broadinstitute/fungal_gatk4 latest

tercen/dartrusttidy travis-17

gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

gesiscss/binder-palmoreck-2ddockerfiles-2dfor-2dbinder-f98a72 e6751152f3669d7fa6b0892ed229918a75b153df

dceoy/r-tidyverse latest

R with tidyverse

dragonflyscience/dragonverse-18.04 latest

nfcore/smartseq2 dev

A docker container for the nf-core/smartseq2 pipeline.

afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

kbase/narrprereq 1.3

Narrative prerequisite base image (used by kbase/narrabase).

kbase/metrics latest

ocdr/dkube-datascience-rs-tf-gpu v2.0.0-tiji-test

nfcore/airrflowreport dev

dragonflyscience/sharknado 2023-07-23

recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

kbase/errorlogging develop

nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

biocontainers/phylotools v0.2.4_cv1

afcai2c/python-r-ai latest

Image with Python and R packages

tercen/runtime-r40 4.0.4-6

nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

sourcegraph/codeintel-r insiders

intelliseqngs/task_bam-bsqr 1.2.2

nfcore/slamseq dev

A docker image for nf-core/slamseq

intelliseqngs/task_bam-filter-mismatch 1.4.1

prismcmap/reports 94804f34cf31

intelliseqngs/gatk dbsnp-genotyping_grch38-no-alt-analysis-set_1.0.4-chrY-and-the-rest

nfcore/nanoseq dev

Nanopore demultiplexing, QC and alignment pipeline

nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

nfcore/proteomicslfq dev

A Docker Container for label free quantification for proteomics data.

nfcore/diaproteomics dev

A Docker container for nf-core/diaproteomics

intelliseqngs/task_mt-varcall-mutect2 1.1.2

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

intelliseqngs/gatk-4.2.0.0 1.0.0

intelliseqngs/task_vcf-concat 1.0.4

intelliseqngs/task_vcf-anno-cosmic 2.0.0

intelliseqngs/task_vcf-uniq 1.0.0

intelliseqngs/task_mt-realign 1.1.2

intelliseqngs/task_bam-gatk-m2 1.1.2

intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

prismcmap/landing v0.2.2

intelliseqngs/task_vcf-prepare 1.0.3

dg520/rsimple 1.1

mirekphd/ml-cpu-r35-rs 20190201

lucifer001/custom-rs-tf-multiuser gpu

gesiscss/binder-mkozturk-2dcmpe140-fa0cda f6261af265af3e5c388be9ba9969a5e640fe2e16

ocdr/ds-apps test2

prismcmap/depmap_versions dd55695d58fb

tercen/runtime-r35 3.5.3-7

davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

gesiscss/singleuser-orc r2d-49e91d9

afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

gene110/nipt_report latest

dragonflyscience/shellington 2021-09-14

nextgenusfs/funannotate-slim v1.8.15

Base funannotate image (no databases)

ashish1981/z-reference-implementation latest

dragonflyscience/wfm-reports-20.04 2022-10-14

afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

tercen/tercen_studio 4.0.4-1

gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52

rocker/gdal latest

Build gdal separately to avoid timeouts

gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

prismcmap/drc-module robust_DRC

ferlabcrsj/all-spark-notebook 3.2.0

Spark notebook images

databrewllc/data-anonymization production

dhspence/docker-sicer latest

fazenda/r-testing latest

ESTATCAMP's R testing environment.

qdidiscoveryservices/limma-voom 4.2.0

phidata/jupyterlab 3.5.2

openmicroscopy/training-notebooks 0.7

A set of Notebooks to demonstrate how to access the images and metadata from OMERO

tercen/operator_base 1.0.5

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

prismcmap/norm-module 26be7aa8ab48

dragonflyscience/dragonforest-20.04 20220711_1155

nuest/ten-simple-rules-dockerfiles latest

intelliseqngs/gatk-4.2.4.1-hg38 1.0.0

cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

kraigerl95/jupyternotebook-r stable

Jupyter Notebook wiht personal changes

gesiscss/binder-arnim-2drstan-2dbinder-55f747 090d5b5cb3a32d8b6f3ff1a32478165045a813e2

almahmoud/bioconductor_docker RELEASE_3_17

vanallenlab/sv-pipeline-qc gnomad_v3_qc

gesiscss/binder-bollwyvl-2djupyterlab-2dlsp-902099 53686d0e9aaaba4590911e5cc745f7e933bcca08

intelliseqngs/task_vcf-concat-beagle 1.1.3

gesiscss/binder-jupyterlab-2djupyterlab-2ddemo-b2f8d0 5a5eb6bb04250b199a1cbb529e744075216a17a5

datalabauth/covid19 latest

Webapp for visualizing COVID-19 data

intelliseqngs/task_vcf-vqsr-snp-recalib-hg38 1.1.2

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-hg38 1.0.2-chrY-and-the-rest

dhspence/docker-basestation latest

intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

qdidiscoveryservices/py3_cellranger 6.1.2

inseefrlab/onyxia-sparkr r4.3.2-spark3.5.0-2024.01.15

A minimal R environment configured to use Spark through the SparkR package.

openanalytics/shinyproxy-juypter-datascience latest