prismcmap/depmap_versions dd55695d58fb

dhspence/docker-homer latest

docker with chip-seq tool homer

nfcore/exoseq dev

A docker container for the ExoSeq pipeline

tercen/runtime-r35 3.5.3-7

davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

gesiscss/singleuser-orc r2d-49e91d9

intelliseqngs/gatk-4.1.7.0-grch38-no-alt 1.0.1

afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

ctomlins/mblast latest

gesiscss/binder-matjesg-2dais-5f2019-df9f9f c588d97bc20b1345ea549a5260d2ec36137e911b

seglh/exomedepth f4716ad

intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

beakernotebook/beaker-base latest

Base image for building beaker docker image

afcai2c/r-studio rebuild

Basic installation of R Studio.

gene110/nipt_report latest

dragonflyscience/shellington 2021-09-14

gesiscss/binder-numeconcopenhagen-2dlectures-2d2020-a504cd 3037261943dce17c68a5d932223d3724580e1671

nextgenusfs/funannotate-slim v1.8.15

Base funannotate image (no databases)

ashish1981/z-reference-implementation latest

dragonflyscience/wfm-reports-20.04 2022-10-14

nfcore/ddamsproteomics dev

A Docker image for the nf-core/ddamsproteomics pipeline.

kbase/kbase_base latest

KBase Base Image containing Core services and runtime

afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

tercen/tercen_studio 4.0.4-1

kbase/sdkbase latest

gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52

rapporteket/base-r 4.2.2

rocker/gdal latest

Build gdal separately to avoid timeouts

gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

prismcmap/drc-module robust_DRC

ferlabcrsj/all-spark-notebook 3.2.0

Spark notebook images

databrewllc/data-anonymization production

veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

dhspence/docker-sicer latest

evolbioinfo/table2itol fa4b43c

The table2itol.R script makes it easy to generate iTOL annotations from spreadsheet files.

biocontainers/mitohifi 3.0.0_cv1

fazenda/r-testing latest

ESTATCAMP's R testing environment.

gesiscss/binder-matthewfeickert-2dr-2din-2djupyter-2dwith-2dbinder-9238b6 626237279a85c2e332948f75fcc08fb13a303a97

focaloiddev/shiny latest.slimxx

qdidiscoveryservices/limma-voom 4.2.0

veitveit/protprotocols_template latest

For details, see https://github.com/ProtProtocols/biocontainer-jupyter

phidata/jupyterlab 3.5.2

openmicroscopy/training-notebooks 0.7

A set of Notebooks to demonstrate how to access the images and metadata from OMERO

tercen/operator_base 1.0.5

recetox/aplcms latest

namshi/docker-r-base ashiddo11-patch-1

Base image for r projects.

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

prismcmap/norm-module 26be7aa8ab48

dragonflyscience/dragonforest-20.04 20220711_1155

nuest/ten-simple-rules-dockerfiles latest

intelliseqngs/gatk-4.2.4.1-hg38 1.0.0

cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

kraigerl95/jupyternotebook-r stable

Jupyter Notebook wiht personal changes

gesiscss/binder-arnim-2drstan-2dbinder-55f747 090d5b5cb3a32d8b6f3ff1a32478165045a813e2

almahmoud/bioconductor_docker RELEASE_3_17

rprotobuf/ci latest

Continued Integration of RProtoBuf

vanallenlab/sv-pipeline-qc gnomad_v3_qc

gesiscss/binder-bollwyvl-2djupyterlab-2dlsp-902099 53686d0e9aaaba4590911e5cc745f7e933bcca08

intelliseqngs/task_vcf-concat-beagle 1.1.3

gesiscss/binder-jupyterlab-2djupyterlab-2ddemo-b2f8d0 5a5eb6bb04250b199a1cbb529e744075216a17a5

datalabauth/covid19 latest

Webapp for visualizing COVID-19 data

intelliseqngs/task_vcf-vqsr-snp-recalib-hg38 1.1.2

intelliseqngs/resources longranger_v0.1

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-hg38 1.0.2-chrY-and-the-rest

dhspence/docker-basestation latest

intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

qdidiscoveryservices/py3_cellranger 6.1.2

inseefrlab/onyxia-sparkr r4.3.2-spark3.5.0-2024.01.15

A minimal R environment configured to use Spark through the SparkR package.

openanalytics/shinyproxy-juypter-datascience latest

ocdr/dkube-datascience-rs-sk-cpu test-py

bactopia/tools-roary 1.7.1

bactopia/tools-phyloflash 1.7.1

mlepetit/cellphonedb 3.0.0

nuest/rockerverse-paper latest

veitveit/complexbrowser release-1.6

qdidiscoveryservices/handle_meta latest

dragonflyscience/kakapodock 2022-02-01

rapporteket/rap-dev-data nodata

Tailor-made

austinhpatton123/r-4.2.2_uniprot.ws 2.38.0

rhub/linux-builder 0.10

mirekphd/ml-cpu-r35-jnb devel_2b2752c

dhspence/docker-dss latest

hoonbiolab/align_dna v1.3

tercen/flowsom 0.2.3

koki/pagoda latest

rapporteket/rap-dev latest

biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1

ashish1981/s390x-shiny-server 3.6.3

gesiscss/binder-wshuyi-2ddemo-2dgganimate-2dnycflights-d5bc2b 5f3e2bb06e5a294f29984b39e72ce8f748e488e3

gesiscss/binder-5harad-2dcss-72552b f9b37b2f2052c9f4026d310831c97af74c4e8f2e

gesiscss/binder-berndweiss-2dcc-2dmeta-2danalysis-2d2019-941484 c053ec60b79546707aac60ff36d82f683ac01db5

veitveit/polystest release-1.3.4

biocontainers/bioconductor-ensembldb v1.6.2-1-deb_cv1