Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : knitr

Explore the latest package usage data for knitr in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,998
Total downloads: 176,612,668

More details on packages.ecosyste.ms - JSON

dragonflyscience/niwaverse 2020-08-11

  • version: 1.28
Latest release: over 4 years ago - 1,787 downloads - 1,445 dependencies
ccdlstaging/dr_compendia 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.29
Latest release: 12 months ago - 2,332 downloads - 877 dependencies
rapporteket/dev main

  • version: 1.44
Latest release: almost 2 years ago - 1,958 downloads - 1,346 dependencies
rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

  • version: 1.26
Latest release: almost 5 years ago - 1,775 downloads - 581 dependencies
tercen/dartrusttidy travis-17

  • version: 1.31
Latest release: over 3 years ago - 1,434 downloads - 700 dependencies
openanalytics/r-shiny-rdkit 4.1.2-2022.03.1

  • version: 1.38
Latest release: over 2 years ago - 1,389 downloads - 1,216 dependencies
gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

  • version: 1.28
Latest release: over 3 years ago - 1,335 downloads - 1,885 dependencies
gesiscss/binder-palmoreck-2ddockerfiles-2dfor-2dbinder-f98a72 e6751152f3669d7fa6b0892ed229918a75b153df

  • version: 1.33
Latest release: about 3 years ago - 1,231 downloads - 2,152 dependencies
dceoy/r-tidyverse latest

R with tidyverse

  • version: 1.41
Latest release: almost 2 years ago - 1,242 downloads - 615 dependencies
dragonflyscience/dragonverse-18.04 latest

  • version: 1.33
Latest release: over 2 years ago - 1,227 downloads - 1,440 dependencies
afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

  • version: 1.39
Latest release: almost 2 years ago - 1,131 downloads - 702 dependencies
kbase/narrprereq 1.3

Narrative prerequisite base image (used by kbase/narrabase).

  • version: 1.18
Latest release: almost 7 years ago - 1,055 downloads - 1,383 dependencies
kbase/metrics latest

  • version: 1.22
Latest release: over 3 years ago - 1,027 downloads - 973 dependencies
ocdr/dkube-datascience-rs-tf-gpu v2.0.0-tiji-test

  • version: 1.28
Latest release: over 2 years ago - 1,025 downloads - 1,011 dependencies
nfcore/airrflowreport dev

  • version: 1.42
Latest release: over 1 year ago - 994 downloads - 409 dependencies
dragonflyscience/sharknado 2023-07-23

  • version: 1.39
Latest release: over 1 year ago - 1,298 downloads - 2,516 dependencies
recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

  • version: 1.31
Latest release: over 3 years ago - 977 downloads - 524 dependencies
biocontainers/ipo develop

A Tool for automated Optimization of XCMS Parameters

  • version: 1.20
Latest release: over 6 years ago - 957 downloads - 366 dependencies
kbase/errorlogging develop

  • version: 1.22
Latest release: almost 4 years ago - 948 downloads - 973 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.33
Latest release: about 2 years ago - 1,202 downloads - 654 dependencies
biocontainers/phylotools v0.2.4_cv1

  • version: 1.37
Latest release: almost 3 years ago - 889 downloads - 520 dependencies
afcai2c/python-r-ai latest

Image with Python and R packages

  • version: 1.39
Latest release: over 2 years ago - 851 downloads - 851 dependencies
gesiscss/binder-lmartinoty-2dlmartinoty-e3b0bd c626ad4bba1c566a8af5d745f4386d02e9fe9b44

  • version: 1.23
Latest release: almost 4 years ago - 829 downloads - 2,085 dependencies
tercen/runtime-r40 4.0.4-6

  • version: 1.31
Latest release: almost 2 years ago - 877 downloads - 639 dependencies
oxsecurity/megalinter v7.7.0

  • version: 1.43
Latest release: 12 months ago - 690,473 downloads - 5,467 dependencies
sourcegraph/codeintel-r insiders

  • version: 1.20
Latest release: about 6 years ago - 64,477 downloads - 352 dependencies
nfcore/slamseq dev

A docker image for nf-core/slamseq

  • version: 1.28
Latest release: over 3 years ago - 25,614 downloads - 354 dependencies
prismcmap/reports 94804f34cf31

  • version: 1.45, 1.43
Latest release: 12 months ago - 16,420 downloads - 1,108 dependencies
nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 1.31
Latest release: over 3 years ago - 7,707 downloads - 423 dependencies
databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

  • version: 1.40
Latest release: over 1 year ago - 4,920 downloads - 656 dependencies
nfcore/proteomicslfq dev

A Docker Container for label free quantification for proteomics data.

  • version: 1.37
Latest release: over 2 years ago - 5,384 downloads - 1,124 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.28
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
prismcmap/landing v0.2.2

  • version: 1.42
Latest release: over 1 year ago - 1,316 downloads - 877 dependencies
intelliseqngs/task_vcf-qc 1.4.0

  • version: 1.39
Latest release: about 2 years ago - 1,408 downloads - 604 dependencies
hoonbiolab/cellranger v1.0

  • version: 1.33
Latest release: almost 3 years ago - 919 downloads - 682 dependencies
dg520/rsimple 1.1

  • version: 1.41
Latest release: almost 2 years ago - 777 downloads - 403 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.21
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
lucifer001/custom-rs-tf-multiuser gpu

  • version: 1.28
Latest release: almost 4 years ago - 949 downloads - 807 dependencies
ocdr/ds-apps test2

  • version: 1.44, 1.45
Latest release: 12 months ago - 3,555 downloads - 3,778 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 1.37
Latest release: 12 months ago - 1,452 downloads - 633 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 1.20
Latest release: almost 6 years ago - 702 downloads - 606 dependencies
tercen/runtime-r35 3.5.3-7

  • version: 1.22
Latest release: over 2 years ago - 700 downloads - 563 dependencies
davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

  • version: 1.30
Latest release: about 4 years ago - 680 downloads - 2,114 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 1.20
Latest release: almost 6 years ago - 1,141 downloads - 413 dependencies
gesiscss/singleuser-orc r2d-49e91d9

  • version: 1.28
Latest release: almost 5 years ago - 660 downloads - 1,900 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 1.37
Latest release: over 2 years ago - 635 downloads - 1,650 dependencies
ctomlins/mblast latest

  • version: 1.39
Latest release: about 2 years ago - 631 downloads - 399 dependencies
gesiscss/binder-matjesg-2dais-5f2019-df9f9f c588d97bc20b1345ea549a5260d2ec36137e911b

  • version: 1.22
Latest release: almost 5 years ago - 630 downloads - 2,075 dependencies
seglh/exomedepth f4716ad

  • version: 1.45, 1.43
Latest release: 12 months ago - 928 downloads - 548 dependencies
afcai2c/r-studio rebuild

Basic installation of R Studio.

  • version: 1.40
Latest release: almost 2 years ago - 594 downloads - 740 dependencies
gene110/nipt_report latest

  • version: 1.30
Latest release: over 3 years ago - 785 downloads - 676 dependencies
dragonflyscience/shellington 2021-09-14

  • version: 1.33
Latest release: about 3 years ago - 664 downloads - 1,446 dependencies
gesiscss/binder-numeconcopenhagen-2dlectures-2d2020-a504cd 3037261943dce17c68a5d932223d3724580e1671

  • version: 1.22
Latest release: over 3 years ago - 555 downloads - 3,922 dependencies
ashish1981/z-reference-implementation latest

  • version: 1.33
Latest release: over 3 years ago - 572 downloads - 2,108 dependencies
dragonflyscience/wfm-reports-20.04 2022-10-14

  • version: 1.36
Latest release: about 2 years ago - 925 downloads - 2,312 dependencies
nfcore/ddamsproteomics dev

A Docker image for the nf-core/ddamsproteomics pipeline.

  • version: 1.20
Latest release: almost 6 years ago - 959 downloads - 306 dependencies
afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

  • version: 1.39
Latest release: about 2 years ago - 492 downloads - 1,748 dependencies
tercen/tercen_studio 4.0.4-1

  • version: 1.31
Latest release: about 2 years ago - 490 downloads - 637 dependencies
gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52

  • version: 1.26
Latest release: almost 5 years ago - 470 downloads - 2,089 dependencies
rapporteket/base-r 4.2.2

  • version: 1.41
Latest release: almost 2 years ago - 1,666 downloads - 509 dependencies
rocker/gdal latest

Build gdal separately to avoid timeouts

  • version: 1.25
Latest release: about 5 years ago - 520 downloads - 748 dependencies
gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

  • version: 1.30
Latest release: over 3 years ago - 452 downloads - 2,029 dependencies
prismcmap/drc-module robust_DRC

  • version: 1.37
Latest release: over 1 year ago - 539 downloads - 647 dependencies
ferlabcrsj/all-spark-notebook 3.2.0

Spark notebook images

  • version: 1.39
Latest release: over 2 years ago - 444 downloads - 2,752 dependencies
databrewllc/data-anonymization production

  • version: 1.40
Latest release: almost 2 years ago - 3,095 downloads - 651 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 1.42
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
dhspence/docker-sicer latest

  • version: 1.20
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
fazenda/r-testing latest

ESTATCAMP's R testing environment.

  • version: 1.20
Latest release: almost 6 years ago - 416 downloads - 680 dependencies
focaloiddev/shiny latest.slimxx

  • version: 1.42
Latest release: over 1 year ago - 748 downloads - 88 dependencies
qdidiscoveryservices/limma-voom 4.2.0

  • version: 1.39
Latest release: over 2 years ago - 1,002 downloads - 1,382 dependencies
phidata/jupyterlab 3.5.2

  • version: 1.41
Latest release: almost 2 years ago - 431 downloads - 2,228 dependencies
openmicroscopy/training-notebooks 0.7

A set of Notebooks to demonstrate how to access the images and metadata from OMERO

  • version: 1.27
Latest release: almost 5 years ago - 409 downloads - 2,707 dependencies
tercen/operator_base 1.0.5

  • version: 1.15.1
Latest release: almost 6 years ago - 393 downloads - 699 dependencies
recetox/aplcms latest

  • version: 1.28
Latest release: over 3 years ago - 386 downloads - 458 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.42
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
prismcmap/norm-module 26be7aa8ab48

  • version: 1.37
Latest release: almost 2 years ago - 380 downloads - 633 dependencies
dragonflyscience/dragonforest-20.04 20220711_1155

  • version: 1.39
Latest release: over 2 years ago - 386 downloads - 2,553 dependencies
nuest/ten-simple-rules-dockerfiles latest

  • version: 1.28
Latest release: about 4 years ago - 361 downloads - 752 dependencies
cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

  • version: 1.39
Latest release: over 2 years ago - 363 downloads - 1,581 dependencies
kraigerl95/jupyternotebook-r stable

Jupyter Notebook wiht personal changes

  • version: 1.44
Latest release: almost 2 years ago - 703 downloads - 1,903 dependencies
gesiscss/binder-arnim-2drstan-2dbinder-55f747 090d5b5cb3a32d8b6f3ff1a32478165045a813e2

  • version: 1.26
Latest release: almost 5 years ago - 351 downloads - 2,030 dependencies
almahmoud/bioconductor_docker RELEASE_3_17

  • version: 1.42
Latest release: over 1 year ago - 359 downloads - 1,206 dependencies
rprotobuf/ci latest

Continued Integration of RProtoBuf

  • version: 1.42
Latest release: almost 2 years ago - 349 downloads - 463 dependencies
vanallenlab/sv-pipeline-qc gnomad_v3_qc

  • version: 1.36
Latest release: almost 2 years ago - 338 downloads - 1,373 dependencies
gesiscss/binder-bollwyvl-2djupyterlab-2dlsp-902099 53686d0e9aaaba4590911e5cc745f7e933bcca08

  • version: 1.31
Latest release: almost 4 years ago - 334 downloads - 3,749 dependencies
gesiscss/binder-jupyterlab-2djupyterlab-2ddemo-b2f8d0 5a5eb6bb04250b199a1cbb529e744075216a17a5

  • version: 1.31
Latest release: over 3 years ago - 321 downloads - 2,083 dependencies
datalabauth/covid19 latest

Webapp for visualizing COVID-19 data

  • version: 1.30
Latest release: about 2 years ago - 320 downloads - 576 dependencies
dhspence/docker-basestation latest

  • version: 1.20
Latest release: over 5 years ago - 308 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.28
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
inseefrlab/onyxia-sparkr r4.3.2-spark3.5.0-2024.01.15

A minimal R environment configured to use Spark through the SparkR package.

  • version: 1.43, 1.45
Latest release: 10 months ago - 1,249 downloads - 2,922 dependencies
openanalytics/shinyproxy-juypter-datascience latest

  • version: 1.33
Latest release: over 2 years ago - 463 downloads - 1,685 dependencies
ocdr/dkube-datascience-rs-sk-cpu test-py

  • version: 1.26
Latest release: about 4 years ago - 299 downloads - 714 dependencies
nuest/rockerverse-paper latest

  • version: 1.27
Latest release: about 4 years ago - 286 downloads - 1,133 dependencies