Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : R.methodsS3

Explore the latest package usage data for R.methodsS3 in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 602
Total downloads: 1,957,495

More details on packages.ecosyste.ms - JSON

rocker/ropensci latest

  • version: 1.7.1
Latest release: over 6 years ago - 88,618 downloads - 1,589 dependencies
180a51c0/gh-action-buildapp latest

  • version: 1.8.0
Latest release: over 4 years ago - 48,804 downloads - 1,987 dependencies
nfcore/smrnaseq dev

A Docker container for the nf-core/smrnaseq pipeline.

  • version: 1.7.1
Latest release: over 3 years ago - 38,754 downloads - 320 dependencies
rocker/r-parallel 1.0.1

  • version: 1.7.1
Latest release: about 5 years ago - 29,497 downloads - 427 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.8.2
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 1.8.1
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.8.2
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.8.1
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 1.8.1
Latest release: about 3 years ago - 3,931 downloads - 1,734 dependencies
patroonorg/patroondeps latest

  • version: 1.8.2
Latest release: over 1 year ago - 2,754 downloads - 1,677 dependencies
nfcore/bcellmagic dev

A preliminary container for the bcellmagic pipeline

  • version: 1.8.0
Latest release: over 3 years ago - 2,594 downloads - 298 dependencies
dhspence/docker-biscuit latest

  • version: 1.7.1
Latest release: almost 6 years ago - 1,935 downloads - 807 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.8.1
Latest release: about 2 years ago - 1,202 downloads - 654 dependencies
nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

  • version: 1.8.1
Latest release: over 2 years ago - 1,052,189 downloads - 607 dependencies
ebsproject/af-aeo dev-ecs-23.06.13

  • version: 1.8.1
Latest release: over 1 year ago - 31,036 downloads - 586 dependencies
nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 1.8.1
Latest release: over 3 years ago - 7,707 downloads - 423 dependencies
biocontainers/oncocnv v7.0_cv2

  • version: 1.8.2
Latest release: about 2 years ago - 12,111 downloads - 307 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.8.0
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
intelliseqngs/task_vcf-qc 1.4.0

  • version: 1.8.2
Latest release: about 2 years ago - 1,408 downloads - 604 dependencies
hoonbiolab/cellranger v1.0

  • version: 1.8.1
Latest release: almost 3 years ago - 919 downloads - 682 dependencies
dg520/rsimple 1.1

  • version: 1.8.2
Latest release: almost 2 years ago - 777 downloads - 403 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.7.1
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 1.8.1
Latest release: 12 months ago - 1,452 downloads - 633 dependencies
nfcore/exoseq dev

A docker container for the ExoSeq pipeline

  • version: 1.7.1
Latest release: about 6 years ago - 1,158 downloads - 616 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 1.8.1
Latest release: over 2 years ago - 635 downloads - 1,650 dependencies
gene110/nipt_report latest

  • version: 1.8.1
Latest release: over 3 years ago - 785 downloads - 676 dependencies
prismcmap/drc-module robust_DRC

  • version: 1.8.1
Latest release: over 1 year ago - 539 downloads - 647 dependencies
dhspence/docker-sicer latest

  • version: 1.7.1
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.8.2
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
prismcmap/norm-module 26be7aa8ab48

  • version: 1.8.1
Latest release: almost 2 years ago - 380 downloads - 633 dependencies
gesiscss/binder-bollwyvl-2djupyterlab-2dlsp-902099 53686d0e9aaaba4590911e5cc745f7e933bcca08

  • version: 1.8.1
Latest release: almost 4 years ago - 334 downloads - 3,749 dependencies
dhspence/docker-basestation latest

  • version: 1.7.1
Latest release: over 5 years ago - 308 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.8.0
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
inseefrlab/onyxia-sparkr r4.3.2-spark3.5.0-2024.01.15

A minimal R environment configured to use Spark through the SparkR package.

  • version: 1.8.2
Latest release: 11 months ago - 1,249 downloads - 2,922 dependencies
nuest/rockerverse-paper latest

  • version: 1.7.1
Latest release: about 4 years ago - 286 downloads - 1,133 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 1.7.1
Latest release: over 6 years ago - 271 downloads - 9,222 dependencies
dhspence/docker-dss latest

  • version: 1.8.0
Latest release: over 4 years ago - 367 downloads - 1,127 dependencies
hoonbiolab/align_dna v1.3

  • version: 1.8.1
Latest release: about 3 years ago - 275 downloads - 794 dependencies
tercen/flowsom 0.2.3

  • version: 1.8.1
Latest release: about 3 years ago - 277 downloads - 805 dependencies
biocontainers/bioconductor-aroma.light v3.4.0-1-deb_cv1

  • version: 1.7.1
Latest release: over 6 years ago - 481 downloads - 396 dependencies
tercen/runtime-flowsuite 3.15-4

  • version: 1.8.2
Latest release: about 2 years ago - 353 downloads - 1,641 dependencies
gesiscss/binder-benmarwick-2drrtools-9a1629 3f830bce55e733f17e599a632a4e930ee82b8edb

  • version: 1.7.1
Latest release: over 3 years ago - 200 downloads - 1,122 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 1.8.1
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
prismcmap/sushi develop

  • version: 1.8.2
Latest release: 10 months ago - 221 downloads - 723 dependencies
gesiscss/binder-wlandau-2ddrake-2dexamples-d960ed 73134a125630b10d47c10b5c038ba7d3af6fec16

  • version: 1.7.1
Latest release: over 3 years ago - 180 downloads - 1,264 dependencies
inseefrlab/travail-collaboratif 0.1.0

  • version: 1.8.2
Latest release: about 2 years ago - 176 downloads - 1,119 dependencies
dhspence/docker-cnvkit2 latest

now emacs enhanced!

  • version: 1.7.1
Latest release: about 6 years ago - 172 downloads - 619 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 1.8.2
Latest release: about 2 years ago - 172 downloads - 962 dependencies
chgyi/bio 3.5.1

  • version: 1.7.1
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
nuest/reproducible-research-at-giscience latest

  • version: 1.8.0
Latest release: over 3 years ago - 139 downloads - 1,132 dependencies
hoonbiolab/hl_base v1.2

  • version: 1.8.1
Latest release: about 2 years ago - 136 downloads - 873 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.7.1
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 1.7.1
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
evolbioinfo/r-evol v4.2.2

r with ape and big.phylo packages

  • version: 1.8.2
Latest release: over 1 year ago - 123 downloads - 594 dependencies
dhspence/docker-hiccompare latest

  • version: 1.8.0
Latest release: over 3 years ago - 113 downloads - 1,271 dependencies
peterdjames/r_base_with_packs_incl_rkdb r-base

  • version: 1.8.1
Latest release: almost 2 years ago - 614 downloads - 1,721 dependencies
atttilacs/seurat_big latest

  • version: 1.8.2
Latest release: almost 2 years ago - 495 downloads - 997 dependencies
vnmd/afni_20.1.18 latest

  • version: 1.8.0
Latest release: over 4 years ago - 100 downloads - 908 dependencies
dhspence/docker-cnvkit latest

  • version: 1.7.1
Latest release: almost 7 years ago - 97 downloads - 542 dependencies
inseefrlab/funcamp-r-base experiment-dev

Base image for the FuncampR project

  • version: 1.8.2
Latest release: about 1 year ago - 194 downloads - 561 dependencies
cepremap/dynare-jupyter v0.1.4

Debian stable + Dynare + Jupyter

  • version: 1.7.1
Latest release: over 6 years ago - 100 downloads - 1,630 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 1.7.1
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 1.8.1
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
testalabgh/downstream signac-1.4.0

  • version: 1.8.2
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
atttilacs/dsp_giotto latest

  • version: 1.8.2
Latest release: about 2 years ago - 101 downloads - 1,154 dependencies
tercen/flowsom_mst 0.1.6

  • version: 1.8.1
Latest release: about 3 years ago - 88 downloads - 787 dependencies
hoonbiolab/cnvkit v1.1

  • version: 1.8.1
Latest release: about 3 years ago - 83 downloads - 817 dependencies
gene110/reportnipt550 latest

  • version: 1.8.1
Latest release: over 3 years ago - 88 downloads - 577 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.8.1, 1.8.0
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
tercen/flowsuite 0.0.4

  • version: 1.8.1, 1.8.0
Latest release: over 2 years ago - 99 downloads - 1,512 dependencies
gesiscss/binder-darribas-2dgds-5fucm19-a1b96e 27cbafcf6a865910a18b835a4efc47e9fd532696

  • version: 1.7.1
Latest release: almost 5 years ago - 73 downloads - 1,567 dependencies
gesiscss/binder-ljcolling-2dfischer-2dbinder-a55eb0 0c95fab086c38e0551a01c40d53ae66232e95552

  • version: 1.7.1
Latest release: over 4 years ago - 72 downloads - 323 dependencies
gesiscss/binder-wlandau-2dlearndrake-4eaf31 37504de3434ab3b0fedf8680a95efeeb605bef4d

  • version: 1.8.0
Latest release: over 4 years ago - 72 downloads - 447 dependencies
databrewllc/reconmonitoring d0dd994

  • version: 1.8.2
Latest release: almost 2 years ago - 78 downloads - 321 dependencies
vanessa/rstudio-neuro latest

Dockerized rstudio with some statistics and neuro packages!

  • version: 1.7.1
Latest release: almost 7 years ago - 66 downloads - 199 dependencies
qdidiscoveryservices/quantiseqr v1

  • version: 1.8.1
Latest release: over 2 years ago - 65 downloads - 1,201 dependencies
tercen/flowsom_operator 1.6.0

  • version: 1.8.1
Latest release: almost 2 years ago - 105 downloads - 1,563 dependencies
inseefrlab/onyxia-rstudio-sparkr r4.3.1-spark3.4.1-2023.09.04

A RStudio service built on top of a R environment with SparkR.

  • version: 1.8.2
Latest release: about 1 year ago - 309 downloads - 2,814 dependencies
sktrinh12/romiq-ctnr latest

r instance for testing

  • version: 1.8.1
Latest release: almost 4 years ago - 59 downloads - 1,195 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 1.7.1
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
dhspence/docker-vep 93

  • version: 1.7.1
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 1.7.1
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
vnmd/afni_20.2.13 latest

  • version: 1.8.0
Latest release: over 4 years ago - 53 downloads - 906 dependencies
qdidiscoveryservices/bam_to_10x_counts_pandoc latest

  • version: 1.8.2
Latest release: almost 2 years ago - 51 downloads - 964 dependencies
gesiscss/binder-jeffreydurieux-2dpsychometrics8-5f3-136fb1 ff372f2700ad7c3deb527e9d2db2ef5476a146ad

  • version: 1.7.1
Latest release: almost 5 years ago - 50 downloads - 1,186 dependencies
hoonbiolab/cnvpytor v1.1

  • version: 1.8.1
Latest release: about 3 years ago - 52 downloads - 807 dependencies
gesiscss/binder-laderast-2digraphtutorial-6fd208 92190a066287a7b0bf379a7d9e2d5802f96be94f

  • version: 1.7.1
Latest release: almost 5 years ago - 47 downloads - 1,179 dependencies
cvriend/afni_r v7

AFNI + R container (base: Ubuntu) with brms and cmdstanr for RBA Bayesian Multilevel Modeling

  • version: 1.8.2
Latest release: almost 2 years ago - 56 downloads - 2,200 dependencies
koki/delayedtensor-experiments 20230818

  • version: 1.8.2
Latest release: over 1 year ago - 57 downloads - 1,295 dependencies
micko920/fiji-calc shiny

  • version: 1.8.1
Latest release: about 3 years ago - 45 downloads - 1,239 dependencies
gesiscss/binder-timtrice-2dhurricane-5fharvey-5fprelims-66dd1c 3affac115dd66d30a85c2146b06d426c1e1d6d4e

  • version: 1.7.1
Latest release: almost 5 years ago - 42 downloads - 1,184 dependencies
afcai2c/r-studio-valex latest

  • version: 1.8.1
Latest release: over 3 years ago - 42 downloads - 1,654 dependencies
gesiscss/binder-zambujo-2dnrpmap-e87036 4f52de0704bf278671ddbffa725c6c2124b71702

  • version: 1.7.1
Latest release: almost 5 years ago - 41 downloads - 1,190 dependencies