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An open API service providing dependency metadata for docker images.

Package Usage : cran : optparse

Explore the latest package usage data for optparse in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 369
Total downloads: 35,024,330

More details on packages.ecosyste.ms - JSON

hoonbiolab/aa_tools v2.3.1.1

  • version: 1.7.1
Latest release: over 3 years ago - 34 downloads - 432 dependencies
hoonbiolab/pyclone v1.1

  • version: 1.6.6
Latest release: over 3 years ago - 25 downloads - 675 dependencies
shiramaty/qiime2-sratools latest

  • version: 1.7.3
Latest release: over 2 years ago - 23 downloads - 319 dependencies
edkang0925/diffutr latest

  • version: 1.7.3
Latest release: over 2 years ago - 44 downloads - 532 dependencies
intelliseqngs/gatk-4.3.0.0 1.0.0

  • version: 1.6.4
Latest release: over 2 years ago - 1,554 downloads - 1,038 dependencies
yiluxiangbei/pumpkin-gatk-notebook 1.0

  • version: 1.6.4
Latest release: over 3 years ago - 19 downloads - 1,570 dependencies
gene110/r_multi_st latest

  • version: 1.7.1
Latest release: almost 3 years ago - 7 downloads - 666 dependencies
intelliseqngs/broad-institute-hg38 1.0.0

  • version: 1.3.2
Latest release: over 5 years ago - 15 downloads - 930 dependencies
alleninst/arrow_scrattch_hmapping_on_hpc latest

  • version: 1.7.1
Latest release: over 2 years ago - 58 downloads - 1,556 dependencies
gene110/reportnipt latest

  • version: 1.6.4
Latest release: about 4 years ago - 7 downloads - 562 dependencies
recetox/chem_identifier_converter latest

  • version: 1.6.4
Latest release: almost 5 years ago - 34 downloads - 194 dependencies
intelliseqngs/gatk-4.1.6.0-grch38-no-alt 1.0.0

  • version: 1.3.2
Latest release: over 5 years ago - 16 downloads - 437 dependencies
hoonbiolab/hmftools_purple v3.7.2

  • version: 1.7.3
Latest release: over 2 years ago - 17 downloads - 270 dependencies
hoonbiolab/hmftools_snv v3.2.2

  • version: 1.7.3
Latest release: over 2 years ago - 24 downloads - 271 dependencies
yumyai/libmiome 0.0.1

Microbiome library

  • version: 1.7.1
Latest release: over 2 years ago - 55 downloads - 529 dependencies
hoonbiolab/absolute v1.5

  • version: 1.7.3
Latest release: over 2 years ago - 112 downloads - 346 dependencies
hoonbiolab/testbattenberg v1.0

  • version: 1.7.3
Latest release: over 2 years ago - 24 downloads - 325 dependencies
sebimer/samba-v4-qiime2 2024.2

  • version: 1.7.3
Latest release: over 1 year ago - 117 downloads - 583 dependencies
vegesnam/metaboanalyst 6thnov2024

  • version: 1.7.3
Latest release: 9 months ago - 190 downloads - 358 dependencies
emersonchao/dsc180b latest

  • version: 1.7.3
Latest release: over 2 years ago - 57 downloads - 2,266 dependencies
gene110/r_ecd_img latest

  • version: 1.7.1
Latest release: over 3 years ago - 6 downloads - 533 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 1.7.3
Latest release: over 2 years ago - 18 downloads - 1,935 dependencies
hoonbiolab/align_dan v1.3

  • version: 1.6.6
Latest release: almost 4 years ago - 8 downloads - 466 dependencies
gmillot/immcantation_v1.1 gitlab_v10.0

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v10.0

  • version: 1.7.1
Latest release: over 2 years ago - 25 downloads - 1,438 dependencies
gene110/r3.6_ecd latest

  • version: 1.6.4
Latest release: over 3 years ago - 6 downloads - 579 dependencies
yiluxiangbei/pumpkin-gatk 1.0

  • version: 1.6.4
Latest release: over 3 years ago - 16 downloads - 587 dependencies
tnnandi/saige-doe 2

  • version: 1.7.3
Latest release: almost 2 years ago - 156 downloads - 1,259 dependencies
ikeller13/r-st-normalising 4.2.2

  • version: 1.7.3
Latest release: over 2 years ago - 15 downloads - 209 dependencies
albertea/velocyto_reports 01

  • version: 1.6.1
Latest release: over 2 years ago - 56 downloads - 167 dependencies
ctomlins/coffee latest

  • version: 1.6.6
Latest release: almost 4 years ago - 34 downloads - 92 dependencies
intelliseqngs/gatk-4.1.9.0-grch38-no-alt 1.0.0

  • version: 1.6.4
Latest release: over 4 years ago - 17 downloads - 677 dependencies
mbaardwijk/nf-core-somaticcnv latest

  • version: 1.7.3
Latest release: over 2 years ago - 20 downloads - 118 dependencies
denghb001/centos v1.1

  • version: 1.7.3
Latest release: over 2 years ago - 21 downloads - 1,193 dependencies
kbase/rast_base 1.9.1

  • version: 1.3.0
Latest release: over 3 years ago - 42 downloads - 2,027 dependencies
gmillot/alohomora_merlin_v2.0 gitlab_v9.4

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.4

  • version: 1.6.6
Latest release: over 2 years ago - 21 downloads - 60 dependencies
gesiscss/binder-smwindecker-2dvic-2ecarbon-d873b3 1b28c38ab9973169172ffcdb72817e9153567aac

  • version: 1.6.4
Latest release: over 5 years ago - 13 downloads - 395 dependencies
hoonbiolab/clustersv v1.1

  • version: 1.6.6
Latest release: over 3 years ago - 22 downloads - 718 dependencies
hoonbiolab/hmftools_linx v1.23.1

  • version: 1.7.3
Latest release: over 2 years ago - 21 downloads - 988 dependencies
zjnolen/ngsld 1.2.0

A simple docker image of ngsLD - a program to estimate pairwise linkage disequilibrium (LD)

  • version: 1.6.4
Latest release: almost 2 years ago - 313 downloads - 383 dependencies
srynobio/diagnostic_rnaseq latest

  • version: 1.7.3
Latest release: over 2 years ago - 168 downloads - 1,441 dependencies
jxprismdocker/test_clincnv latest

  • version: 1.7.3
Latest release: about 2 years ago - 27 downloads - 517 dependencies
cbgr/cobind 0.9.1

Necessary software to run COBIND pipeline.

  • version: 1.7.3
Latest release: over 1 year ago - 136 downloads - 1,369 dependencies
hoonbiolab/msisensor-pro v1.0

  • version: 1.6.6
Latest release: about 3 years ago - 15 downloads - 688 dependencies
hoonbiolab/hmftools_cnv v3.8.4

  • version: 1.7.3
Latest release: about 2 years ago - 98 downloads - 985 dependencies
bicore/scrattch_mapping 0.51

  • version: 1.7.3, 1.7.1
Latest release: over 1 year ago - 753 downloads - 832 dependencies
cbgr/jaspar_lola_container 0.1

  • version: 1.7.3
Latest release: about 2 years ago - 54 downloads - 1,242 dependencies
ntobias85/abe_repo rbuild_reports_1.0.1

  • version: 1.7.3
Latest release: about 1 year ago - 60 downloads - 1,339 dependencies
paulhager2/atn latest

  • version: 1.7.3
Latest release: over 2 years ago - 80 downloads - 1,011 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.7.3
Latest release: about 2 years ago - 56 downloads - 2,387 dependencies
infuseaictiml/model-r-keras-mnist v0.2.0

  • version: 1.6.6
Latest release: over 2 years ago - 17 downloads - 508 dependencies
bicore/gcs_10x_rnaseq_qc 4.2.0

  • version: 1.7.1
Latest release: over 2 years ago - 28 downloads - 1,454 dependencies
firriver/crvs latest

  • version: 1.7.3
Latest release: over 2 years ago - 39 downloads - 1,490 dependencies
mfsentma/rna latest

  • version: 1.7.3
Latest release: over 2 years ago - 12 downloads - 807 dependencies
mercury/nf_qc_scrna v2

  • version: 1.7.1
Latest release: about 2 years ago - 29 downloads - 548 dependencies
pl92297/rtracklayer latest

  • version: 1.6.6
Latest release: over 2 years ago - 32 downloads - 520 dependencies
samplix/droplet-viewer-internal latest

  • version: 1.7.3
Latest release: over 2 years ago - 31 downloads - 568 dependencies
peterdjames/r-w-kdb-image-simple latest

  • version: 1.6.6
Latest release: about 2 years ago - 57 downloads - 1,645 dependencies
alexthiery/r_sqldf 0.2

  • version: 1.7.1
Latest release: over 2 years ago - 36 downloads - 1,491 dependencies
sharvaribatchx/dada2-filter-learn-errors latest

  • version: 1.7.3
Latest release: over 2 years ago - 14 downloads - 536 dependencies
fgualdr/env_perm_motifs latest

  • version: 1.7.3
Latest release: about 2 years ago - 31 downloads - 584 dependencies
senbaikang/sieve_benchmark 0.2

Benchmarking environment for SIEVE (https://github.com/szczurek-lab/SIEVE_benchmark_pipeline)

  • version: 1.7.1
Latest release: over 2 years ago - 86 downloads - 699 dependencies
hoonbiolab/rbase v4.1.0

  • version: 1.7.3
Latest release: over 2 years ago - 224 downloads - 314 dependencies
mcrotti1/ont_course latest

  • version: 1.7.3
Latest release: over 2 years ago - 38 downloads - 434 dependencies
p4rkerw/vartrix 1.0

  • version: 1.6.4
Latest release: over 2 years ago - 48 downloads - 1,020 dependencies
tamaraperteghella/r4_gencode latest

  • version: 1.7.1
Latest release: about 2 years ago - 20 downloads - 1,460 dependencies
qcdis/traits-computation-marylm88 latest

  • version: 1.7.3
Latest release: about 2 years ago - 17 downloads - 2,178 dependencies
philiplin1212/gatk latest

  • version: 1.6.4
Latest release: over 2 years ago - 15 downloads - 1,137 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.7.3
Latest release: about 2 years ago - 44 downloads - 1,604 dependencies
smemane20/error_thres_amd_64 latest

  • version: 1.7.3
Latest release: about 2 years ago - 20 downloads - 618 dependencies
khoulaha/shatterseek v1.0.0

  • version: 1.6.6
Latest release: over 2 years ago - 28 downloads - 664 dependencies
sanodockerjfcr/r_env latest

  • version: 1.7.3
Latest release: almost 2 years ago - 35 downloads - 466 dependencies
arihueb/conipher_env latest

  • version: 1.7.3
Latest release: almost 2 years ago - 57 downloads - 422 dependencies
bbeacosta/sctype latest

  • version: 1.7.3
Latest release: almost 2 years ago - 49 downloads - 1,391 dependencies
buddej/scshc 0.1.0

  • version: 1.7.3
Latest release: about 2 years ago - 17 downloads - 950 dependencies
tamaraperteghella/r4_base latest

  • version: 1.7.1
Latest release: about 2 years ago - 23 downloads - 1,339 dependencies
mattiaficarellilcpuk/lcphaomicsbioinfotools latest

  • version: 1.7.3
Latest release: almost 2 years ago - 17 downloads - 727 dependencies
bmgcode/open_targets v1

  • version: 1.7.3
Latest release: almost 2 years ago - 34 downloads - 546 dependencies
qcdis/size-density-marylm88 latest

  • version: 1.7.3
Latest release: about 2 years ago - 18 downloads - 2,178 dependencies
qcdis/data-filtering-marylm88 latest

  • version: 1.7.3
Latest release: about 2 years ago - 27 downloads - 2,178 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 1.7.3
Latest release: over 1 year ago - 58 downloads - 1,356 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 1.7.3
Latest release: about 2 years ago - 53 downloads - 469 dependencies
adfncgr/mpr-genotyping latest

  • version: 1.7.3
Latest release: over 2 years ago - 25 downloads - 437 dependencies
hieutran2907/ichorcna_samtools v1

  • version: 1.6.6
Latest release: over 2 years ago - 15 downloads - 363 dependencies
bianca7/clusterprofiler latest

  • version: 1.7.3
Latest release: about 2 years ago - 55 downloads - 1,315 dependencies
nahyunkong/sv-pipeline latest

  • version: 1.7.1
Latest release: over 2 years ago - 40 downloads - 1,083 dependencies
wangyanmin/fastseq-pipline latest

  • version: 1.3.2
Latest release: about 2 years ago - 56 downloads - 813 dependencies
fgualdr/env_motifs latest

  • version: 1.7.3
Latest release: about 2 years ago - 28 downloads - 544 dependencies
stevenpawley/rstats-ml latest

Image for general machine learning in R

  • version: 1.7.3
Latest release: almost 2 years ago - 63 downloads - 1,437 dependencies
pecan/depends 4.0.2

Image that contains all the required external packages needed for PEcAn.

  • version: 1.7.1, 1.7.3
Latest release: over 4 years ago - 85,775 downloads - 1,274 dependencies
bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

  • version: 1.7.3
Latest release: 5 months ago - 48,646 downloads - 1,551 dependencies
zhiliz/debian12-tools 0.1.0

  • version: 1.7.3
Latest release: about 2 years ago - 4,837 downloads - 520 dependencies