cjagla/seurat_shiny latest

jmonlong/terra-rstudio-custom 0.0.1

shl198/rna_ppl latest

bicore/gcs_10x_rnaseq_qc 4.2.0

ucigenomics/spatiallibd latest

compbiocore/jupyterhub-docker-images-jh_image 20230524

wlc27/dcanr v1

chiajungl/seurat 4.4.0-4.4

alexthiery/r_sqldf 0.2

mitpenguin/analysis dev-20230524

chiajungl/verse-seurat 4.0.2-4.3

yaobio/archr-4g 1.0.2

Docker images for ArchR (Analysis of Regulatory Chromatin in R)

archang/seurat-zellk latest

winuthayanon/seurat 4.3.0

archang/stdeconvolve latest

lucifer001/default-dev-backup-test 04-26-23-12-15-34

matzieb/shiny-4.0.3-seurat4-spatial latest

brianyee/cropseq-essentials 1.0.0

nilesh0404/st_visualizer m1_0.1.2

apoorvababu/scviewerlite latest

Light version of SeuratViewer, an R Shiny website for viewing single cell RNA-Seq data

cwong23/stx_env latest

Environment for spatial pipeline

tomasgomes/nextflow_kallisto_sc 0.3

bbeacosta/sctype latest

buddej/scshc 0.1.0

alexdaiii/seurat_tutorial 1.0.1

todzhu/monocle latest

xiaozhou822/shiny 4.2.2

Rshiny版本的绘图包

kuangda/pc12 latest

bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

abelean/seurat_desctools 4.1.0

bigomics/omicsplayground-base ub2204_v4

johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

mparikhbroad/mast_workflow 1.0.2

jesusgf23/allenseurat latest

chiajungl/smk-scrna-extra 4.3-7.30-4.3

ocdr/dcv 1.0.10

cmccornack/crmsc latest

jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

mshriver01/share_task_seurat latest

alexthiery/schelper seurat-schelper-0.3.5

chiajungl/scrna-extra 4.4.0-4.4

qdidiscoveryservices/sclite_generate_clean_osprj v1.2

njjai/scrattch_mapping 1.1.0

tariship/dev_sync_directories latest

nathanprovin/cellcom 1.2.2

rgregstacey/seurat_image 2.1

jafoltz/sc_python 8

stefanucciluca/tregopathies latest

etycksen/sc_deluxe 0.6

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

gyusikhwang/tgs v1

granatumx/gbox-cellid-sctype 1.0.2

mshriver01/share_task_archr latest

mknudson/share_task_cell_annotation mei-cell-annotation

mikesiwenwu/eversus_benchmarking v7_s3test

brusconi/seurat new

nfancy/scflow 0.7.4

alexthiery/archr_seurat_signac_mega 3.2

andrewsg/archr dev

wyangwu/r4.1.2 latest

bioxfu/xseurat2 latest

robertplayer/scidap-genelists v5.0.0

varemo/sam23 latest

chunjiesamliu/scmocha latest

dpraveen511/spot spot_ec2

yosuketanigawa/rstudio_yt latest

chiajungl/scrna 4.4.0-4.4

jingxin/terrascpipe v0

viascientific/rstudio-app-isee 1.0

jackiezhuqi/bio-rstudio latest

dantingz/seurat 1.0.2

winuthayanon/rstudio 4.3.0

abelhj/rstudio 4.2.3

btrspg/vscode-dkd-env latest

imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

gaspardr/r-env test

My R environment for analyses and development

ycli1995/bioinfo_dev 1.1.0

arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

dnbelabc4/dnbc4dev 2.1.2

dongminshin/sc_ppl 1.71

sheddn/singlecell latest

atttilacs/ds_seurat_5_extras_hdf5r latest

gesiscss/binder-r2d-g5b5b759-keon-2darbabi-2dkcni-2dsummer-2dschool-2dday-2d3-e4e96e fad4fccb2e0c5030283f1b4e665b22eafa490b69

etretiakov/rocker-session latest

vidhyagnanasekaran/rocker-single-cell v1

igrisch/seuratharmony latest

ksinghal28/generate_pon 1.0

pl92297/sceqtl latest

alexthiery/archr_macs2_seurat 3.0

avi156/rocker-binder-upd 4.2.2

uvarc/rstudio tam5xe

natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

luslab/archr_dev latest

cplaisier/ccafv2_extra latest