.0
- urllib3 1.23
- urllib3 1.26.13
- urllib3 1.26.8
- virtualenv 16.0.0
- w3lib 1.19.0
- websocket-client 1.4.2
- wheel 0.31.1
- wheel 0.37.1
- wrapt 1.14.1
- zipp 3.11.0
- zope.interface 4.5.0
- jquery-ui 1.12.1