Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : methods

Explore the latest package usage data for methods in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 3,171
Total downloads: 264,444,891

More details on packages.ecosyste.ms - JSON

ebsproject/ba-worker 23.06.30.184-DEV

  • version: 4.3.1
Latest release: over 1 year ago - 9,181 downloads - 558 dependencies
nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 3.6.3
Latest release: over 3 years ago - 7,707 downloads - 423 dependencies
hpccbuilds/smoketest-platform-build-base 8.6

  • version: 3.6.3
Latest release: about 3 years ago - 6,394 downloads - 906 dependencies
lzydock/lzy-server optimize-tests-time-1.0

  • version: 4.0.3
Latest release: about 2 years ago - 6,123 downloads - 594 dependencies
biocontainers/oncocnv v7.0_cv2

  • version: 3.6.3
Latest release: about 2 years ago - 12,111 downloads - 307 dependencies
hpccbuilds/smoketest-platform-build-vcpkg candidate-8.12.x-164df4f5d1cd71ca32be2fb79a2c36cde9fa9308

  • version: 4.1.2
Latest release: 11 months ago - 11,514 downloads - 2,085 dependencies
intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

  • version: 3.6.2
Latest release: almost 2 years ago - 5,097 downloads - 1,140 dependencies
databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

  • version: 4.2.1
Latest release: over 1 year ago - 4,920 downloads - 656 dependencies
nfcore/proteomicslfq dev

A Docker Container for label free quantification for proteomics data.

  • version: 4.0.5
Latest release: over 2 years ago - 5,384 downloads - 1,124 dependencies
nfcore/clipseq dev

  • version: 3.2.2
Latest release: over 3 years ago - 5,470 downloads - 199 dependencies
nfcore/diaproteomics dev

A Docker container for nf-core/diaproteomics

  • version: 4.0.2
Latest release: over 3 years ago - 5,499 downloads - 488 dependencies
intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

  • version: 3.2.5
Latest release: over 4 years ago - 4,290 downloads - 842 dependencies
lzydock/lzy-whiteboard optimize-tests-time-1.0

  • version: 4.0.3
Latest release: about 2 years ago - 4,087 downloads - 498 dependencies
intelliseqngs/gatk-4.1.6.0 2.0.2

  • version: 3.2.5
Latest release: over 4 years ago - 3,337 downloads - 842 dependencies
qcdis/n-a-a-vre v2.2.7-beta

  • version: 4.1.2, 4.3.2, 4.3.1
Latest release: 11 months ago - 4,373 downloads - 2,624 dependencies
intelliseqngs/task_mt-varcall-mutect2 1.1.2

  • version: 3.6.2
Latest release: almost 2 years ago - 2,784 downloads - 1,038 dependencies
intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

  • version: 3.6.2
Latest release: almost 2 years ago - 2,314 downloads - 1,040 dependencies
intelliseqngs/gatk-4.2.0.0 1.0.0

  • version: 3.6.2
Latest release: over 3 years ago - 2,311 downloads - 957 dependencies
intelliseqngs/task_vcf-concat 1.0.4

  • version: 3.6.2
Latest release: over 1 year ago - 2,566 downloads - 1,043 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.0.0

  • version: 3.6.2
Latest release: about 1 year ago - 2,498 downloads - 346 dependencies
qcdis/n-a-a-vre-multiply v2.0-beta

  • version: 4.2.2
Latest release: over 1 year ago - 4,080 downloads - 2,511 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 3.6.3
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
qcdis/n-a-a-vre-laserfarm v2.2.7-beta

  • version: 4.2.2
Latest release: 11 months ago - 3,953 downloads - 2,599 dependencies
intelliseqngs/task_mt-realign 1.1.2

  • version: 3.6.2
Latest release: almost 2 years ago - 2,028 downloads - 1,038 dependencies
intelliseqngs/task_bam-gatk-m2 1.1.2

  • version: 3.6.2
Latest release: almost 2 years ago - 1,949 downloads - 1,038 dependencies
intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

  • version: 3.6.2
Latest release: almost 2 years ago - 1,947 downloads - 1,038 dependencies
intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

  • version: 3.6.2
Latest release: about 3 years ago - 1,698 downloads - 957 dependencies
nfcore/coproid 1.1.1

A Docker image for the nf-core/coproid pipeline.

  • version: 4.1.1
Latest release: about 2 years ago - 1,859 downloads - 194 dependencies
prismcmap/landing v0.2.2

  • version: 4.3.0
Latest release: over 1 year ago - 1,316 downloads - 877 dependencies
jelaniwoods/appdev2021-base-rails-hotfix latest

  • version: 3.6.3
Latest release: almost 3 years ago - 1,040 downloads - 1,846 dependencies
intelliseqngs/task_vcf-qc 1.4.0

  • version: 3.6.3
Latest release: about 2 years ago - 1,408 downloads - 604 dependencies
hoonbiolab/cellranger v1.0

  • version: 3.6.1
Latest release: almost 3 years ago - 919 downloads - 682 dependencies
jelaniwoods/appdev2021-base-rails latest

  • version: 3.6.3
Latest release: almost 3 years ago - 871 downloads - 1,846 dependencies
intelliseqngs/task_vcf-prepare 1.0.3

  • version: 3.6.2
Latest release: almost 2 years ago - 914 downloads - 1,038 dependencies
dg520/rsimple 1.1

  • version: 4.2.2
Latest release: almost 2 years ago - 777 downloads - 403 dependencies
nfcore/mnaseseq latest

A Docker container for the nf-core/mnaseseq pipeline.

  • version: 3.5.1
Latest release: over 2 years ago - 1,092 downloads - 212 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 3.5.2
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
lucifer001/custom-rs-tf-multiuser gpu

  • version: 3.6.3
Latest release: almost 4 years ago - 949 downloads - 807 dependencies
gesiscss/binder-mkozturk-2dcmpe140-fa0cda f6261af265af3e5c388be9ba9969a5e640fe2e16

  • version: 3.6.3
Latest release: over 3 years ago - 759 downloads - 1,922 dependencies
ocdr/ds-apps test2

  • version: 4.3.1, 4.3.2
Latest release: 12 months ago - 3,555 downloads - 3,778 dependencies
alexwaldrop/metaxcan 75065864afcec43181f17ef00c8518a2d29fe8a7

Metaxcan v.0.6.6 integrative gene mapping software

  • version: 3.5.1
Latest release: almost 6 years ago - 731 downloads - 510 dependencies
veitveit/isolabeledprotocol latest

Discontinued, see github.com/ProtProtocols/IsoProt for updates

  • version: 3.4.4
Latest release: about 6 years ago - 715 downloads - 2,000 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 4.0.2
Latest release: 12 months ago - 1,452 downloads - 633 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 3.5.1
Latest release: almost 6 years ago - 702 downloads - 606 dependencies
nuest/rocker-versioned 3.4.1

r-ver test with semver build tags

  • version: 3.4.1
Latest release: about 5 years ago - 700 downloads - 264 dependencies
nfcore/exoseq dev

A docker container for the ExoSeq pipeline

  • version: 3.5.1
Latest release: about 6 years ago - 1,158 downloads - 616 dependencies
singnet/moses latest

  • version: 3.6.3
Latest release: almost 2 years ago - 693 downloads - 680 dependencies
tercen/runtime-r35 3.5.3-7

  • version: 3.5.3
Latest release: over 2 years ago - 700 downloads - 563 dependencies
davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

  • version: 3.6.3
Latest release: about 4 years ago - 680 downloads - 2,114 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 3.5.1
Latest release: almost 6 years ago - 1,141 downloads - 413 dependencies
gesiscss/singleuser-orc r2d-49e91d9

  • version: 3.5.1, 3.4.4
Latest release: almost 5 years ago - 660 downloads - 1,900 dependencies
hpccbuilds/build-ubuntu-22.04 community_8.12.0-rc4

  • version: 4.1.2
Latest release: almost 2 years ago - 651 downloads - 664 dependencies
intelliseqngs/gatk-4.1.7.0-grch38-no-alt 1.0.1

  • version: 3.2.5
Latest release: over 4 years ago - 640 downloads - 842 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 4.0.3
Latest release: over 2 years ago - 635 downloads - 1,650 dependencies
ctomlins/mblast latest

  • version: 4.2.0
Latest release: about 2 years ago - 631 downloads - 399 dependencies
gesiscss/binder-matjesg-2dais-5f2019-df9f9f c588d97bc20b1345ea549a5260d2ec36137e911b

  • version: 3.6.2
Latest release: almost 5 years ago - 630 downloads - 2,075 dependencies
seglh/exomedepth f4716ad

  • version: 4.2.1
Latest release: 12 months ago - 928 downloads - 548 dependencies
rocker/r-edge latest

R support for bleeding-edge compilers

  • version: 4.1.2
Latest release: over 2 years ago - 629 downloads - 359 dependencies
intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

  • version: 3.6.2
Latest release: almost 3 years ago - 614 downloads - 946 dependencies
beakernotebook/beaker-base latest

Base image for building beaker docker image

  • version: 3.3.2
Latest release: about 8 years ago - 593 downloads - 1,825 dependencies
afcai2c/r-studio rebuild

Basic installation of R Studio.

  • version: 4.2.2
Latest release: almost 2 years ago - 594 downloads - 740 dependencies
rocker/drp latest

R-patched

  • version: 4.3.2
Latest release: about 2 years ago - 706 downloads - 435 dependencies
hpccbuilds/build-centos-7 community_8.12.0-rc4

  • version: 3.6.0
Latest release: almost 2 years ago - 758 downloads - 953 dependencies
gene110/nipt_report latest

  • version: 3.4.4
Latest release: over 3 years ago - 785 downloads - 676 dependencies
dragonflyscience/shellington 2021-09-14

  • version: 4.1.0
Latest release: about 3 years ago - 664 downloads - 1,446 dependencies
qcdis/python-vol2birds v2.1

  • version: 4.3.1
Latest release: about 1 year ago - 1,558 downloads - 259 dependencies
gesiscss/binder-numeconcopenhagen-2dlectures-2d2020-a504cd 3037261943dce17c68a5d932223d3724580e1671

  • version: 3.5.1
Latest release: over 3 years ago - 555 downloads - 3,922 dependencies
nextgenusfs/funannotate-slim v1.8.15

Base funannotate image (no databases)

  • version: 3.6.3
Latest release: over 1 year ago - 630 downloads - 261 dependencies
ashish1981/z-reference-implementation latest

  • version: 3.6.0
Latest release: over 3 years ago - 572 downloads - 2,108 dependencies
rhub/centos-epel latest

  • version: 4.1.2
Latest release: almost 3 years ago - 533 downloads - 843 dependencies
dragonflyscience/wfm-reports-20.04 2022-10-14

  • version: 4.1.0
Latest release: about 2 years ago - 925 downloads - 2,312 dependencies
qcdis/n-a-a-vre-pytorch v2.0-beta

  • version: 4.2.2
Latest release: over 1 year ago - 1,462 downloads - 2,830 dependencies
nfcore/ddamsproteomics dev

A Docker image for the nf-core/ddamsproteomics pipeline.

  • version: 3.4.1
Latest release: almost 6 years ago - 959 downloads - 306 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 3.0.2
Latest release: about 8 years ago - 510 downloads - 3,106 dependencies
hpccbuilds/build-centos-8 community_8.12.0-rc4

  • version: 4.2.2
Latest release: almost 2 years ago - 502 downloads - 1,138 dependencies
nfcore/denovohybrid dev

A Docker Image for the nf-core/denovohybrid pipeline

  • version: 3.5.1
Latest release: over 5 years ago - 942 downloads - 374 dependencies
afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

  • version: 4.1.3
Latest release: about 2 years ago - 492 downloads - 1,748 dependencies
hpccbuilds/build-ubuntu-18.04 community_8.12.0-rc4

  • version: 3.4.4
Latest release: almost 2 years ago - 678 downloads - 5,787 dependencies
tercen/tercen_studio 4.0.4-1

  • version: 4.0.4
Latest release: about 2 years ago - 490 downloads - 637 dependencies
kbase/sdkbase latest

  • version: 3.0.2
Latest release: almost 8 years ago - 476 downloads - 2,934 dependencies
gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52

  • version: 3.6.2
Latest release: almost 5 years ago - 470 downloads - 2,089 dependencies
rapporteket/base-r 4.2.2

  • version: 4.2.2
Latest release: almost 2 years ago - 1,666 downloads - 509 dependencies
rocker/gdal latest

Build gdal separately to avoid timeouts

  • version: 4.0.0
Latest release: about 5 years ago - 520 downloads - 748 dependencies
gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

  • version: 4.1.0
Latest release: over 3 years ago - 452 downloads - 2,029 dependencies
biocontainers/danpos v2.2.2_cv3

  • version: 3.2.3
Latest release: over 5 years ago - 742 downloads - 456 dependencies
anzaika/selectoscope_base latest

Base image with all pipeline parts for selectoscope.

  • version: 3.3.2
Latest release: almost 8 years ago - 441 downloads - 1,116 dependencies
prismcmap/drc-module robust_DRC

  • version: 4.0.2
Latest release: over 1 year ago - 539 downloads - 647 dependencies
ferlabcrsj/all-spark-notebook 3.2.0

Spark notebook images

  • version: 4.1.2
Latest release: over 2 years ago - 444 downloads - 2,752 dependencies
databrewllc/data-anonymization production

  • version: 4.2.1
Latest release: almost 2 years ago - 3,095 downloads - 651 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 4.2.2
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
dhspence/docker-sicer latest

  • version: 3.4.1, 3.5.0
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
evolbioinfo/table2itol fa4b43c

The table2itol.R script makes it easy to generate iTOL annotations from spreadsheet files.

  • version: 4.0.2
Latest release: over 2 years ago - 475 downloads - 348 dependencies