yinxiu/variantalker v2.0

NextFlow pipeline to functionally annotate DNA variants in VCF files

srynobio/diagnostic_rnaseq latest

jenfisher7/rstudio_sbae latest

hoonbiolab/hmftools_cnv v3.8.4

mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

dabbleofdevops/r-datascience 4.2.2

ntobias85/abe_repo rbuild_reports_1.0.1

madhu99/sb6 latest

hoonbiolab/hmftools_sv v.2.13.2

brianyee/rnaseq snakemake_1.0.0

jmonlong/terra-rstudio-custom 0.0.1

shl198/rna_ppl latest

jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

mdivr/chicago v2

firriver/crvs latest

mfsentma/rna latest

ucigenomics/spatiallibd latest

samplix/droplet-viewer-internal latest

compbiocore/jupyterhub-docker-images-jh_image 20230524

weishwu/diffbind 3.6.5

wlc27/dcanr v1

chiajungl/seurat 4.4.0-4.4

qx658/eas-shiny latest

fgualdr/env_perm_motifs latest

fgualdr/envr_txdb latest

yaobio/archr-4g 1.0.2

Docker images for ArchR (Analysis of Regulatory Chromatin in R)

ericsalomaki/mirna 071723

archang/seurat-zellk latest

winuthayanon/seurat 4.3.0

brianyee/cropseq-essentials 1.0.0

chlazaris/dge_env 0.1

cjchen/gxuclass 1.0

smemane20/error_thres_amd_64 latest

preethiilumina/diffbind 1.5.1

fixed genome name

fallingstar10/gmadeomicsrocker tiny

tomasgomes/nextflow_kallisto_sc 0.3

cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

timothystephens/genotype_samples 0.0.1

trust1/jmml latest

JMML classifier

leoschmutterer/regularity v1.1

suimye/cage_box latest

fgualdr/env_motifs latest

bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

scao/microsec 0.0.1

abelean/seurat_desctools 4.1.0

bumproo/rnaseqclass23 latest

bigomics/omicsplayground-base ub2204_v4

johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

sophiewebster/mhe latest

jesusgf23/allenseurat latest

datashield/rock-dolomite-xenon 2.1.1

This DataSHIELD profile consists of the platform 'dolomite' and the profile 'xenon'.

cmccornack/crmsc latest

ilariap/r_cnmops_exomedepth latest

Docker container containing panel-cnMops, cnMops and Exomedepth

eppicenter/mad4hatter latest

omicschef/rnaseqchef v1.1.4

RNAseqChef, an RNA-seq data controller highlighting gene expression features

commander121/rmarkdown 4.4.0d-b3

qdidiscoveryservices/vcfcompare 1.0

cjchen/tbtoolszone 2.0

fallingstar10/hbsigrocker latest

chiajungl/scrna-extra 4.4.0-4.4

cjchen/scauclass_2023 1.0

sridnona/r4.2.0 v1

lroser/databricksbio latest

tariship/dev_sync_directories latest

nciccbr/ccbr_r_4.3.0 v1

sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

jpdodson/dsrna_docker latest

almurphy/mungesumstats latest

dhspence/docker-rstudio-python latest

gru4/scan2workinghg38 latest

indraniel/chip-pipeline-annotation v1

stefanucciluca/tregopathies latest

gru4/scan2fixedhg38 latest

etycksen/sc_deluxe 0.6

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

mshriver01/share_task_archr latest

mknudson/share_task_cell_annotation mei-cell-annotation

brusconi/seurat new

omicschef/epigenomechef v1.1.5

fluentin55/singlecell_docker 1.2

alexthiery/archr_seurat_signac_mega 3.2

andrewsg/archr dev

wyangwu/r4.1.2 latest

bioxfu/xseurat2 latest

robertplayer/scidap-genelists v5.0.0

gevrony/hidef-seq 3.0

arnstrm2/genespace 1.1.4

chunjiesamliu/scmocha latest

srynobio/rna latest

scwatts/bolt_gpgr 0.1.0

mfilipuz/r_v423 23.05.09

fgualdr/env_norm_gr_idr latest