Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : beachmat

Explore the latest package usage data for beachmat in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 175
Total downloads: 164,525

More details on packages.ecosyste.ms - JSON

chiajungl/seurat 4.3.0-5.0

  • version: 2.16.0
Latest release: 10 months ago - 17 downloads - 1,249 dependencies
archang/seurat-zellk latest

  • version: 2.14.0
Latest release: over 1 year ago - 9 downloads - 935 dependencies
winuthayanon/seurat 4.3.0

  • version: 2.14.2
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 2.16.0
Latest release: about 1 year ago - 18 downloads - 1,422 dependencies
tercen/tercen-studio-flowsuite 3.15-6

  • version: 2.12.0
Latest release: over 1 year ago - 10 downloads - 1,885 dependencies
cwong23/stx_env latest

Environment for spatial pipeline

  • version: 2.14.2
Latest release: over 1 year ago - 9 downloads - 1,606 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 2.16.0
Latest release: 8 months ago - 51 downloads - 1,224 dependencies
tomasgomes/nextflow_kallisto_sc 0.3

  • version: 2.10.0
Latest release: 11 months ago - 39 downloads - 1,194 dependencies
bbeacosta/sctype latest

  • version: 2.14.2
Latest release: over 1 year ago - 9 downloads - 1,391 dependencies
buddej/scshc 0.1.0

  • version: 2.16.0
Latest release: over 1 year ago - 8 downloads - 950 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 2.16.0
Latest release: over 1 year ago - 5 downloads - 724 dependencies
kuangda/pc12 latest

  • version: 2.12.0
Latest release: almost 2 years ago - 6 downloads - 1,326 dependencies
bigomics/omicsplayground master

Self-service analytics for big omics data

  • version: 2.10.0
Latest release: 11 months ago - 9,749 downloads - 1,551 dependencies
abelean/seurat_desctools 4.1.0

  • version: 2.10.0
Latest release: over 1 year ago - 605 downloads - 1,090 dependencies
bigomics/omicsplayground-base ub2204_v2

  • version: 2.10.0
Latest release: about 1 year ago - 1,389 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 2.8.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
jesusgf23/allenseurat latest

  • version: 2.14.2
Latest release: over 1 year ago - 328 downloads - 933 dependencies
chiajungl/smk-scrna-extra 4.3-7.30-4.3

  • version: 2.16.0
Latest release: over 1 year ago - 255 downloads - 1,384 dependencies
cmccornack/crmsc latest

  • version: 2.10.0
Latest release: over 1 year ago - 289 downloads - 1,476 dependencies
andrewatmp/testf latest

  • version: 2.14.0
Latest release: over 1 year ago - 316 downloads - 536 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 2.6.4
Latest release: over 1 year ago - 156 downloads - 1,173 dependencies
bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

  • version: 2.14.0
Latest release: over 1 year ago - 134 downloads - 752 dependencies
fallingstar10/hbsigrocker latest

  • version: 2.16.0
Latest release: over 1 year ago - 142 downloads - 1,223 dependencies
chiajungl/scrna-extra 4.3.0-1.4-4.3

  • version: 2.16.0
Latest release: over 1 year ago - 116 downloads - 1,350 dependencies
muhengliao/r_docker2 maching_learning

  • version: 2.6.4
Latest release: over 1 year ago - 115 downloads - 515 dependencies
njjai/scrattch_mapping 0.52.2

  • version: 2.14.2
Latest release: 10 months ago - 436 downloads - 867 dependencies
weizhoujp/rchtc 4.3.0

  • version: 2.16.0
Latest release: about 1 year ago - 141 downloads - 738 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 2.16.0
Latest release: over 1 year ago - 83 downloads - 679 dependencies
nathanprovin/cellcom 1.2.2

  • version: 2.16.0
Latest release: over 1 year ago - 82 downloads - 596 dependencies
jafoltz/sc_python 8

  • version: 2.10.0
Latest release: over 1 year ago - 63 downloads - 438 dependencies
andrewatmp/qiime_unzip latest

  • version: 2.14.0
Latest release: about 1 year ago - 93 downloads - 598 dependencies
dhspence/docker-rstudio-python latest

  • version: 2.14.0
Latest release: over 1 year ago - 60 downloads - 272 dependencies
stefanucciluca/tregopathies latest

  • version: 2.14.2
Latest release: about 1 year ago - 72 downloads - 488 dependencies
etycksen/sc_deluxe 0.2

  • version: 2.14.2
Latest release: 12 months ago - 249 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 2.10.0
Latest release: over 1 year ago - 50 downloads - 1,095 dependencies
brusconi/seurat latest

  • version: 2.16.0
Latest release: over 1 year ago - 67 downloads - 536 dependencies
biomehub/encodestatsbase 0.0.5

Basic docker image used as a base for EncodeStats.

  • version: 2.16.0
Latest release: about 1 year ago - 50 downloads - 853 dependencies
nfancy/scflow dev

  • version: 2.14.2
Latest release: over 1 year ago - 44 downloads - 778 dependencies
jlphillips/csci 2024-Spring

MTSU Department of Computer Science Stack

  • version: 2.14.0
Latest release: 10 months ago - 432 downloads - 3,721 dependencies
fluentin55/singlecell_docker 1.2

  • version: 2.14.0
Latest release: over 1 year ago - 40 downloads - 452 dependencies
jonasmrr/scrnaseq-pipeline latest

  • version: 2.14.0
Latest release: over 1 year ago - 35 downloads - 356 dependencies
wyangwu/r4.1.2 latest

  • version: 2.10.0
Latest release: over 1 year ago - 67 downloads - 827 dependencies
bioxfu/xseurat2 latest

  • version: 2.14.0
Latest release: over 1 year ago - 36 downloads - 982 dependencies
robertplayer/scidap-genelists v3.0.0

  • version: 2.10.0
Latest release: 12 months ago - 74 downloads - 609 dependencies
chunjiesamliu/scmocha latest

  • version: 2.16.0
Latest release: over 1 year ago - 43 downloads - 1,258 dependencies
denglab/vpfkit latest

  • version: 2.12.0
Latest release: over 1 year ago - 36 downloads - 632 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 2.12.0
Latest release: over 1 year ago - 38 downloads - 2,089 dependencies
chiajungl/scrna 4.3.0-5.0

  • version: 2.16.0
Latest release: 10 months ago - 46 downloads - 1,312 dependencies
repbioinfo/transformgampoi latest

  • version: 2.10.0
Latest release: about 1 year ago - 28 downloads - 1,664 dependencies
bioedge/edge_24_1_ubuntu18 20231115

  • version: 2.14.0
Latest release: 12 months ago - 40 downloads - 2,569 dependencies
jingxin/terrascpipe v0

  • version: 2.10.0
Latest release: almost 2 years ago - 25 downloads - 2,467 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 2.14.2
Latest release: over 1 year ago - 25 downloads - 1,158 dependencies
winuthayanon/rstudio RS4.3.1BM3.17

  • version: 2.16.0
Latest release: over 1 year ago - 29 downloads - 2,687 dependencies
singha53/modc v0.1

  • version: 2.10.0
Latest release: over 1 year ago - 25 downloads - 783 dependencies
cgrlab/qiime2 2023.5

  • version: 2.14.0
Latest release: over 1 year ago - 22 downloads - 526 dependencies
btrspg/vscode-dkd-env latest

  • version: 2.10.0
Latest release: over 1 year ago - 24 downloads - 1,182 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 2.14.0
Latest release: over 1 year ago - 23 downloads - 1,568 dependencies
gaspardr/r-env v1.2

My R environment for analyses and development

  • version: 2.14.2
Latest release: over 1 year ago - 39 downloads - 554 dependencies
ycli1995/bioinfo_dev 1.0.1

  • version: 2.16.0
Latest release: 11 months ago - 48 downloads - 4,337 dependencies
dnbelabc4/dnbc4dev 2.0.9

  • version: 2.14.0
Latest release: about 1 year ago - 48 downloads - 1,159 dependencies
dongminshin/sc_ppl 1.65

  • version: 2.14.0
Latest release: 8 months ago - 121 downloads - 967 dependencies
atttilacs/ds_seurat_5_extras_hdf5r latest

  • version: 2.10.0
Latest release: over 1 year ago - 21 downloads - 915 dependencies
etretiakov/rocker-session latest

  • version: 2.16.0
Latest release: over 1 year ago - 22 downloads - 2,565 dependencies
alexsickler/toolkit_subtyping v2.0

  • version: 2.10.0
Latest release: over 1 year ago - 19 downloads - 374 dependencies
vidhyagnanasekaran/rocker-single-cell v1

  • version: 2.14.0
Latest release: over 1 year ago - 18 downloads - 886 dependencies
igrisch/seuratharmony latest

  • version: 2.14.0
Latest release: over 1 year ago - 19 downloads - 931 dependencies
daemontus/software-cell-oracle latest

  • version: 2.16.0
Latest release: over 1 year ago - 15 downloads - 1,013 dependencies
ksinghal28/generate_pon 1.0

  • version: 2.10.0
Latest release: about 1 year ago - 14 downloads - 884 dependencies
pl92297/sceqtl latest

  • version: 2.14.0
Latest release: over 1 year ago - 14 downloads - 930 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 2.14.0
Latest release: almost 2 years ago - 14 downloads - 2,271 dependencies
natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

  • version: 2.14.2
Latest release: over 1 year ago - 14 downloads - 1,392 dependencies
louisk92/spapros_genebasis v1.0

  • version: 2.16.0
Latest release: over 1 year ago - 13 downloads - 1,419 dependencies
maxfieldkelsey/snakesenescence latest

image for use in snakemake

  • version: 2.10.0
Latest release: almost 2 years ago - 13 downloads - 494 dependencies
cplaisier/ccafv2_extra latest

  • version: 2.14.2
Latest release: about 1 year ago - 13 downloads - 1,463 dependencies
costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

  • version: 2.18.0
Latest release: about 1 year ago - 12 downloads - 2,685 dependencies
forest2000/seuratv5 latest

Update Seurat to version 5

  • version: 2.14.2
Latest release: about 1 year ago - 12 downloads - 1,130 dependencies
abelean/seurat_deg 4.1.0

  • version: 2.10.0
Latest release: over 1 year ago - 12 downloads - 1,083 dependencies
briansha/prepsct latest

  • version: 2.10.0
Latest release: over 1 year ago - 12 downloads - 695 dependencies
robertplayer/scidap-qiime2 stable

  • version: 2.14.0
Latest release: over 1 year ago - 12 downloads - 527 dependencies
btrspg/r-env latest

  • version: 2.18.0
Latest release: over 1 year ago - 12 downloads - 2,231 dependencies