ebsproject/ba-worker 23.06.30.184-DEV

nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

hpccbuilds/smoketest-platform-build-base 8.6

lzydock/lzy-server optimize-tests-time-1.0

biocontainers/oncocnv v7.0_cv2

hpccbuilds/smoketest-platform-build-vcpkg candidate-8.12.x-164df4f5d1cd71ca32be2fb79a2c36cde9fa9308

intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

nfcore/proteomicslfq dev

A Docker Container for label free quantification for proteomics data.

nfcore/clipseq dev

nfcore/diaproteomics dev

A Docker container for nf-core/diaproteomics

intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

lzydock/lzy-whiteboard optimize-tests-time-1.0

intelliseqngs/gatk-4.1.6.0 2.0.2

qcdis/n-a-a-vre v2.2.7-beta

intelliseqngs/task_mt-varcall-mutect2 1.1.2

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

intelliseqngs/gatk-4.2.0.0 1.0.0

intelliseqngs/task_vcf-concat 1.0.4

intelliseqngs/task_vcf-anno-cosmic 2.0.0

qcdis/n-a-a-vre-multiply v2.0-beta

intelliseqngs/task_vcf-uniq 1.0.0

qcdis/n-a-a-vre-laserfarm v2.2.7-beta

intelliseqngs/task_mt-realign 1.1.2

intelliseqngs/task_bam-gatk-m2 1.1.2

intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

nfcore/coproid 1.1.1

A Docker image for the nf-core/coproid pipeline.

prismcmap/landing v0.2.2

jelaniwoods/appdev2021-base-rails-hotfix latest

intelliseqngs/task_vcf-qc 1.4.0

hoonbiolab/cellranger v1.0

jelaniwoods/appdev2021-base-rails latest

intelliseqngs/task_vcf-prepare 1.0.3

dg520/rsimple 1.1

nfcore/mnaseseq latest

A Docker container for the nf-core/mnaseseq pipeline.

mirekphd/ml-cpu-r35-rs 20190201

lucifer001/custom-rs-tf-multiuser gpu

gesiscss/binder-mkozturk-2dcmpe140-fa0cda f6261af265af3e5c388be9ba9969a5e640fe2e16

ocdr/ds-apps test2

alexwaldrop/metaxcan 75065864afcec43181f17ef00c8518a2d29fe8a7

Metaxcan v.0.6.6 integrative gene mapping software

veitveit/isolabeledprotocol latest

Discontinued, see github.com/ProtProtocols/IsoProt for updates

prismcmap/depmap_versions dd55695d58fb

dhspence/docker-homer latest

docker with chip-seq tool homer

nuest/rocker-versioned 3.4.1

r-ver test with semver build tags

nfcore/exoseq dev

A docker container for the ExoSeq pipeline

singnet/moses latest

tercen/runtime-r35 3.5.3-7

davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

gesiscss/singleuser-orc r2d-49e91d9

hpccbuilds/build-ubuntu-22.04 community_8.12.0-rc4

intelliseqngs/gatk-4.1.7.0-grch38-no-alt 1.0.1

afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

ctomlins/mblast latest

gesiscss/binder-matjesg-2dais-5f2019-df9f9f c588d97bc20b1345ea549a5260d2ec36137e911b

seglh/exomedepth f4716ad

rocker/r-edge latest

R support for bleeding-edge compilers

intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

beakernotebook/beaker-base latest

Base image for building beaker docker image

afcai2c/r-studio rebuild

Basic installation of R Studio.

rocker/drp latest

R-patched

hpccbuilds/build-centos-7 community_8.12.0-rc4

gene110/nipt_report latest

dragonflyscience/shellington 2021-09-14

qcdis/python-vol2birds v2.1

gesiscss/binder-numeconcopenhagen-2dlectures-2d2020-a504cd 3037261943dce17c68a5d932223d3724580e1671

nextgenusfs/funannotate-slim v1.8.15

Base funannotate image (no databases)

ashish1981/z-reference-implementation latest

rhub/centos-epel latest

dragonflyscience/wfm-reports-20.04 2022-10-14

qcdis/n-a-a-vre-pytorch v2.0-beta

nfcore/ddamsproteomics dev

A Docker image for the nf-core/ddamsproteomics pipeline.

kbase/kbase_base latest

KBase Base Image containing Core services and runtime

hpccbuilds/build-centos-8 community_8.12.0-rc4

nfcore/denovohybrid dev

A Docker Image for the nf-core/denovohybrid pipeline

afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

hpccbuilds/build-ubuntu-18.04 community_8.12.0-rc4

tercen/tercen_studio 4.0.4-1

kbase/sdkbase latest

gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52

rapporteket/base-r 4.2.2

rocker/gdal latest

Build gdal separately to avoid timeouts

gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

biocontainers/danpos v2.2.2_cv3

anzaika/selectoscope_base latest

Base image with all pipeline parts for selectoscope.

prismcmap/drc-module robust_DRC

ferlabcrsj/all-spark-notebook 3.2.0

Spark notebook images

databrewllc/data-anonymization production

veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

dhspence/docker-sicer latest

evolbioinfo/table2itol fa4b43c

The table2itol.R script makes it easy to generate iTOL annotations from spreadsheet files.