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broadinstitute/sam-tests : al-mct_resource_types

Sam integration tests

Debian GNU/Linux 11 (bullseye)

Latest release: over 1 year ago - 74,411 downloads - 308 dependencies

JSON

Dependencies

org.iq80.snappy:snappy 0.4
com.eed3si9n:gigahorse-apache-http_2.12 0.7.0
com.eed3si9n:gigahorse-core_2.12 0.7.0
com.eed3si9n:shaded-apache-httpasyncclient 0.7.0
com.eed3si9n:shaded-scalajson_2.12 1.0.0-M4
com.eed3si9n:sjson-new-core_2.12 0.9.1
com.eed3si9n:sjson-new-murmurhash_2.12 0.9.1
com.eed3si9n:sjson-new-scalajson_2.12 0.9.1
com.github.ben-manes.caffeine:caffeine 2.8.5
com.google.collections:google-collections 1.0
com.google.errorprone:error_prone_annotations 2.4.0
com.jcraft:jsch 0.1.54
com.lmax.disruptor:disruptor 3.4.2
com.sun.jna.platform:jna-platform 5.12.0
com.sun.jna:jna 5.12.0
com.sun.jna:jna 5.9.0
com.swoval:file-tree-views 2.1.9
com.typesafe.sslconfig:ssl-config-core_2.12 0.6.1
com.typesafe:config 1.4.2
commons-io:commons-io 2.6
io.get-coursier:lm-coursier-shaded_2.12 2.0.10
io.github.java-diff-utils:java-diff-utils 4.12
jline:jline 2.14.6
jrt-fs:jrt-fs 17.0.2
net.openhft:zero-allocation-hashing 0.10.1
org.apache.commons:commons-compress 1.21
org.apache.logging.log4j:log4j-api 2.17.1
org.apache.logging.log4j:log4j-core 2.17.1
org.apache.logging.log4j:log4j-slf4j-impl 2.17.1
org.apache.xbean:xbean-reflect 3.7
org.checkerframework.checker.qual:checker-qual 3.4.1
org.codehaus.plexus:plexus-archiver 4.2.6
org.codehaus.plexus:plexus-classworlds 2.6.0
org.codehaus.plexus:plexus-container-default 2.1.0
org.codehaus.plexus:plexus-io 3.2.0
org.codehaus.plexus:plexus-utils 3.4.1
org.fusesource.hawtjni:hawtjni-runtime 1.17
org.fusesource.jansi:jansi-freebsd32 1.8
org.fusesource.jansi:jansi-freebsd64 1.8
org.fusesource.jansi:jansi-linux32 1.8
org.fusesource.jansi:jansi-linux64 1.8
org.fusesource.jansi:jansi-native 1.8
org.fusesource.jansi:jansi-osx 1.8
org.fusesource.jansi:jansi-windows32 1.8
org.fusesource.jansi:jansi-windows64 1.8
org.fusesource.jansi:jansi 1.18
org.fusesource.jansi:jansi 2.1.0
org.jline:jline-builtins 3.19.0
org.jline:jline-builtins 3.21.0
org.jline:jline-reader 3.19.0
org.jline:jline-reader 3.21.0
org.jline:jline-remote-ssh 3.21.0
org.jline:jline-remote-telnet 3.21.0
org.jline:jline-style 3.19.0
org.jline:jline-style 3.21.0
org.jline:jline-terminal-jansi 3.19.0
org.jline:jline-terminal-jansi 3.21.0
org.jline:jline-terminal-jna 3.19.0
org.jline:jline-terminal-jna 3.21.0
org.jline:jline-terminal 3.19.0
org.jline:jline-terminal 3.21.0
org.jline:jline 3.21.0
org.jsoup:jsoup 1.14.3
org.reactivestreams.reactive-streams:reactive-streams 1.0.3
org.scala-lang.modules.scala-xml:scala-xml_2.12 1.0.6
org.scala-lang.modules:scala-collection-compat_2.12 2.6.0
org.scala-lang.modules:scala-parser-combinators_2.12 1.1.2
org.scala-lang.modules:scala-xml_2.12 1.3.0
org.scala-lang.scala-compiler:scala-compiler 2.12.16
org.scala-lang.scala-compiler:scala-compiler 2.12.16.v20220510-104727-VFINAL-c850a83
org.scala-lang.scala-compiler:scala-compiler 2.13.10
org.scala-lang.scala-compiler:scala-compiler 2.13.10.v20221008-124105-VFINAL-4905801
org.scala-lang.scala-library:scala-library 2.12.16
org.scala-lang.scala-library:scala-library 2.12.16.v20220510-104727-VFINAL-c850a83
org.scala-lang.scala-library:scala-library 2.13.10
org.scala-lang.scala-library:scala-library 2.13.10.v20221008-124105-VFINAL-4905801
org.scala-lang.scala-reflect:scala-reflect 2.12.16
org.scala-lang.scala-reflect:scala-reflect 2.12.16.v20220510-104727-VFINAL-c850a83
org.scala-lang.scala-reflect:scala-reflect 2.13.10
org.scala-lang.scala-reflect:scala-reflect 2.13.10.v20221008-124105-VFINAL-4905801
org.scala-sbt.ipcsocket:ipcsocket 1.5.0
org.scala-sbt.ivy:ivy 2.3.0-sbt-fbc4f586aeeb1591710b14eb4f41b94880dcd745
org.scala-sbt.jline:jline 2.14.7-sbt-a1b0ffbb8f64bb820f4f84a0c07a0c0964507493
org.scala-sbt:actions_2.12 1.7.2
org.scala-sbt:collections_2.12 1.7.2
org.scala-sbt:command_2.12 1.7.2
org.scala-sbt:compiler-bridge_2.12 1.7.2
org.scala-sbt:compiler-bridge_2.12 1.7.2-sources
org.scala-sbt:compiler-bridge_2.13 1.7.2-sources
org.scala-sbt:compiler-interface 1.7.2
org.scala-sbt:completion_2.12 1.7.2
org.scala-sbt:core-macros_2.12 1.7.2
org.scala-sbt:io_2.12 1.7.0
org.scala-sbt:launcher-interface 1.4.1
org.scala-sbt:librarymanagement-core_2.12 1.7.1
org.scala-sbt:librarymanagement-ivy_2.12 1.7.1
org.scala-sbt:logic_2.12 1.7.2
org.scala-sbt:main-settings_2.12 1.7.2
org.scala-sbt:main_2.12 1.7.2
org.scala-sbt:org.scala-sbt-compiler-bridge_2.12 1.7.2-bin_2.12.16__61.0
org.scala-sbt:org.scala-sbt-compiler-bridge_2.12 1.7.2-bin_2.12.16__61.0-1.7.2_20221003T022732
org.scala-sbt:org.scala-sbt-compiler-bridge_2.13 1.7.2-bin_2.13.10__61.0
org.scala-sbt:org.scala-sbt-compiler-bridge_2.13 1.7.2-bin_2.13.10__61.0-1.7.2_20221003T022732
org.scala-sbt:protocol_2.12 1.7.2
org.scala-sbt:run_2.12 1.7.2
org.scala-sbt:sbinary_2.12 0.5.1
org.scala-sbt:sbt-launch 1.4.1
org.scala-sbt:sbt 1.7.2
org.scala-sbt:scripted-plugin_2.12 1.7.2
org.scala-sbt:task-system_2.12 1.7.2
org.scala-sbt:tasks_2.12 1.7.2
org.scala-sbt:template-resolver 0.1
org.scala-sbt:test-agent 1.7.2
org.scala-sbt:test-interface 1.0
org.scala-sbt:testing_2.12 1.7.2
org.scala-sbt:util-cache_2.12 1.7.2
org.scala-sbt:util-control_2.12 1.7.2
org.scala-sbt:util-interface 1.7.2
org.scala-sbt:util-logging_2.12 1.7.2
org.scala-sbt:util-position_2.12 1.7.2
org.scala-sbt:util-relation_2.12 1.7.2
org.scala-sbt:util-tracking_2.12 1.7.2
org.scala-sbt:zinc-apiinfo_2.12 1.7.2
org.scala-sbt:zinc-classfile_2.12 1.7.2
org.scala-sbt:zinc-classpath_2.12 1.7.2
org.scala-sbt:zinc-compile-core_2.12 1.7.2
org.scala-sbt:zinc-compile_2.12 1.7.2
org.scala-sbt:zinc-core_2.12 1.7.2
org.scala-sbt:zinc-lm-integration_2.12 1.7.2
org.scala-sbt:zinc-persist-core-assembly 1.7.2
org.scala-sbt:zinc-persist_2.12 1.7.2
org.scala-sbt:zinc_2.12 1.7.2
org.slf4j:slf4j-api 1.7.28
org.sonatype.oss:jline 2.14.6
scalap:scalap 2.13.10
shaded-jawn-parser_2.12:shaded-jawn-parser_2.12 0.9.1

debian/adduser 3.118
debian/apt 2.2.4
debian/base-files 11.1 deb11u3
debian/base-passwd 3.5.51
debian/bash 5.1-2 b3
debian/binutils-common 2.35.2-2
debian/binutils-x86-64-linux-gnu 2.35.2-2
debian/binutils 2.35.2-2
debian/bsdutils 1:2.36.1-8 deb11u1
debian/bzip2 1.0.8-4
debian/ca-certificates 20210119
debian/coreutils 8.32-4 b1
debian/curl 7.74.0-1.3 deb11u1
debian/dash 0.5.11 git20200708 dd9ef66-5
debian/dbus 1.12.24-0 deb11u1
debian/debconf 1.5.77
debian/debian-archive-keyring 2021.1.1
debian/debianutils 4.11.2
debian/debugedit 4.16.1.2 dfsg1-3
debian/diffutils 1:3.7-5
debian/dirmngr 2.2.27-2 deb11u1
debian/dpkg 1.20.9
debian/e2fsprogs 1.46.2-2
debian/findutils 4.8.0-1
debian/fontconfig-config 2.13.1-4.2
debian/fontconfig 2.13.1-4.2
debian/fonts-dejavu-core 2.37-2
debian/gcc-10-base 10.2.1-6
debian/gcc-9-base 9.3.0-22
debian/git-man 1:2.30.2-1
debian/git 1:2.30.2-1
debian/gnupg-l10n 2.2.27-2 deb11u1
debian/gnupg-utils 2.2.27-2 deb11u1
debian/gnupg 2.2.27-2 deb11u1
debian/gpg-agent 2.2.27-2 deb11u1
debian/gpg-wks-client 2.2.27-2 deb11u1
debian/gpg-wks-server 2.2.27-2 deb11u1
debian/gpg 2.2.27-2 deb11u1
debian/gpgconf 2.2.27-2 deb11u1
debian/gpgsm 2.2.27-2 deb11u1
debian/gpgv 2.2.27-2 deb11u1
debian/grep 3.6-1
debian/gzip 1.10-4
debian/hostname 3.23
debian/init-system-helpers 1.60
debian/libacl1 2.2.53-10
debian/libapparmor1 2.13.6-10
debian/libapr1 1.7.0-6 deb11u1
debian/libaprutil1 1.6.1-5
debian/libapt-pkg6.0 2.2.4
debian/libarchive13 3.4.3-2 deb11u1
debian/libassuan0 2.5.3-7.1
debian/libattr1 1:2.4.48-6
debian/libaudit-common 1:3.0-2
debian/libaudit1 1:3.0-2
debian/libbinutils 2.35.2-2
debian/libblkid1 2.36.1-8 deb11u1
debian/libbrotli1 1.0.9-2 b2
debian/libbsd0 0.11.3-1
debian/libbz2-1.0 1.0.8-4
debian/libc-bin 2.31-13 deb11u3
debian/libc6 2.31-13 deb11u3
debian/libcap-ng0 0.7.9-2.2 b1
debian/libcap2 1:2.44-1
debian/libcbor0 0.5.0 dfsg-2
debian/libcom-err2 1.46.2-2
debian/libcrypt1 1:4.4.18-4
debian/libctf-nobfd0 2.35.2-2
debian/libctf0 2.35.2-2
debian/libcurl3-gnutls 7.74.0-1.3 deb11u1
debian/libcurl4 7.74.0-1.3 deb11u1
debian/libdb5.3 5.3.28 dfsg1-0.8
debian/libdbus-1-3 1.12.24-0 deb11u1
debian/libdebconfclient0 0.260
debian/libdw1 0.183-1
debian/libedit2 3.1-20191231-2 b1
debian/libelf1 0.183-1
debian/liberror-perl 0.17029-1
debian/libexpat1 2.2.10-2 deb11u3
debian/libext2fs2 1.46.2-2
debian/libffi7 3.3-6
debian/libfido2-1 1.6.0-2
debian/libfontconfig1 2.13.1-4.2
debian/libfreetype6 2.10.4 dfsg-1
debian/libgcc-s1 10.2.1-6
debian/libgcrypt20 1.8.7-6
debian/libgdbm-compat4 1.19-2
debian/libgdbm6 1.19-2
debian/libgmp10 2:6.2.1 dfsg-1 deb11u1
debian/libgnutls30 3.7.1-5
debian/libgomp1 10.2.1-6
debian/libgpg-error0 1.38-2
debian/libgssapi-krb5-2 1.18.3-6 deb11u1
debian/libhogweed6 3.7.3-1
debian/libicu67 67.1-7
debian/libidn2-0 2.3.0-5
debian/libk5crypto3 1.18.3-6 deb11u1
debian/libkeyutils1 1.6.1-2
debian/libkrb5-3 1.18.3-6 deb11u1
debian/libkrb5support0 1.18.3-6 deb11u1
debian/libksba8 1.5.0-3
debian/libldap-2.4-2 2.4.57 dfsg-3
debian/liblua5.2-0 5.2.4-1.1 b3
debian/liblz4-1 1.9.3-2
debian/liblzma5 5.2.5-2
debian/libmagic-mgc 1:5.39-3
debian/libmagic1 1:5.39-3
debian/libmd0 1.0.3-3
debian/libmount1 2.36.1-8 deb11u1
debian/libmpdec3 2.5.1-1
debian/libncurses6 6.2 20201114-2
debian/libncursesw6 6.2 20201114-2
debian/libnettle8 3.7.3-1
debian/libnghttp2-14 1.43.0-1
debian/libnpth0 1.6-3
debian/libnsl2 1.3.0-2
debian/libp11-kit0 0.23.22-1
debian/libpam-modules-bin 1.4.0-9 deb11u1
debian/libpam-modules 1.4.0-9 deb11u1
debian/libpam-runtime 1.4.0-9 deb11u1
debian/libpam0g 1.4.0-9 deb11u1
debian/libpcre2-8-0 10.36-2
debian/libpcre3 2:8.39-13
debian/libperl5.32 5.32.1-4 deb11u2
debian/libpng16-16 1.6.37-3
debian/libpopt0 1.18-2
debian/libprocps8 2:3.3.17-5
debian/libpsl5 0.21.0-1.2
debian/libpython3-stdlib 3.9.2-3
debian/libpython3.9-minimal 3.9.2-1
debian/libpython3.9-stdlib 3.9.2-1
debian/libreadline8 8.1-1
debian/librpm9 4.16.1.2 dfsg1-3
debian/librpmbuild9 4.16.1.2 dfsg1-3
debian/librpmio9 4.16.1.2 dfsg1-3
debian/librpmsign9 4.16.1.2 dfsg1-3
debian/librtmp1 2.4 20151223.gitfa8646d.1-2 b2
debian/libsasl2-2 2.1.27 dfsg-2.1 deb11u1
debian/libsasl2-modules-db 2.1.27 dfsg-2.1 deb11u1
debian/libseccomp2 2.5.1-1 deb11u1
debian/libselinux1 3.1-3
debian/libsemanage-common 3.1-1
debian/libsemanage1 3.1-1 b2
debian/libsepol1 3.1-1
debian/libserf-1-1 1.3.9-10
debian/libsmartcols1 2.36.1-8 deb11u1
debian/libsqlite3-0 3.34.1-3
debian/libss2 1.46.2-2
debian/libssh2-1 1.9.0-2
debian/libssl1.1 1.1.1n-0 deb11u1
debian/libstdc 6 10.2.1-6
debian/libsvn1 1.14.1-3 deb11u1
debian/libsystemd0 247.3-7
debian/libtasn1-6 4.16.0-2
debian/libtinfo6 6.2 20201114-2
debian/libtirpc-common 1.3.1-1
debian/libtirpc3 1.3.1-1
debian/libudev1 247.3-7
debian/libunistring2 0.9.10-4
debian/libutf8proc2 2.5.0-1
debian/libuuid1 2.36.1-8 deb11u1
debian/libxml2 2.9.10 dfsg-6.7 deb11u2
debian/libxxhash0 0.8.0-2
debian/libzstd1 1.4.8 dfsg-2.1
debian/login 1:4.8.1-1
debian/logsave 1.46.2-2
debian/lsb-base 11.1.0
debian/mawk 1.3.4.20200120-2
debian/media-types 4.0.0
debian/mercurial-common 5.6.1-4
debian/mercurial 5.6.1-4
debian/mount 2.36.1-8 deb11u1
debian/ncurses-base 6.2 20201114-2
debian/ncurses-bin 6.2 20201114-2
debian/netbase 6.3
debian/openssh-client 1:8.4p1-5
debian/openssl 1.1.1n-0 deb11u1
debian/p11-kit-modules 0.23.22-1
debian/p11-kit 0.23.22-1
debian/passwd 1:4.8.1-1
debian/perl-base 5.32.1-4 deb11u2
debian/perl-modules-5.32 5.32.1-4 deb11u2
debian/perl 5.32.1-4 deb11u2
debian/pinentry-curses 1.1.0-4
debian/procps 2:3.3.17-5
debian/python3-minimal 3.9.2-3
debian/python3.9-minimal 3.9.2-1
debian/python3.9 3.9.2-1
debian/python3 3.9.2-3
debian/readline-common 8.1-1
debian/rpm-common 4.16.1.2 dfsg1-3
debian/rpm2cpio 4.16.1.2 dfsg1-3
debian/rpm 4.16.1.2 dfsg1-3
debian/sed 4.7-1
debian/sensible-utils 0.0.14
debian/subversion 1.14.1-3 deb11u1
debian/sysvinit-utils 2.96-7 deb11u1
debian/tar 1.34 dfsg-1
debian/tzdata 2021a-1 deb11u3
debian/ucf 3.0043
debian/unzip 6.0-26
debian/util-linux 2.36.1-8 deb11u1
debian/wget 1.21-1 deb11u1
debian/xz-utils 5.2.5-2.1~deb11u1
debian/zlib1g 1:1.2.11.dfsg-2 deb11u1

java 17.0.2 8-86
python 3.9.2

mercurial 5.6.1