dnxbrasil/automation 0.12.6

robertplayer/scidap-qiime2 stable

cgrlab/kraken v2.1.3

cube2222/pulumi-spacelift-nodejs-test latest

nfcore/eager 2.5.3

A Docker image for the nf-core/eager pipeline.

chasemc2/sgnf-sgpy 1.2.2

ldaveyl/bioinformatics-install-dev 0.1

gmtscience/kraken2bracken 2.1.2

bactopia/bactopia 2.2.0

settlemint/deployer 7.0.0

globusgenomics/picrust 1.0

pvstodghill/pipeline-pirate 2023-11-20

emvcaest/markerscan latest

sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

johncclayton/rider-dev latest

A Linux host, based off Google Workspace images for use with JetBrains Gateway / Rider

gregorysprenger/prefect-and-edirect v1.0.0

Image with Prefect and NCBI's edirect.

nextgenusfs/funannotate-slim v1.8.17

Base funannotate image (no databases)

supark87/ngs-pipeline-process-amrfinder ver1.6

harshjain12/imagelatest17 1.0

hoonbiolab/vcf-kit v1.1

cube2222/pulumi-spacelift-dotnet-test latest

ddiazescandon/funannotate 1.8.15

nextgenusfs/funannotate:1.8.15 with a working chlorophyte_odb10 set, phyml for dn/ds and micromamba

mheers/cloud-native-tools 3.21.1

qxes4210/mimseq double_result_page

This repo is for the mimseq web tool (tRNA analysis)

yingxiaomai/genomeassess v0

gmtscience/metaphlan4 4.0.6

a metaphlan4 docker with humann 3.5 suited for use in scitq or other systems (like nextflow)

theoaphidian/kraken-bracken latest

A container with all the tools to preprocess metagenome samples with kraken and bracken.

pvstodghill/pipeline-genomes 2023-11-21

bsceapm/ahatool 2.2

bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

jimmyliu1326/panx 1.6.0

skyhype/print cypress

staphb/emmtyper 0.2.0

harshjain12/imagelatest21 1.0

andrewatmp/qiime_unzip latest

chriswyatt/bioseqio_gffread latest

ejfresch/kleborate 3.1.0

ejfresch/resfinder 1.0

worldofgeese/lbob-devcontainer 0.1.5

gesiscss/binder-r2d-g5b5b759-melbournebioinformatics-2dcomp90014-32126b 503568ba294fdc8c8f0765271673385bdef0eece

emersonchao/dsc180b latest

harshjain12/latest10 1.0

mrisco/pulumi-alpine latest

shiramaty/qiime2-sratools latest

jinlongru/protclust v0.1.4

chriswyatt/genespaces latest

gmtscience/metaphlan3 3.1.0

dwils152/yeast-orthology v1.3

katharinahoff/response-notebook devel

harshjain12/latest3 1.0

dnxbrasil/pulumi 3.40.0

denglab/viroprofiler-bracken v0.2

jlphillips/csci 2025-08-08-p2

MTSU Department of Computer Science Stack

harshjain12/abc 1.0

jysgro/entrez-direct 2204

entrez-direct tools under Ubuntu 22.04 or 20.04 (AMD64 only)

ryshoooo/pulumi-aws 3.48.0

Useful image for CICD pipelines using Pulumi with python for AWS deployments

oxfordmmm/bugflow_amr_finder v0.1.1

worldofgeese/buddhabot-devcontainer latest

sebimer/samba-v4-qiime2 2024.2

abinaya251/navigator_base 1

bioedge/edge_24_1_ubuntu18 20231115

prokan/assemble 0.2.0

kumalpha/qiime2-core latest

iconnor/act-ubuntu full-latest

catthehacker/ubuntu:full-latest with updated docker and compose for local github actions

cube2222/pulumi-spacelift-test latest

liutiantian/lrgasp_event2_metrics 0.9.1

nanozoo/abritamr 1.0.13--e4b83d1

jodyphelan/dengue-ngs latest

plaquette/r_helper rbase

helper repo to use certain r packages on a computing node

hoonbiolab/hmftools_sv v.2.13.2

cgrlab/qiime2 2023.5

frontgoo/soar-docker 0.1.0

soar docker env

zjnolen/angsd-snakemake-pipeline 0.1

nanozoo/plannotate 1.2.0--5b46a44

vmikk/nextits 1.1.0

supark87/amrfinder ver1.2

gesiscss/binder-r2d-g5b5b759-esallychang-2dcommandline-5fedirect-5fasbcb-5fapril2023-fd9990 e5e0ef740d48ad22e4694e2133a990d17f6ed13b

kumalpha/mob-suite latest

spvensko/haplotypetools 1.0

harshjain12/imagelatest18 1.0

pvstodghill/blast 2.15.0__2024-04-17

mfhqlkadmins/k6-amqp 0.32.0

k6 with amqp extension

vito/bass-loop 9141da72318c09fe61e12c8c2166ffad6e8c6413

technicitytools/dev-python v0.1.0

ferranhalborn/ctf_eth_challenge_dos_one latest

sravanmeduri97/majordomo_manager 4.0.1-snapshot.11

plaquette/prokka_helper centos

https://github.com/plaquette/prokka_container

hydragenetics/straglr 1.4.1

alekosbiofilos/vep lb