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Package Usage : cran : genefilter

Explore the latest package usage data for genefilter in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 222
Total downloads: 530,663

More details on packages.ecosyste.ms - JSON

markataylor/r_yufree v1.0.0

  • version: 1.80.0
Latest release: over 2 years ago - 27 downloads - 1,514 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 1.68.0
Latest release: almost 5 years ago - 10 downloads - 431 dependencies
bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

  • version: 1.72.1
Latest release: 12 months ago - 39 downloads - 421 dependencies
edkang0925/diffutr latest

  • version: 1.80.3
Latest release: over 2 years ago - 44 downloads - 532 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.82.1, 1.80.3
Latest release: over 1 year ago - 110 downloads - 1,150 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 1.80.0
Latest release: over 2 years ago - 20 downloads - 598 dependencies
philipp02/pathway v1

  • version: 1.81.0
Latest release: over 2 years ago - 25 downloads - 345 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.82.1
Latest release: about 2 years ago - 20 downloads - 352 dependencies
am5747/methylation latest

  • version: 1.80.3
Latest release: over 2 years ago - 30 downloads - 290 dependencies
weishwu/planet 12052022

  • version: 1.78.0
Latest release: over 2 years ago - 29 downloads - 341 dependencies
qdidiscoveryservices/pseudobulk 2.0.2

  • version: 1.72.0
Latest release: 11 months ago - 586 downloads - 1,112 dependencies
tamaraperteghella/r4_hormonit latest

  • version: 1.76.0
Latest release: about 2 years ago - 26 downloads - 1,528 dependencies
msgao/deseq2 latest

  • version: 1.76.0
Latest release: over 2 years ago - 21 downloads - 384 dependencies
almahmoud/terra-jupyter bioc

  • version: 1.78.0
Latest release: over 2 years ago - 62 downloads - 2,217 dependencies
vegesnam/metaboanalyst 6thnov2024

  • version: 1.80.3
Latest release: 9 months ago - 190 downloads - 358 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 1.72.1
Latest release: over 2 years ago - 44 downloads - 406 dependencies
bixbeta/cluster_profiler v1

  • version: 1.72.1
Latest release: over 2 years ago - 17 downloads - 1,038 dependencies
jieliu4wustl/wustl hisat3n

  • version: 1.68.0
Latest release: over 1 year ago - 5,656 downloads - 1,124 dependencies
chaunceyzhou/awesome_rnaseq v2.0

  • version: 1.68.0
Latest release: over 1 year ago - 83 downloads - 465 dependencies
peeyushweav/weav_c5_flask v1.0.22

  • version: 1.82.1
Latest release: almost 2 years ago - 3,030 downloads - 467 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 1.78.0
Latest release: over 2 years ago - 63 downloads - 953 dependencies
andyvs/testimage 3.0

  • version: 1.80.0
Latest release: over 2 years ago - 40 downloads - 376 dependencies
viascientific/deseq2-docker 2.0

  • version: 1.80.0, 1.80.3
Latest release: over 2 years ago - 111 downloads - 375 dependencies
apollodorus/genentech-jp v1

  • version: 1.76.0
Latest release: over 2 years ago - 45 downloads - 1,947 dependencies
mhettich0years/r-images v1.1.2

  • version: 1.80.2
Latest release: over 2 years ago - 77 downloads - 334 dependencies
bixbeta/pavian v1

  • version: 1.72.1
Latest release: over 2 years ago - 14 downloads - 388 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 1.68.0
Latest release: over 5 years ago - 13 downloads - 2,128 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.78.0
Latest release: over 2 years ago - 120 downloads - 512 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.80.3
Latest release: almost 2 years ago - 52 downloads - 1,562 dependencies
srynobio/diagnostic_rnaseq latest

  • version: 1.82.1
Latest release: over 2 years ago - 168 downloads - 1,441 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.80.2
Latest release: over 2 years ago - 25 downloads - 1,604 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 1.76.0
Latest release: over 2 years ago - 9 downloads - 1,347 dependencies
ntobias85/abe_repo rbuild_reports_1.0.1

  • version: 1.66.0
Latest release: about 1 year ago - 60 downloads - 1,339 dependencies
madhu99/sb6 latest

  • version: 1.80.1
Latest release: over 2 years ago - 11 downloads - 666 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.76.0
Latest release: about 2 years ago - 56 downloads - 2,387 dependencies
shl198/rna_ppl latest

  • version: 1.78.0
Latest release: over 2 years ago - 23 downloads - 2,099 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.80.3
Latest release: about 2 years ago - 40 downloads - 1,720 dependencies
bicore/gcs_10x_rnaseq_qc 4.2.0

  • version: 1.78.0
Latest release: over 2 years ago - 28 downloads - 1,454 dependencies
mfsentma/rna latest

  • version: 1.76.0
Latest release: over 2 years ago - 12 downloads - 807 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 1.80.0
Latest release: about 2 years ago - 32 downloads - 1,319 dependencies
weishwu/diffbind 3.6.5

  • version: 1.78.0
Latest release: over 2 years ago - 27 downloads - 1,507 dependencies
wlc27/dcanr v1

  • version: 1.80.2
Latest release: over 2 years ago - 63 downloads - 1,681 dependencies
fgualdr/env_perm_motifs latest

  • version: 1.80.0
Latest release: about 2 years ago - 31 downloads - 584 dependencies
ericsalomaki/mirna 071723

  • version: 1.76.0
Latest release: about 2 years ago - 24 downloads - 1,834 dependencies
hbadrane/fungap version3

  • version: 1.68.0
Latest release: almost 2 years ago - 97 downloads - 479 dependencies
tamaraperteghella/r4_gencode latest

  • version: 1.76.0
Latest release: about 2 years ago - 20 downloads - 1,460 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.72.1
Latest release: about 2 years ago - 19 downloads - 1,061 dependencies
chlazaris/dge_env 0.1

  • version: 1.76.0
Latest release: about 2 years ago - 16 downloads - 320 dependencies
rayne233/lcms latest

  • version: 1.76.0
Latest release: about 2 years ago - 82 downloads - 658 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.82.1
Latest release: over 1 year ago - 74 downloads - 1,224 dependencies
phenomedb/phenomedb-api-npc latest

  • version: 1.80.3
Latest release: over 2 years ago - 29 downloads - 1,310 dependencies
hwt940810/wentaohan_altanalyze_0.7 latest

  • version: 1.64.0
Latest release: about 2 years ago - 22 downloads - 801 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 1.80.0
Latest release: about 2 years ago - 53 downloads - 469 dependencies
adfncgr/mpr-genotyping latest

  • version: 1.82.1
Latest release: over 2 years ago - 25 downloads - 437 dependencies
trust1/jmml latest

JMML classifier

  • version: 1.76.0
Latest release: over 2 years ago - 30 downloads - 658 dependencies
skchronicles/flair v0.1.0

Docker image for FLAIR: Full-Length Alternative Isoform analysis of RNA

  • version: 1.76.0
Latest release: over 2 years ago - 317 downloads - 729 dependencies
fgualdr/env_motifs latest

  • version: 1.80.0
Latest release: about 2 years ago - 28 downloads - 544 dependencies
kuangda/pc12 latest

  • version: 1.78.0
Latest release: over 2 years ago - 36 downloads - 1,326 dependencies
bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

  • version: 1.76.0
Latest release: 5 months ago - 48,646 downloads - 1,551 dependencies
prismcmap/biomarker 4602f53feb5a

  • version: 1.72.1
Latest release: 5 months ago - 10,552 downloads - 633 dependencies
prismcmap/drc 2caf74498065

  • version: 1.72.1
Latest release: about 1 year ago - 6,008 downloads - 657 dependencies
abelean/seurat_desctools 4.1.0

  • version: 1.76.0
Latest release: over 2 years ago - 800 downloads - 1,090 dependencies
bigomics/omicsplayground-base ub2204_v4

  • version: 1.76.0
Latest release: about 1 year ago - 1,554 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 1.74.0
Latest release: almost 2 years ago - 507 downloads - 924 dependencies
datashield/rock-dolomite-xenon 2.1.1

This DataSHIELD profile consists of the platform 'dolomite' and the profile 'xenon'.

  • version: 1.82.1
Latest release: over 1 year ago - 1,528 downloads - 1,410 dependencies
alesmaver/scramble2 latest

  • version: 1.68.0
Latest release: about 2 years ago - 2,550 downloads - 1,116 dependencies
cmccornack/crmsc latest

  • version: 1.76.0
Latest release: about 2 years ago - 374 downloads - 1,476 dependencies
omicschef/rnaseqchef v1.1.4

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 1.82.1
Latest release: 7 months ago - 1,257 downloads - 1,420 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 1.72.1
Latest release: about 2 years ago - 269 downloads - 1,173 dependencies
cjchen/tbtoolszone 2.0

  • version: 1.76.0
Latest release: over 2 years ago - 139 downloads - 789 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.82.1
Latest release: about 2 years ago - 253 downloads - 1,223 dependencies
sgiamberardinorti/dge_analysis 202304171546_x86_64

202304171546 : Rv4.2.3 / argparse ________________ 202303100921 : Rv4.2.2 / no argparse

  • version: 1.80.0
Latest release: over 2 years ago - 147 downloads - 1,881 dependencies
cjchen/scauclass_2023 1.0

  • version: 1.82.1
Latest release: almost 2 years ago - 110 downloads - 393 dependencies
shengqh/cqs_smallrnaseq 20240201

  • version: 1.82.1
Latest release: over 1 year ago - 398 downloads - 1,416 dependencies
andimajore/unpast_eval_container_asthma latest

  • version: 1.60.0
Latest release: about 2 years ago - 120 downloads - 486 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.82.1
Latest release: about 2 years ago - 146 downloads - 679 dependencies
prismcmap/normalization EPS004

  • version: 1.72.1
Latest release: 6 months ago - 961 downloads - 245 dependencies
nciccbr/ccbr_fraser_1.10.2 latest

  • version: 1.72.1
Latest release: over 2 years ago - 74 downloads - 293 dependencies
jafoltz/sc_python 8

  • version: 1.76.0
Latest release: over 2 years ago - 104 downloads - 438 dependencies
prismcmap/qc EPS004

  • version: 1.72.1
Latest release: 6 months ago - 629 downloads - 245 dependencies
prismcmap/lfc 0.0.1

  • version: 1.72.1
Latest release: about 2 years ago - 684 downloads - 245 dependencies
prismcmap/batch_correction EPS004

  • version: 1.72.1
Latest release: 6 months ago - 628 downloads - 245 dependencies
gyusikhwang/tgs v1

  • version: 1.76.0
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
alexsickler/open-pedcan latest

  • version: 1.68.0
Latest release: over 2 years ago - 150 downloads - 864 dependencies
prismcmap/compound_summary EPS004

  • version: 1.72.1
Latest release: 6 months ago - 425 downloads - 245 dependencies
evafastpf/commot 0.1

  • version: 1.68.0
Latest release: about 2 years ago - 60 downloads - 1,877 dependencies
brusconi/seurat new

  • version: 1.82.1
Latest release: about 1 year ago - 124 downloads - 536 dependencies
omicschef/epigenomechef v1.1.5

  • version: 1.82.1
Latest release: over 1 year ago - 390 downloads - 1,066 dependencies
wyangwu/r4.1.2 latest

  • version: 1.76.0
Latest release: about 2 years ago - 93 downloads - 827 dependencies
robertplayer/scidap-genelists v5.0.0

  • version: 1.76.0
Latest release: 11 months ago - 374 downloads - 609 dependencies
andimajore/unpast_eval_container_bc latest

  • version: 1.60.0
Latest release: almost 2 years ago - 71 downloads - 486 dependencies