Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : VariantAnnotation
Explore the latest package usage data for VariantAnnotation in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 102
Total downloads: 59,775
More details on packages.ecosyste.ms - JSON
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 1.32.0
mirekphd/ml-cpu-r36-rs-cust latest
- version: 1.24.2
mirekphd/ml-cpu-r36-base latest
- version: 1.24.2
mirekphd/ml-cpu-r35-rs 20190201
- version: 1.24.2
dhspence/docker-sicer latest
- version: 1.26.1
dhspence/docker-basestation latest
- version: 1.26.1
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 1.34.0
dhspence/docker-dss latest
- version: 1.32.0
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1
- version: 1.20.2
biocontainers/bioconductor-variantannotation v1.20.2-1b1-deb_cv1
- version: 1.20.2
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1
- version: 1.20.2
hoonbiolab/hmftools v1.1
- version: 1.38.0
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1
- version: 1.20.2
chgyi/bio 3.5.1
- version: 1.26.1
dhspence/docker-manta 1.5.0
- version: 1.26.1
dhspence/docker-hiccompare latest
- version: 1.32.0
kcapd/wings-genomics latest
WINGS workflow system with software for genomics operations.
- version: 1.20.3
mirekphd/ml-cpu-r35-rdp 20180918
- version: 1.26.1
testalabgh/downstream signac-1.4.0
- version: 1.40.0
dhspence/docker-vep 93
- version: 1.26.1
khoulaha/jabba v1.0.0
- version: 1.42.1
kcapd/wings-genomics-full latest
- version: 1.20.3
mirekphd/ml-cpu-r36-rs 20200131
- version: 1.24.2
hoonbiolab/variantannotation_r v1.1
- version: 1.32.0
mattjmeier/r-odaf-hc-prod latest
- version: 1.44.0
hoonbiolab/titan v1.1
- version: 1.32.0
keithgraham5/cnvrobot_v4_2 latest
- version: 1.32.0
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 1.46.0
mbaardwijk/hmftools latest
- version: 1.40.0
haileyzhang/fragpipe-analyst v0.23
A Docker container of Fragpipe-Analyst
- version: 1.44.1
gnwanne/decontx latest
- version: 1.44.0
skoyamamd/scoreinvhap latest
- version: 1.40.0
dhspence/docker-wg-basestation latest
- version: 1.32.0
qdidiscoveryservices/sc_pip_r_and_py latest
- version: 1.36.0
intelliseqngs/bioconductor r-coverage-stats_v0.1
- version: 1.32.0
mtorresm55/r_env_4_1_0 v1.0
- version: 1.40.0
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 1.44.0
qdidiscoveryservices/seurat_tidyverse latest
- version: 1.36.0
sparktx/gviz 1.40.1
- version: 1.42.1
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 1.44.0, 1.46.0
mattjmeier/r-odaf-hc-base latest
- version: 1.44.0
philipp02/pathway v1
- version: 1.45.0
stormgod/deepmaps-cpu latest
- version: 1.44.1
apollodorus/polyglot v1
- version: 1.44.0
hoonbiolab/hmftools_purple v3.7.2
- version: 1.44.0
hoonbiolab/hmftools_snv v3.2.2
- version: 1.44.0
breezykermo/gvis latest
- version: 1.32.0
hoonbiolab/testbattenberg v1.0
- version: 1.32.0
kdgosik/main-gitpod latest
- version: 1.44.1
duclare123/vizcnv_dev latest
Visualization tool for WGS analysis
- version: 1.44.1
gesiscss/binder-ngs-2ddocs-2d2018-2dggg201a-e01a75 18ae0fd4cd73f6d612f276af6afe6fdd663e2724
- version: 1.32.0
hoonbiolab/clustersv v1.1
- version: 1.32.0
hoonbiolab/hmftools_linx v1.23.1
- version: 1.44.0
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd
- version: 1.32.0
compbiocore/lee_isg_erv 20230306
- version: 1.44.1
hoonbiolab/hmftools_cnv v3.8.4
- version: 1.44.0, 1.46.0
mziemann/meth_analysis latest
Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data
- version: 1.40.0
hoonbiolab/hmftools_sv v.2.13.2
- version: 1.44.0
jmonlong/terra-rstudio-custom 0.0.1
- version: 1.44.0
samplix/droplet-viewer-internal latest
- version: 1.38.0
compbiocore/jupyterhub-docker-images-jh_image 20230524
- version: 1.44.1
wlc27/dcanr v1
- version: 1.44.0
ericsalomaki/mirna 071723
- version: 1.40.0
winuthayanon/seurat 4.3.0
- version: 1.44.1
brianyee/cropseq-essentials 1.0.0
- version: 1.40.0
smemane20/error_thres_amd_64 latest
- version: 1.46.0
khoulaha/shatterseek v1.0.0
- version: 1.36.0
cbgr/cager261 1.4
Container for the CAGEr tool version 2.6.1.
- version: 1.46.0
suimye/cage_box latest
- version: 1.44.1
mapostolides/test12345 latest
- version: 1.32.0
bigomics/omicsplayground master
Self-service analytics for big omics data
- version: 1.40.0
bigomics/omicsplayground-base ub2204_v2
- version: 1.40.0
datashield/rock-dolomite-xenon latest
- version: 1.46.0
cmccornack/crmsc latest
- version: 1.40.0
fallingstar10/hbsigrocker latest
- version: 1.46.0
nciccbr/ccbr_r_4.3.0 v1
- version: 1.46.0
almurphy/mungesumstats latest
- version: 1.47.0
indraniel/chip-pipeline-annotation v1
- version: 1.44.1
alexsickler/open-pedcan latest
- version: 1.32.0
omicschef/epigenomechef v1.1.3
- version: 1.46.0
wyangwu/r4.1.2 latest
- version: 1.40.0
bioxfu/xseurat2 latest
- version: 1.44.0
gevrony/hidef-seq 1.2
- version: 1.40.0
chunjiesamliu/scmocha latest
- version: 1.46.0
mskilab/hetpileups latest
- version: 1.36.0
scwatts/bolt_gpgr 0.1.0
- version: 1.40.0
skchronicles/genome-seek_trim_map latest
Official docker image for trimming and alignment with genome-seek
- version: 1.44.1
winuthayanon/rstudio RS4.3.1BM3.17
- version: 1.46.0
imegusu/rstudio_rnaseq_all3 latest
RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq
- version: 1.44.1
ycli1995/bioinfo_dev 1.0.1
- version: 1.46.0
etretiakov/rocker-session latest
- version: 1.46.0
andrewrrelmore/genepi_vscode test
- version: 1.44.1
skchronicles/genome-seek v0.1.0
Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek
- version: 1.44.1
cgrlab/centos7_bfx 1.0.0
- version: 1.44.1