broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

broadinstitute/terra-jupyter-aou 8bf6b13

broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

vanallenlab/sv-pipeline filter_gt_029fa3b

broadinstitute/gatk-dev NVSCOREVARIANTS-PREVIEW-SNAPSHOT

GATK Development

ocdr/pytorchserver 1.10.2

broadinstitute/terra-jupyter-gatk 8444561

huggingface/doc-builder-transformers latest

deeployml/alibi-explainer v0.11.0-deeploy-3.0.0

broadinstitute/fungal_gatk4 latest

nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

intelliseqngs/gatk-4.1.7.0-hg38 1.0.1

intelliseqngs/task_bam-bsqr 1.2.2

intelliseqngs/task_bam-filter-mismatch 1.4.1

intelliseqngs/gatk dbsnp-genotyping_grch38-no-alt-analysis-set_1.0.4-chrY-and-the-rest

intelliseqngs/gatk-4.1.7.0 1.0.4

intelliseqngs/task_bam-metrics 1.2.8

intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

intelliseqngs/gatk-4.1.6.0 2.0.2

intelliseqngs/task_mt-varcall-mutect2 1.1.2

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

intelliseqngs/gatk-4.2.0.0 1.0.0

intelliseqngs/task_vcf-concat 1.0.4

intelliseqngs/gatk-4.1.9.0 1.0.0

intelliseqngs/task_vcf-anno-cosmic 2.0.0

intelliseqngs/task_mt-realign 1.1.2

intelliseqngs/task_bam-gatk-m2 1.1.2

intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

intelanalytics/hyper-zoo latest

Analytics Zoo hyperzoo image has been built to easily run applications on Kubernetes cluster.

intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

thavlik/machine-learning-portfolio latest

hoonbiolab/cellranger v1.0

tiberiuichim/nlp-server latest

intelliseqngs/task_vcf-prepare 1.0.3

deeployml/example-custom-image 0.2.0

nfcore/exoseq dev

A docker container for the ExoSeq pipeline

nfvri/rllib-base 2.3.1-2.10

rllib base repo

intelliseqngs/gatk-4.1.7.0-grch38-no-alt 1.0.1

intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

kenwood/sklearnserver v0.8.0

intelanalytics/bigdl 2.4.0

BigDL local test Docker image

wiebekenza/pac latest

intelliseqngs/task_bed-to-interval-list 1.1.5

huggingface/pt-tf-gpu latest

qdidiscoveryservices/gatk-v2461_bwa_aws latest

intelliseqngs/gatk-4.2.4.1-hg38 1.0.0

vanallenlab/sv-pipeline-qc gnomad_v3_qc

intelliseqngs/task_vcf-concat-beagle 1.1.3

intelliseqngs/task_vcf-vqsr-snp-recalib-hg38 1.1.2

intelliseqngs/resources longranger_v0.1

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-hg38 1.0.2-chrY-and-the-rest

intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

intelanalytics/hyper-zoo-spark-2.4.6 latest

hoonbiolab/align_dna v1.3

intelliseqngs/task_pileup-merge 1.0.2

intelliseqngs/task_vcf-filter-align-errors 1.1.0

trust1/gatk version0.4.1

Variant Calling Pipeline based on GATK image

intelanalytics/hyper-zoo-spark-3.1.2 latest

huggingface/pytorch-latest-release-gpu latest

intelliseqngs/astrolabe 1.0.0

intelliseqngs/bcl-to-fq 1.0.2

intelanalytics/bigdl-spark-3.1.2 ctc-orca-client

huggingface/transformers-tensorflow-latest-gpu latest

intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

trantion/ray 1.11.0-openjdk11-artifacts

unitedmanufacturinghub/hivemq-init 0.9.15

ctomlins/testuniv_update latest

huggingface/transformers-pytorch-latest-gpu latest

qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

hoonbiolab/hl_base v1.2

footprintai/iccc-sp8 v0.3.9

intelliseqngs/collect-hs-metrics 1.0.0

intelliseqngs/gatk-4.2.4.1 1.0.1

trust1/ubuntu OMGv001

Target Capture Cloud Platform (TCCP) Oz Mammals Genomics Phylogenomics aka OMG pipeline

sharafsatish/huggingface-sentiment-custom-model v5

intelliseqngs/resources-pgx-polygenic 1.2.4

hoonbiolab/cnvkit v1.1

intelliseqngs/task_bam-metrics-hg38 1.0.2

luisas/gatk latest

ctomlins/testuniv latest

intelanalytics/bigdl-spark-2.4.6 2.1.0

deeployml/omni-explainer v0.5.1-deeploy-0.3.8-indi-pdp

intelanalytics/hyper-zoo-spark-3.0.0 0.11.2