Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : Rhtslib
Explore the latest package usage data for Rhtslib in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 333
Total downloads: 1,374,524
More details on packages.ecosyste.ms - JSON
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 2.0.0, 1.26.0
nfcore/methylseq dev
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.
- version: 1.24.0
nfcore/eager 2.5.0
A Docker image for the nf-core/eager pipeline.
- version: 1.22.0
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 1.18.1
biocontainers/isee-galaxy v3.13_cv1.0.0
- version: 1.25.1
nfcore/airrflowreport dev
- version: 2.0.0
nfcore/circrna dev
Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.
- version: 1.18.0
nfcore/sarek 2.7.2
A Docker container for the nf-core/sarek pipeline
- version: 1.22.0
nfcore/hic dev
A docker container for the nf-core/hic pipeline.
- version: 1.20.0
nfcore/nanoseq dev
Nanopore demultiplexing, QC and alignment pipeline
- version: 1.22.0
nfcore/scrnaseq dev
A Docker Container for the nf-core/scrnaseq pipeline.
- version: 1.18.0
seglh/exomedepth f4716ad
- version: 1.28.0
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 1.20.0
dhspence/docker-dss latest
- version: 1.18.1
cimendes/splicing-pipelines-nf 3.1.ubuntu
- version: 1.24.0
koki/sctensor-experiments 20220208
- version: 1.26.0
koki/biocdev 20230818
- version: 2.3.0
anand7899/rmarkdown latest
- version: 2.0.0
prismcmap/sushi develop
- version: 1.22.0
hoonbiolab/hmftools v1.1
- version: 1.24.0
dhspence/docker-hiccompare latest
- version: 1.18.1
crukmi/mesa main
- version: 1.99.5
testalabgh/downstream signac-1.4.0
- version: 1.26.0
gene110/reportnipt550 latest
- version: 1.18.1
dolphinnext/ont_variant_calling 1.0
- version: 2.0.0
intelliseqngs/task_bam-exon-depth 1.0.4
- version: 1.18.1
koki/annotationhub 20210323
- version: 1.22.0
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520
- version: 1.18.0
tipsarin/rstudio 4.1.3viraltrack
- version: 1.26.0
lorentzb/gene8940_r 1.0
- version: 2.0.0
doejgi/trinityrnaseq-wdl 2.11.0b
- version: 2.0.0, 1.18.1
maestsi/nf-m6anet v1
- version: 1.22.0
khoulaha/jabba v1.0.0
- version: 2.0.0
koki/tensor-projects-machima 20220827
- version: 1.28.0
hoonbiolab/pepatac v1.1
- version: 1.24.0
mbwali/jupyterlab qiime2023
- version: 2.0.0
qdidiscoveryservices/batch_correction latest
- version: 1.20.0
crukmi/mesa_dependencies latest
- version: 2.0.0
broadcptacdev/panoply_so_nmf_report 9bb503e
- version: 1.18.1
trust1/rbox v1
Methylation array work toolbox
- version: 1.22.0
koki/urchin_workflow_seurat 20230616
- version: 2.0.0
dmiller15/minfi 4.2.0
- version: 1.28.0
hoonbiolab/variantannotation_r v1.1
- version: 1.18.1
mattjmeier/r-odaf-hc-prod latest
- version: 2.0.0
koki/velocytor 20221015
- version: 1.28.0
koki/workflow 20210327
- version: 1.22.0
galclbl/epityping latest
A repository for the epityping tool container
- version: 2.0.0
hoonbiolab/lohhla v1.1
- version: 1.18.0
jpsmith5/peppro latest
- version: 2.0.0
alanocallaghan/high-dimensional-stats-r latest
- version: 2.1.0
sagnikbanerjee15/ngpint 1.0.0
- version: 1.27.0
hoonbiolab/titan v1.1
- version: 1.18.1
haileyzhang/lfq-analyst v1.2.6
A docker container for LFQ-Analyst
- version: 2.0.0
prangannath/rna_seq latest
Container for EvolOMICS RNA_Seq pipeline
- version: 1.26.0
luisas/rfasta latest
- version: 1.18.1
crukmi/target-snakemake-docker latest
- version: 1.18.1
keithgraham5/cnvrobot_v4_2 latest
- version: 1.18.0
markshill/clustering_tree_building-env latest
- version: 2.0.0
luisas/rde latest
- version: 1.18.1
sheddn/bioinformatics-tools latest
- version: 1.26.0
weishwu/systempiper 12022022
- version: 1.28.0
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 2.2.0
biodancer/nasap_performance latest
write later
- version: 1.26.0
leepc12/test-jupyterhub v0.2.0
test-jupyterhub
- version: 2.0.0
fgualdr/envrperm latest
- version: 2.0.0
luisas/r_sc latest
- version: 1.18.1
mbaardwijk/hmftools latest
- version: 1.26.0
h836472/cs_mainimage test
- version: 1.26.0
souckmi/arriba 1.7
- version: 1.18.1
luisas/rannotation latest
- version: 1.18.1
haileyzhang/fragpipe-analyst v0.23
A Docker container of Fragpipe-Analyst
- version: 2.0.0
yiluxiangbei/pumpkin-genomealign-notebook 1.0
- version: 1.26.0
gongx030/ensemblemerge 2.1.24
Docker image for running ensemblemerge package.
- version: 2.0.0
prismcmap/base-clue-pseq latest
- version: 1.22.0
yiluxiangbei/pumpkin-gene-genomealign 20220216
- version: 1.26.0
gnwanne/decontx latest
- version: 2.0.0
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest
- version: 1.18.1
skoyamamd/scoreinvhap latest
- version: 1.26.0
dhspence/docker-wg-basestation latest
- version: 1.18.1
byjin/sqtl 2.0
r docker for sqtl-seeker2( try )
- version: 2.0.0
lemoniada/test pipeline
- version: 2.0.0
hoonbiolab/chromothripsis v1.0
- version: 1.26.0
luisas/rannotation_forcats latest
- version: 1.18.1
qdidiscoveryservices/sc_pip_r_and_py latest
- version: 1.22.0
intelliseqngs/bioconductor r-coverage-stats_v0.1
- version: 1.18.0
kisudsoe/r-base latest
- version: 2.0.0
sebrauschert/amplicon_pipeline v0.3.2
A pipeline for amplicon sequencing analysis of marine fish
- version: 2.2.0
evolomicsmbbt/rna_seq latest
- version: 1.26.0
haileyzhang/phospho-analyst v1.0.1
- version: 2.0.0
broadcptacdev/activedriver latest
- version: 1.18.1
mtorresm55/r_env_4_1_0 v1.0
- version: 1.26.0
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 2.0.0
luisas/r_sc.simg latest
- version: 1.18.1
crpeters/r-methylkit 4.2.1
- version: 2.0.0
bioconductor/ismb.osca 124cbc0
- version: 2.2.0