Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : qvalue

Explore the latest package usage data for qvalue in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 142
Total downloads: 185,748

More details on packages.ecosyste.ms - JSON

broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 2.10.0
Latest release: over 2 years ago - 102,887 downloads - 846 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 2.32.0
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 2.28.0
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1

  • version: 2.14.1
Latest release: about 5 years ago - 7,963 downloads - 831 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 2.28.0
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
kbase/kbase sdkbase.latest

  • version: 1.36.0
Latest release: over 6 years ago - 4,258 downloads - 2,934 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 2.22.0
Latest release: almost 4 years ago - 3,040 downloads - 1,044 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 2.14.1
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
veitveit/isolabeledprotocol latest

Discontinued, see github.com/ProtProtocols/IsoProt for updates

  • version: 2.10.0
Latest release: about 6 years ago - 715 downloads - 2,000 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 1.36.0
Latest release: about 8 years ago - 510 downloads - 3,106 dependencies
kbase/sdkbase latest

  • version: 1.36.0
Latest release: almost 8 years ago - 476 downloads - 2,934 dependencies
anzaika/selectoscope_base latest

Base image with all pipeline parts for selectoscope.

  • version: 2.6.0
Latest release: almost 8 years ago - 441 downloads - 1,116 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 2.30.0
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 2.20.0
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
veitveit/complexbrowser release-1.6

  • version: 2.30.0, 2.34.0
Latest release: 12 months ago - 316 downloads - 1,296 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 2.12.0
Latest release: over 6 years ago - 271 downloads - 9,222 dependencies
veitveit/polystest release-1.3.4

  • version: 2.32.0
Latest release: over 1 year ago - 245 downloads - 838 dependencies
koki/sctensor-experiments 20220208

  • version: 2.26.0
Latest release: almost 3 years ago - 206 downloads - 2,071 dependencies
koki/biocdev 20230818

  • version: 2.33.0
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
chgyi/bio 3.5.1

  • version: 2.12.0
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
biocontainers/bioconductor-qvalue v2.6.0-1-deb_cv1

  • version: 2.6.0
Latest release: over 6 years ago - 152 downloads - 434 dependencies
chgyi/metaware_rna_denovo latest

  • version: 2.14.1
Latest release: over 5 years ago - 132 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 2.12.0
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 2.25.0
Latest release: about 3 years ago - 111 downloads - 2,087 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 2.12.0
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
crukmi/mesa main

  • version: 2.29.0
Latest release: about 2 years ago - 91 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 2.26.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
veitveit/isoprot latest

  • version: 2.14.1
Latest release: over 5 years ago - 86 downloads - 2,182 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 2.30.0
Latest release: almost 2 years ago - 75 downloads - 382 dependencies
hdsu/etbii2023 latest

  • version: 2.26.0
Latest release: almost 2 years ago - 73 downloads - 358 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 2.12.0
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 2.18.0, 2.30.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 2.12.0
Latest release: over 6 years ago - 42 downloads - 9,405 dependencies
crukmi/mesa_dependencies latest

  • version: 2.30.0
Latest release: over 1 year ago - 63 downloads - 1,393 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 2.22.0
Latest release: over 1 year ago - 48 downloads - 912 dependencies
veitveit/isoptmprot latest

  • version: 2.16.0
Latest release: over 5 years ago - 38 downloads - 2,207 dependencies
koki/urchin_workflow_seurat 20230616

  • version: 2.30.0
Latest release: over 1 year ago - 63 downloads - 1,471 dependencies
veitveit/coexpresso latest

  • version: 2.26.0
Latest release: over 2 years ago - 39 downloads - 1,733 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 2.18.0
Latest release: almost 5 years ago - 34 downloads - 10,669 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 2.12.0
Latest release: over 6 years ago - 29 downloads - 9,414 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 2.30.0
Latest release: almost 2 years ago - 35 downloads - 897 dependencies
chgyi/rdev 3.5.1

  • version: 2.12.0
Latest release: over 6 years ago - 24 downloads - 435 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 2.32.0
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 2.18.0
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
chgyi/trinity 2.8.4

  • version: 2.10.0
Latest release: over 5 years ago - 13 downloads - 795 dependencies
byjin/sqtl 2.0

r docker for sqtl-seeker2( try )

  • version: 2.30.0
Latest release: almost 2 years ago - 27 downloads - 557 dependencies
kisudsoe/r-base latest

  • version: 2.30.0
Latest release: over 1 year ago - 83 downloads - 1,107 dependencies
viascientific/rstudio-app 1.0

  • version: 2.30.0
Latest release: over 1 year ago - 35 downloads - 1,074 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 2.30.0
Latest release: almost 2 years ago - 13 downloads - 598 dependencies
crpeters/r-methylkit 4.2.1

  • version: 2.30.0
Latest release: almost 2 years ago - 12 downloads - 383 dependencies
markataylor/r_yufree v1.0.0

  • version: 2.30.0
Latest release: almost 2 years ago - 14 downloads - 1,514 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 2.18.0
Latest release: about 4 years ago - 10 downloads - 431 dependencies
veitveit/omicsq latest

  • version: 2.34.0
Latest release: about 2 years ago - 14 downloads - 887 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 2.32.0
Latest release: about 1 year ago - 33 downloads - 1,150 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 2.30.0
Latest release: almost 2 years ago - 10 downloads - 598 dependencies
stormgod/deepmaps-cpu latest

  • version: 2.30.0
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
tamaraperteghella/r4_hormonit latest

  • version: 2.26.0
Latest release: over 1 year ago - 13 downloads - 1,528 dependencies
bixbeta/cluster_profiler v1

  • version: 2.22.0
Latest release: almost 2 years ago - 8 downloads - 1,038 dependencies
jieliu4wustl/wustl v0.1_20230907

  • version: 2.30.0, 2.18.0
Latest release: about 1 year ago - 4,483 downloads - 1,124 dependencies
chaunceyzhou/awesome_rnaseq v1.3

  • version: 2.18.0
Latest release: about 1 year ago - 16 downloads - 465 dependencies
weishwu/chipseeker 1.34.1

  • version: 2.30.0
Latest release: over 1 year ago - 34 downloads - 423 dependencies
andyvs/testimage 3.0

  • version: 2.30.0
Latest release: over 1 year ago - 11 downloads - 376 dependencies
viascientific/deseq2-docker 2.0

  • version: 2.30.0
Latest release: over 1 year ago - 36 downloads - 375 dependencies
13883956158/shinyproxy-r 4.2.2

  • version: 2.30.0
Latest release: almost 2 years ago - 8 downloads - 312 dependencies
kbase/rast_base 1.9.1

  • version: 1.36.0
Latest release: over 2 years ago - 9 downloads - 2,027 dependencies
payne6861/clutserprofiler v1.0.0

  • version: 2.26.0
Latest release: almost 2 years ago - 8 downloads - 1,793 dependencies
compbiocore/dscov_sct 20221201

  • version: 2.30.0
Latest release: almost 2 years ago - 8 downloads - 1,031 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 2.18.0
Latest release: almost 5 years ago - 8 downloads - 2,128 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 2.30.0
Latest release: over 1 year ago - 8 downloads - 1,038 dependencies
jenfisher7/rstudio_sbae latest

  • version: 2.30.0
Latest release: almost 2 years ago - 8 downloads - 1,604 dependencies
jinlongru/viroprofiler-dvf latest

  • version: 2.12.0
Latest release: almost 2 years ago - 12 downloads - 241 dependencies
shl198/rna_ppl latest

  • version: 2.28.0
Latest release: almost 2 years ago - 20 downloads - 2,099 dependencies
payne6861/stereonote_non_conda_clusterprofiler_enrichplot v1.0.1

stereonote_non_conda_clusterprofiler_enrichplot

  • version: 2.26.0
Latest release: almost 2 years ago - 8 downloads - 1,689 dependencies
firriver/crvs latest

  • version: 2.26.0
Latest release: over 1 year ago - 8 downloads - 1,490 dependencies
mfsentma/rna latest

  • version: 2.26.0
Latest release: over 1 year ago - 7 downloads - 807 dependencies
mercury/nf_qc_scrna v2

  • version: 2.22.0
Latest release: over 1 year ago - 10 downloads - 548 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 2.30.0
Latest release: over 1 year ago - 25 downloads - 1,319 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 2.30.0
Latest release: over 1 year ago - 11 downloads - 3,115 dependencies
weishwu/diffbind 3.6.5

  • version: 2.28.0
Latest release: almost 2 years ago - 10 downloads - 1,507 dependencies
wlc27/dcanr v1

  • version: 2.30.0
Latest release: almost 2 years ago - 10 downloads - 1,681 dependencies
ericsalomaki/mirna 071723

  • version: 2.26.0
Latest release: over 1 year ago - 10 downloads - 1,834 dependencies
winuthayanon/seurat 4.3.0

  • version: 2.30.0
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
hbadrane/fungap version3

  • version: 2.18.0
Latest release: about 1 year ago - 44 downloads - 479 dependencies
tamaraperteghella/r4_gencode latest

  • version: 2.26.0
Latest release: over 1 year ago - 8 downloads - 1,460 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 2.26.0
Latest release: over 1 year ago - 9 downloads - 2,274 dependencies
cjchen/gxuclass 1.0

  • version: 2.32.0
Latest release: over 1 year ago - 12 downloads - 657 dependencies
preethiilumina/diffbind 1.5

fixed genome name

  • version: 2.30.0
Latest release: 9 months ago - 155 downloads - 626 dependencies
louisk92/spapros_scpnmf v1.0

  • version: 2.32.0
Latest release: over 1 year ago - 10 downloads - 1,422 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 2.32.0
Latest release: 8 months ago - 51 downloads - 1,224 dependencies
phenomedb/phenomedb-api-npc latest

  • version: 2.30.0
Latest release: over 1 year ago - 10 downloads - 1,310 dependencies
haokimriid/r-base latest

  • version: 2.32.0
Latest release: over 1 year ago - 9 downloads - 385 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 2.32.0
Latest release: 9 months ago - 22 downloads - 1,356 dependencies
bianca7/clusterprofiler latest

  • version: 2.33.0
Latest release: over 1 year ago - 11 downloads - 1,315 dependencies