cwong23/stx_env latest

Environment for spatial pipeline

fallingstar10/gmadeomicsrocker tiny

tomasgomes/nextflow_kallisto_sc 0.3

bbeacosta/sctype latest

cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

weizhoujp/r-chtc-v1 latest

trust1/jmml latest

JMML classifier

suimye/cage_box latest

kuangda/pc12 latest

bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

abelean/seurat_desctools 4.1.0

bigomics/omicsplayground-base ub2204_v4

johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

jesusgf23/allenseurat latest

datashield/rock-dolomite-xenon 2.1.1

This DataSHIELD profile consists of the platform 'dolomite' and the profile 'xenon'.

chiajungl/smk-scrna-extra 4.3-7.30-4.3

cmccornack/crmsc latest

andrewatmp/testf latest

jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

fallingstar10/hbsigrocker latest

chiajungl/scrna-extra 4.4.0-4.4

muhengliao/r_docker2 genome

weizhoujp/rchtc 4.3.0

tariship/dev_sync_directories latest

nciccbr/ccbr_r_4.3.0 v1

nathanprovin/cellcom 1.2.2

nciccbr/ccbr_fraser_1.10.2 latest

jafoltz/sc_python 8

andrewatmp/qiime_unzip latest

dhspence/docker-rstudio-python latest

stefanucciluca/tregopathies latest

etycksen/sc_deluxe 0.6

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

gyusikhwang/tgs v1

brusconi/seurat new

biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

nfancy/scflow 0.7.4

jlphillips/csci 2025-Spring-cu118

MTSU Department of Computer Science Stack

fluentin55/singlecell_docker 1.2

jonasmrr/scrnaseq-pipeline latest

wyangwu/r4.1.2 latest

bioxfu/xseurat2 latest

robertplayer/scidap-genelists v5.0.0

chunjiesamliu/scmocha latest

denglab/vpfkit latest

yosuketanigawa/rstudio_yt latest

chiajungl/scrna 4.4.0-4.4

repbioinfo/transformgampoi latest

bioedge/edge_24_1_ubuntu18 20231115

jingxin/terrascpipe v0

jackiezhuqi/bio-rstudio latest

winuthayanon/rstudio 4.3.0

singha53/modc v0.1

cgrlab/qiime2 2023.5

btrspg/vscode-dkd-env latest

imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

gaspardr/r-env test

My R environment for analyses and development

ycli1995/bioinfo_dev 1.1.0

dnbelabc4/dnbc4dev 2.1.2

dongminshin/sc_ppl 1.71

atttilacs/ds_seurat_5_extras_hdf5r latest

etretiakov/rocker-session latest

alexsickler/toolkit_subtyping v2.0

vidhyagnanasekaran/rocker-single-cell v1

igrisch/seuratharmony latest

wilfriedguiblet/fraser v0.1

daemontus/software-cell-oracle latest

joshuatobin257/drop latest

ksinghal28/generate_pon 1.0

trust1/bethesda light

Brain tumor BethesdaV2 and EPIC (Bethesda v1) classifier box

pl92297/sceqtl latest

avi156/rocker-binder-upd 4.2.2

natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

ajhodgkinson/mitogwas latest

louisk92/spapros_genebasis v1.0

maxfieldkelsey/snakesenescence latest

image for use in snakemake

cplaisier/ccafv2_extra latest

alexthiery/archr_dev_macs2 3.0

costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

forest2000/seuratv5 latest

Update Seurat to version 5

abelean/seurat_deg 4.1.0

briansha/prepsct latest

robertplayer/scidap-qiime2 stable

btrspg/r-env cache

crukcibioinformatics/sequencingbase 9.3.4

cheyne0328/rstudio zxy

payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca