Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : annotate

Explore the latest package usage data for annotate in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 296
Total downloads: 1,290,623

More details on packages.ecosyste.ms - JSON

prismcmap/base-clue-pseq latest

  • version: 1.68.0
Latest release: almost 3 years ago - 18 downloads - 318 dependencies
yiluxiangbei/pumpkin-gene-genomealign 20220216

  • version: 1.72.0
Latest release: almost 3 years ago - 14 downloads - 2,116 dependencies
gnwanne/decontx latest

  • version: 1.76.0
Latest release: almost 2 years ago - 18 downloads - 938 dependencies
delaugustin/r-desqeq2 v4.2

  • version: 1.72.0
Latest release: almost 2 years ago - 14 downloads - 586 dependencies
entsupml/r-with-libraries latest

  • version: 1.76.0
Latest release: almost 2 years ago - 14 downloads - 992 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 1.64.0
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
chgyi/trinity 2.8.4

  • version: 1.56.1
Latest release: over 5 years ago - 13 downloads - 795 dependencies
sebeclemence/deseq2 v1.38.1

  • version: 1.76.0
Latest release: almost 2 years ago - 15 downloads - 412 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 1.68.0
Latest release: almost 4 years ago - 12 downloads - 1,097 dependencies
intelliseqngs/bioconductor r-coverage-stats_v0.1

  • version: 1.64.0
Latest release: almost 5 years ago - 13 downloads - 185 dependencies
prismcmap/biomarker-module 26be7aa8ab48

  • version: 1.68.0
Latest release: almost 2 years ago - 183,431 downloads - 633 dependencies
evolomicsmbbt/rna_seq latest

  • version: 1.72.0
Latest release: almost 2 years ago - 62 downloads - 412 dependencies
haileyzhang/phospho-analyst v1.0.1

  • version: 1.76.0
Latest release: about 1 year ago - 50 downloads - 796 dependencies
viascientific/rstudio-app 1.0

  • version: 1.76.0
Latest release: over 1 year ago - 35 downloads - 1,074 dependencies
prismcmap/lfc-module develop

  • version: 1.68.0
Latest release: over 1 year ago - 12 downloads - 633 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 1.76.0
Latest release: almost 2 years ago - 13 downloads - 598 dependencies
evolbioinfo/deseq v1.39.0

  • version: 1.66.0
Latest release: about 4 years ago - 12 downloads - 404 dependencies
luisas/r_sc.simg latest

  • version: 1.64.0
Latest release: about 4 years ago - 12 downloads - 260 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 1.78.0
Latest release: over 1 year ago - 299 downloads - 1,422 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 1.68.0
Latest release: over 3 years ago - 12 downloads - 435 dependencies
alexthiery/seurat-monocle 0.1

  • version: 1.68.0
Latest release: almost 2 years ago - 27 downloads - 1,062 dependencies
alexthiery/archr 3.1

  • version: 1.72.0
Latest release: over 1 year ago - 133 downloads - 819 dependencies
abelean/seurat_azimuth 5b

  • version: 1.72.0
Latest release: over 1 year ago - 343 downloads - 1,141 dependencies
markataylor/r_yufree v1.0.0

  • version: 1.76.0
Latest release: almost 2 years ago - 14 downloads - 1,514 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 1.64.0
Latest release: about 4 years ago - 10 downloads - 431 dependencies
bixbeta/czid v3

  • version: 1.68.0
Latest release: over 1 year ago - 12 downloads - 421 dependencies
edkang0925/diffutr latest

  • version: 1.76.0
Latest release: almost 2 years ago - 14 downloads - 532 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.78.0, 1.76.0
Latest release: about 1 year ago - 33 downloads - 1,150 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 1.76.0
Latest release: almost 2 years ago - 10 downloads - 598 dependencies
philipp02/pathway v1

  • version: 1.77.0
Latest release: almost 2 years ago - 10 downloads - 345 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.76.0
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.78.0
Latest release: over 1 year ago - 9 downloads - 352 dependencies
am5747/methylation latest

  • version: 1.76.0
Latest release: almost 2 years ago - 10 downloads - 290 dependencies
weishwu/planet 12052022

  • version: 1.74.0
Latest release: almost 2 years ago - 9 downloads - 341 dependencies
qdidiscoveryservices/pseudobulk 1.1

  • version: 1.68.0
Latest release: over 2 years ago - 10 downloads - 1,112 dependencies
tamaraperteghella/r4_hormonit latest

  • version: 1.72.0
Latest release: over 1 year ago - 13 downloads - 1,528 dependencies
msgao/deseq2 latest

  • version: 1.72.0
Latest release: almost 2 years ago - 10 downloads - 384 dependencies
almahmoud/terra-jupyter bioc

  • version: 1.74.0
Latest release: about 2 years ago - 9 downloads - 2,217 dependencies
vegesnam/metaboanalyst 11thApr

  • version: 1.76.0
Latest release: over 1 year ago - 34 downloads - 358 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 1.68.0
Latest release: almost 2 years ago - 8 downloads - 406 dependencies
bixbeta/cluster_profiler v1

  • version: 1.68.0
Latest release: almost 2 years ago - 8 downloads - 1,038 dependencies
jieliu4wustl/wustl v0.1_20230907

  • version: 1.64.0
Latest release: about 1 year ago - 4,483 downloads - 1,124 dependencies
chaunceyzhou/awesome_rnaseq v1.3

  • version: 1.64.0
Latest release: about 1 year ago - 16 downloads - 465 dependencies
peeyushweav/weav_c5_flask v1.0.22

  • version: 1.78.0
Latest release: about 1 year ago - 2,289 downloads - 467 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 1.74.0
Latest release: almost 2 years ago - 25 downloads - 953 dependencies
codechenx/mice_aspergillus_infection_lung_project latest

  • version: 1.76.0
Latest release: over 1 year ago - 11 downloads - 427 dependencies
alexeymakhonin/bioinf-2022-notebook latest

  • version: 1.76.0
Latest release: almost 2 years ago - 9 downloads - 213 dependencies
alkoenig08/harmonyseurat latest

Docker container built on satijalab/seurat with Broad Institute's "Harmony" package installed.

  • version: 1.76.0
Latest release: over 1 year ago - 15 downloads - 931 dependencies
andyvs/testimage 3.0

  • version: 1.76.0
Latest release: over 1 year ago - 11 downloads - 376 dependencies
viascientific/deseq2-docker 2.0

  • version: 1.76.0
Latest release: over 1 year ago - 36 downloads - 375 dependencies
apollodorus/genentech-jp v1

  • version: 1.72.0
Latest release: almost 2 years ago - 22 downloads - 1,947 dependencies
mhettich0years/r-images v1.1.2

  • version: 1.76.0
Latest release: almost 2 years ago - 11 downloads - 334 dependencies
bixbeta/pavian v1

  • version: 1.68.0
Latest release: almost 2 years ago - 8 downloads - 388 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.76.0
Latest release: almost 2 years ago - 8 downloads - 1,031 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 1.64.0
Latest release: almost 5 years ago - 8 downloads - 2,128 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.74.0
Latest release: over 1 year ago - 75 downloads - 512 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.76.0
Latest release: over 1 year ago - 15 downloads - 1,562 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 1.76.0
Latest release: over 1 year ago - 8 downloads - 1,038 dependencies
srynobio/diagnostic_rnaseq latest

  • version: 1.78.0
Latest release: over 1 year ago - 108 downloads - 1,441 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.76.0
Latest release: almost 2 years ago - 8 downloads - 1,604 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 1.72.0
Latest release: over 1 year ago - 8 downloads - 1,347 dependencies
ntobias85/abe_repo degust_build

  • version: 1.77.0, 1.62.0
Latest release: over 1 year ago - 6 downloads - 1,339 dependencies
madhu99/sb6 latest

  • version: 1.76.0
Latest release: almost 2 years ago - 7 downloads - 666 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.72.0
Latest release: over 1 year ago - 38 downloads - 2,387 dependencies
shl198/rna_ppl latest

  • version: 1.74.0
Latest release: almost 2 years ago - 20 downloads - 2,099 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.76.0
Latest release: over 1 year ago - 35 downloads - 1,720 dependencies
bicore/gcs_10x_rnaseq_qc 4.2.0

  • version: 1.74.0
Latest release: almost 2 years ago - 8 downloads - 1,454 dependencies
mfsentma/rna latest

  • version: 1.72.0
Latest release: over 1 year ago - 7 downloads - 807 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 1.76.0
Latest release: over 1 year ago - 25 downloads - 1,319 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.76.0
Latest release: over 1 year ago - 11 downloads - 3,115 dependencies
weishwu/diffbind 3.6.5

  • version: 1.74.0
Latest release: almost 2 years ago - 10 downloads - 1,507 dependencies
wlc27/dcanr v1

  • version: 1.76.0
Latest release: almost 2 years ago - 10 downloads - 1,681 dependencies
fgualdr/env_perm_motifs latest

  • version: 1.76.0
Latest release: over 1 year ago - 10 downloads - 584 dependencies
yaobio/archr-4g latest

Docker images for ArchR (Analysis of Regulatory Chromatin in R)

  • version: 1.72.0
Latest release: over 1 year ago - 11 downloads - 643 dependencies
ericsalomaki/mirna 071723

  • version: 1.72.0
Latest release: over 1 year ago - 10 downloads - 1,834 dependencies
archang/seurat-zellk latest

  • version: 1.76.0
Latest release: over 1 year ago - 9 downloads - 935 dependencies
winuthayanon/seurat 4.3.0

  • version: 1.76.0
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
hbadrane/fungap version3

  • version: 1.64.0
Latest release: about 1 year ago - 44 downloads - 479 dependencies
tamaraperteghella/r4_gencode latest

  • version: 1.72.0
Latest release: over 1 year ago - 8 downloads - 1,460 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.68.0
Latest release: over 1 year ago - 9 downloads - 1,061 dependencies
chlazaris/dge_env 0.1

  • version: 1.72.0
Latest release: over 1 year ago - 9 downloads - 320 dependencies
preethiilumina/diffbind 1.5

fixed genome name

  • version: 1.76.0
Latest release: 9 months ago - 155 downloads - 626 dependencies
rayne233/lcms latest

  • version: 1.72.0
Latest release: over 1 year ago - 11 downloads - 658 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.78.0
Latest release: 8 months ago - 51 downloads - 1,224 dependencies
phenomedb/phenomedb-api-npc latest

  • version: 1.76.0
Latest release: over 1 year ago - 10 downloads - 1,310 dependencies
c00cjz00/imputationserver v1.5.7.v1

  • version: 1.56.2
Latest release: over 1 year ago - 9 downloads - 1,558 dependencies
hwt940810/wentaohan_altanalyze_0.7 latest

  • version: 1.60.1
Latest release: over 1 year ago - 8 downloads - 801 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 1.76.0
Latest release: over 1 year ago - 7 downloads - 469 dependencies
adfncgr/mpr-genotyping latest

  • version: 1.78.0
Latest release: almost 2 years ago - 9 downloads - 437 dependencies
trust1/jmml latest

JMML classifier

  • version: 1.72.0
Latest release: about 2 years ago - 8 downloads - 658 dependencies
suimye/cage_box latest

  • version: 1.76.0
Latest release: over 1 year ago - 7 downloads - 698 dependencies