Ecosyste.ms: Docker

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Package Usage : maven : org.broadinstitute.hellbender.Main:gatk-package

Explore the latest package usage data for org.broadinstitute.hellbender.Main:gatk-package in the maven ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 163
Total downloads: 74,424,344

More details on packages.ecosyste.ms - JSON

intelliseqngs/astrolabe 1.0.0

  • version: 4.1.7.0-local
Latest release: about 4 years ago - 188 downloads - 1,097 dependencies
intelliseqngs/bcl-to-fq 1.0.2

  • version: 4.3.0.0-local, 4.3.0.0-spark
Latest release: almost 2 years ago - 184 downloads - 1,047 dependencies
intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

  • version: 4.2.0.0-local, 4.2.0.0-spark
Latest release: about 3 years ago - 165 downloads - 1,057 dependencies
ctomlins/testuniv_update latest

  • version: 4.1.4.0-local
Latest release: almost 4 years ago - 153 downloads - 758 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

  • version: 4.2.6.1-local, 4.2.6.1-spark
Latest release: almost 2 years ago - 131 downloads - 1,081 dependencies
hoonbiolab/hl_base v1.2

  • version: 4.1.8.1-local
Latest release: about 2 years ago - 136 downloads - 873 dependencies
intelliseqngs/collect-hs-metrics 1.0.0

  • version: 4.1.6.0-spark, 4.1.6.0-local
Latest release: over 4 years ago - 131 downloads - 928 dependencies
intelliseqngs/gatk-4.2.4.1 1.0.1

  • version: 4.2.4.1-local, 4.2.4.1-spark
Latest release: almost 2 years ago - 161 downloads - 1,118 dependencies
intelliseqngs/resources-pgx-polygenic 1.2.4

  • version: 4.2.4.1-spark, 4.2.4.1-local
Latest release: about 1 year ago - 300 downloads - 1,059 dependencies
hoonbiolab/cnvkit v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 83 downloads - 817 dependencies
intelliseqngs/task_bam-metrics-hg38 1.0.2

  • version: 4.3.0.0-spark, 4.3.0.0-local
Latest release: almost 2 years ago - 79 downloads - 1,144 dependencies
luisas/gatk latest

  • version: 4.0.4.0-local, 4.0.4.0-spark
Latest release: over 6 years ago - 75 downloads - 374 dependencies
ctomlins/testuniv latest

  • version: 4.1.4.0-local
Latest release: about 3 years ago - 69 downloads - 536 dependencies
intelliseqngs/task_vcf-anno-custom 1.0.1

  • version: 4.1.7.0-local, 4.1.7.0-spark
Latest release: about 4 years ago - 58 downloads - 1,025 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 4.1.4.0-local, 4.2.1.0-local, 4.2.1.0-spark, 4.1.4.0-spark
Latest release: over 1 year ago - 331 downloads - 980 dependencies
hoonbiolab/cnvpytor v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 52 downloads - 807 dependencies
intelliseqngs/task_calibrate-dragstr-model-grch38-no-alt 1.0.1

  • version: 4.3.0.0-spark, 4.3.0.0-local
Latest release: almost 2 years ago - 58 downloads - 1,049 dependencies
luisas/gatk-haplotypecaller latest

  • version: 4.0.4.0-spark, 4.0.4.0-local
Latest release: over 6 years ago - 48 downloads - 734 dependencies
nbutter/gatk_tools latest

GATK and other bioinformatics tools packaged together.

  • version: 4.1.2.0-spark, 4.1.2.0-local
Latest release: over 5 years ago - 44 downloads - 869 dependencies
hoonbiolab/kallisto v1.2

  • version: 4.1.8.1-local
Latest release: over 2 years ago - 43 downloads - 817 dependencies
hoonbiolab/mutect2 v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 42 downloads - 811 dependencies
hoonbiolab/gatk4 v1.1

  • version: 4.1.0.0-spark, 4.1.0.0-local, 4.1.8.1-local
Latest release: about 3 years ago - 44 downloads - 907 dependencies
hoonbiolab/amplicon_architect v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 39 downloads - 804 dependencies
dmiller15/gatk 4.1.7.0R0.1

  • version: 4.1.7.0-local, 4.1.7.0-spark
Latest release: over 4 years ago - 41 downloads - 866 dependencies
hoonbiolab/glass v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 37 downloads - 811 dependencies
hoonbiolab/fastqc v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 39 downloads - 799 dependencies
skoyamamd/analysis_base latest

neoterm/youcompleteme enabled ubuntu20.04

  • version: 4.2.3.0-local, 4.2.3.0-spark
Latest release: about 3 years ago - 34 downloads - 701 dependencies
hoonbiolab/multiqc v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 33 downloads - 819 dependencies
ctomlins/tellread_2022 latest

  • version: 4.1.4.0-local
Latest release: almost 2 years ago - 34 downloads - 711 dependencies
hoonbiolab/variantannotation_r v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 36 downloads - 828 dependencies
hoonbiolab/delly v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 31 downloads - 800 dependencies
hoonbiolab/vcf-kit v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 29 downloads - 840 dependencies
hoonbiolab/gatk4_scnv v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 29 downloads - 811 dependencies
hoonbiolab/ascat v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 32 downloads - 792 dependencies
intelliseqngs/pharmcat-resources 1.1.0

  • version: 4.2.4.1-spark, 4.2.4.1-local
Latest release: over 2 years ago - 31 downloads - 964 dependencies
hoonbiolab/mixcr v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 30 downloads - 710 dependencies
hoonbiolab/lohhla v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 30 downloads - 708 dependencies
hoonbiolab/imagemagick v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 29 downloads - 681 dependencies
hoonbiolab/pvacseq v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 29 downloads - 682 dependencies
hoonbiolab/ensembl_vep v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 28 downloads - 682 dependencies
hoonbiolab/optitype v1.1

  • version: 4.1.8.1-local, 4.1.0.0-local
Latest release: about 3 years ago - 28 downloads - 776 dependencies
hoonbiolab/titan v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 29 downloads - 754 dependencies
hoonbiolab/funcotate v1.1

  • version: 4.1.0.0-local, 4.1.8.1-local
Latest release: about 3 years ago - 28 downloads - 777 dependencies
hoonbiolab/test2 v1.0

  • version: 4.1.0.0-spark, 4.1.8.0-local, 4.1.0.0-local
Latest release: over 3 years ago - 24 downloads - 759 dependencies
hoonbiolab/ngscheckmate v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 32 downloads - 653 dependencies
hoonbiolab/star v1.1

  • version: 4.0.9.0-local, 4.1.8.1-local
Latest release: about 3 years ago - 28 downloads - 782 dependencies
hoonbiolab/prada v1.2

  • version: 4.1.8.1-local
Latest release: almost 3 years ago - 28 downloads - 699 dependencies
broadinstitute/gatk-test 4.0-prerelease-1efafd2b5

  • version: 4.beta.6-169-g1efafd2-SNAPSHOT-spark, 4.beta.6-169-g1efafd2-SNAPSHOT-local
Latest release: almost 7 years ago - 23 downloads - 1,213 dependencies
hoonbiolab/revertsam v1.1

  • version: 4.1.8.1-local, 4.2.0.0-local
Latest release: about 3 years ago - 26 downloads - 884 dependencies
hoonbiolab/vep v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 26 downloads - 682 dependencies
intelliseqngs/task_gvcf-genotype-by-vcf 0.0.3

  • version: 4.1.6.0-spark, 4.1.6.0-local
Latest release: over 4 years ago - 23 downloads - 844 dependencies
chgyi/gatk 4

  • version: 4.1.4.0-local
Latest release: almost 5 years ago - 23 downloads - 400 dependencies
intelliseqngs/task_vcf-varcall-metrics-grch38-no-alt 1.1.2

  • version: 4.3.0.0-local, 4.3.0.0-spark
Latest release: almost 2 years ago - 26 downloads - 1,038 dependencies
hoonbiolab/test v1.0

  • version: 4.1.0.0-local, 4.1.8.0-local, 4.1.0.0-spark
Latest release: over 3 years ago - 23 downloads - 779 dependencies
hoonbiolab/sequenza v1.1

  • version: 4.1.8.1-local
Latest release: about 3 years ago - 25 downloads - 801 dependencies
crukmi/target-snakemake-docker latest

  • version: 4.2.5.0-local, 4.2.5.0-spark
Latest release: over 2 years ago - 21 downloads - 1,148 dependencies
bokebiotech/qcpipe v6

  • version: 4.3.0.0-spark, 4.1.4.1-local, 4.1.4.1-spark, 4.3.0.0-local
Latest release: over 1 year ago - 115 downloads - 1,186 dependencies