Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : rprojroot

Explore the latest package usage data for rprojroot in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,878
Total downloads: 203,672,274

More details on packages.ecosyste.ms - JSON

jupyter/all-spark-notebook x86_64-spark-3.5.0

Python, Scala, R and Spark Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 2.0.3
Latest release: about 1 year ago - 74,157,453 downloads - 2,095 dependencies
broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 1.2
Latest release: over 7 years ago - 40,948,348 downloads - 951 dependencies
jupyter/datascience-notebook x86_64-python-3.11.6

Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks

  • version: 2.0.3
Latest release: about 1 year ago - 31,656,816 downloads - 2,728 dependencies
broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 2.0.2
Latest release: 11 months ago - 31,988,536 downloads - 912 dependencies
rocker/tidyverse 4.3.2

Version-stable build of R, rstudio, and R packages

  • version: 2.0.4, 2.0.3
Latest release: about 1 year ago - 8,148,628 downloads - 858 dependencies
apache/zeppelin 0.11.0

Apache Zeppelin

  • version: 2.0.2
Latest release: 11 months ago - 3,480,279 downloads - 1,492 dependencies
coala/base pre

A simple docker image featuring coala and it's dependencies.

  • version: 1.2
Latest release: over 7 years ago - 1,940,485 downloads - 1,827 dependencies
jupyter/r-notebook x86_64-python-3.11.6

R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 2.0.3
Latest release: about 1 year ago - 1,757,302 downloads - 1,718 dependencies
rocker/verse 4.3.2

Adds tex & related publishing packages to version-locked tidyverse image

  • version: 2.0.4, 2.0.3
Latest release: about 1 year ago - 1,337,043 downloads - 1,104 dependencies
rocker/geospatial 4.3.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 2.0.3, 2.0.4
Latest release: about 1 year ago - 744,200 downloads - 1,336 dependencies
bioconductor/bioconductor_docker devel-R-devel

Bioconductor Docker Images

  • version: 2.0.4, 2.0.3
Latest release: about 1 year ago - 1,124,807 downloads - 1,397 dependencies
rocker/shiny-verse 4.3.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

  • version: 2.0.4, 2.0.3
Latest release: about 1 year ago - 949,642 downloads - 950 dependencies
veupathdb/rserve 7

  • version: 2.0.3
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
broadinstitute/viral-core latest

  • version: 1.3-2
Latest release: over 4 years ago - 151,955 downloads - 419 dependencies
ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 2.0.3
Latest release: 12 months ago - 124,831 downloads - 1,028 dependencies
dit4c/dit4c-container-qgis latest

DIT4C image for QGIS

  • version: 1.2
Latest release: almost 8 years ago - 115,438 downloads - 884 dependencies
ashish1981/x86-r-z-appln latest

  • version: 1.3-2
Latest release: over 3 years ago - 106,632 downloads - 1,150 dependencies
broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 2.0.2
Latest release: over 2 years ago - 102,887 downloads - 846 dependencies
ashish1981/shinyapp-sarb latest

  • version: 2.0.2
Latest release: over 3 years ago - 91,367 downloads - 1,042 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 2.0.3
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 1.3-2
Latest release: about 1 year ago - 92,270 downloads - 1,220 dependencies
rocker/binder 4.3.2

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 2.0.3, 2.0.4
Latest release: about 1 year ago - 95,871 downloads - 2,239 dependencies
rocker/ropensci latest

  • version: 1.3-2
Latest release: over 6 years ago - 88,618 downloads - 1,589 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 2.0.2
Latest release: 11 months ago - 86,066 downloads - 912 dependencies
rocker/ml 4.3.2

Docker images with R + GPU support for machine learning libraries

  • version: 2.0.3, 2.0.4
Latest release: 11 months ago - 66,768 downloads - 939 dependencies
ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 2.0.3
Latest release: about 1 year ago - 57,229 downloads - 916 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 2.0.2
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
nfcore/chipseq dev

A docker image for nf-core/chipseq

  • version: 2.0.2
Latest release: over 3 years ago - 50,176 downloads - 309 dependencies
ashish1981/s390x-r-appln-z latest

  • version: 2.0.2
Latest release: over 3 years ago - 44,192 downloads - 1,475 dependencies
180a51c0/gh-action-buildapp latest

  • version: 1.3-2
Latest release: over 4 years ago - 48,804 downloads - 1,987 dependencies
nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

  • version: 2.0.3
Latest release: about 1 year ago - 40,624 downloads - 738 dependencies
rocker/ml-verse 4.3.2

  • version: 2.0.3, 2.0.4
Latest release: 11 months ago - 34,310 downloads - 1,414 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 2.0.3
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
fazenda/rsmd 64c1b962-4-14

  • version: 2.0.3
Latest release: about 2 years ago - 20,306 downloads - 180 dependencies
rocker/cuda 4.3.2

NVIDIA CUDA libraries added to Rocker images

  • version: 2.0.3, 2.0.4
Latest release: 11 months ago - 33,382 downloads - 415 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 2.0.3
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.3-2
Latest release: 12 months ago - 14,674 downloads - 894 dependencies
ashish1981/zreferenceimplementation d17052022

  • version: 1.3-2
Latest release: over 2 years ago - 14,146 downloads - 1,150 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18

  • version: 1.3-2
Latest release: over 1 year ago - 13,462 downloads - 747 dependencies
vanallenlab/sv-pipeline filter_gt_029fa3b

  • version: 2.0.3
Latest release: over 1 year ago - 22,757 downloads - 1,231 dependencies
biocontainers/assemblytics v1.0ds-1-deb_cv1

  • version: 1.3-2
Latest release: over 5 years ago - 9,370 downloads - 632 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 1.3-2
Latest release: almost 5 years ago - 12,227 downloads - 534 dependencies
biocontainers/qcumber v1.0.14dfsg-1-deb_cv1

  • version: 1.3-2
Latest release: over 5 years ago - 9,305 downloads - 689 dependencies
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 8,456 downloads - 644 dependencies
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,963 downloads - 831 dependencies
biocontainers/nanook v1.33dfsg-1-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,924 downloads - 733 dependencies
rocker/r-rmd latest

Rocker container for Rmarkdown packages

  • version: 1.3-2
Latest release: over 4 years ago - 8,177 downloads - 584 dependencies
biocontainers/paleomix v1.2.13.3-1-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,507 downloads - 1,167 dependencies
biocontainers/roary v3.12.0dfsg-2-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,506 downloads - 1,110 dependencies
biocontainers/snakemake v5.4.0-1-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,504 downloads - 710 dependencies
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1

  • version: 1.3-2
Latest release: about 5 years ago - 7,465 downloads - 857 dependencies
artemklevtsov/r-alpine pkgdev

R docker images based on the alpine:latest

  • version: 1.3-2
Latest release: over 6 years ago - 7,390 downloads - 124 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 2.0.3
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 2.0.2
Latest release: over 3 years ago - 5,980 downloads - 1,474 dependencies
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

  • version: 2.0.2
Latest release: over 3 years ago - 5,337 downloads - 2,109 dependencies
hylleraas/singleuser 27

  • version: 2.0.2
Latest release: almost 2 years ago - 11,511 downloads - 2,614 dependencies
broadinstitute/viral-assemble latest

  • version: 1.3-2
Latest release: over 4 years ago - 4,464 downloads - 431 dependencies
broadinstitute/viral-phylo 2.0.21.5

  • version: 1.3-2
Latest release: over 4 years ago - 4,426 downloads - 431 dependencies
mesosphere/mesosphere-data-toolkit latest

  • version: 1.3-2
Latest release: almost 6 years ago - 4,263 downloads - 1,270 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 2.0.2
Latest release: about 3 years ago - 3,931 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 2.0.2
Latest release: about 3 years ago - 3,660 downloads - 1,218 dependencies
rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

  • version: 1.3-2
Latest release: almost 5 years ago - 3,524 downloads - 843 dependencies
ccdlstaging/dr_smasher 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.3-2
Latest release: 12 months ago - 4,929 downloads - 884 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 2.0.2
Latest release: almost 4 years ago - 3,040 downloads - 1,044 dependencies
ocdr/dkube-datascience-rs-sk-cpu-multiuser v1.1.1-tiji-test

  • version: 1.3-2
Latest release: over 2 years ago - 3,480 downloads - 751 dependencies
ocdr/dkube-datascience-rs-tf-cpu v2.0.0-tiji-test

  • version: 1.3-2
Latest release: over 2 years ago - 3,001 downloads - 722 dependencies
ashish1981/s390x-clefos-shiny latest

  • version: 2.0.2
Latest release: over 3 years ago - 2,992 downloads - 1,467 dependencies
ccdlstaging/dr_illumina 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.3-2
Latest release: 12 months ago - 3,448 downloads - 893 dependencies
ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.9-18

  • version: 1.3-2
Latest release: over 1 year ago - 3,150 downloads - 747 dependencies
patroonorg/patroondeps latest

  • version: 2.0.3
Latest release: over 1 year ago - 2,754 downloads - 1,677 dependencies
ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-18

  • version: 1.3-2
Latest release: over 1 year ago - 2,777 downloads - 841 dependencies
rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

  • version: 1.3-2
Latest release: almost 5 years ago - 2,657 downloads - 591 dependencies
ashish1981/x86-rbase-shiny-plumber d300422

  • version: 1.3-2
Latest release: over 2 years ago - 2,623 downloads - 955 dependencies
gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

  • version: 1.3-2
Latest release: about 4 years ago - 2,479 downloads - 2,536 dependencies
bgruening/docker-jupyter-notebook latest

Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

  • version: 2.0.2
Latest release: over 3 years ago - 2,533 downloads - 1,920 dependencies
snoopycrimecop/training-notebooks master_merge_daily

A set of Python Notebooks to demonstrate how to access the images and metadata from OMERO

  • version: 1.3-2
Latest release: over 3 years ago - 2,250 downloads - 2,866 dependencies
broadinstitute/terra-jupyter-gatk 8444561

  • version: 1.3-2
Latest release: over 4 years ago - 2,239 downloads - 3,913 dependencies
mesosphere/mesosphere-jupyter-service latest

  • version: 1.3-2
Latest release: almost 6 years ago - 2,176 downloads - 2,835 dependencies
alligatorcompany/acs-exasol 8.23.0.1

exasol docker image with additional checks

  • version: 2.0.3
Latest release: about 1 year ago - 2,029 downloads - 2,085 dependencies
databrewllc/odk-form-extraction 3ffdc02

  • version: 2.0.3
Latest release: about 1 year ago - 33,252 downloads - 747 dependencies