phenomedb/phenomedb-api-npc latest

koki/guidedpls-experiments 20230502

tomasgomes/nextflow_kallisto_sc 0.3

cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

timothystephens/genotype_samples 0.0.1

adfncgr/mpr-genotyping latest

trust1/jmml latest

JMML classifier

bianca7/clusterprofiler latest

suimye/cage_box latest

skchronicles/flair v0.1.0

Docker image for FLAIR: Full-Length Alternative Isoform analysis of RNA

fgualdr/env_motifs latest

kuangda/pc12 latest

bigomics/omicsplayground master

Self-service analytics for big omics data

scao/microsec 0.0.1

abelean/seurat_desctools 4.1.0

bigomics/omicsplayground-base ub2204_v2

johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

jesusgf23/allenseurat latest

datashield/rock-dolomite-xenon latest

cmccornack/crmsc latest

ilariap/r_cnmops_exomedepth latest

Docker container containing panel-cnMops, cnMops and Exomedepth

btrspg/genekitr latest

omicschef/rnaseqchef v1.0.9

RNAseqChef, an RNA-seq data controller highlighting gene expression features

commander121/rmarkdown latest

cjchen/tbtoolszone 2.0

fallingstar10/hbsigrocker latest

sviatsidorov/r_processor 0.4

Analysis of alternative isoforms of human TFs in R

sgiamberardinorti/dge_analysis 202304171546_x86_64

cjchen/scauclass_2023 1.0

shengqh/cqs_smallrnaseq latest

njjai/scrattch_mapping 0.52.2

lroser/databricksbio latest

tariship/dev_sync_directories latest

nciccbr/ccbr_r_4.3.0 v1

sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

jpdodson/dsrna_docker latest

nathanprovin/cellcom 1.2.2

jafoltz/sc_python 8

almurphy/mungesumstats latest

dhspence/docker-rstudio-python latest

indraniel/chip-pipeline-annotation v1

stefanucciluca/tregopathies latest

etycksen/sc_deluxe 0.2

gyusikhwang/tgs v1

mshriver01/share_task_archr latest

mknudson/share_task_cell_annotation mei-cell-annotation

brusconi/seurat latest

omicschef/epigenomechef v1.1.3

nfancy/scflow dev

fluentin55/singlecell_docker 1.2

alexthiery/archr_seurat_signac_mega 3.2

andrewsg/archr macs2

wyangwu/r4.1.2 latest

bioxfu/xseurat2 latest

robertplayer/scidap-genelists v3.0.0

gevrony/hidef-seq 1.2

chunjiesamliu/scmocha latest

srynobio/rna latest

giusmar/quarto 1.3.433d

scwatts/bolt_gpgr 0.1.0

mfilipuz/r_v423 23.05.09

fgualdr/env_norm_gr_idr latest

yosuketanigawa/rstudio_yt latest

bianca7/deseq2 latest

repbioinfo/transformgampoi latest

bioedge/edge_24_1_ubuntu18 20231115

skchronicles/genome-seek_trim_map latest

Official docker image for trimming and alignment with genome-seek

qdidiscoveryservices/diffbind latest

digitalproteomes/mh_class 2023

jackiezhuqi/bio-rstudio latest

papaemmelab/allspice-allcatchr v0.1.0

winuthayanon/rstudio RS4.3.1BM3.17

singha53/modc v0.1

btrspg/vscode-dkd-env latest

imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

gaspardr/r-env v1.2

My R environment for analyses and development

zjnolen/angsd-snakemake-pipeline 0.1

ycli1995/bioinfo_dev 1.0.1

arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

alexdhill/complete-seq latest

dongminshin/sc_ppl 1.65

koji11235/rnaseq_env latest

sheddn/singlecell latest

omicsclass/pan-genome v1.0

etretiakov/rocker-session latest

phenomedb/phenomedb-airflow latest

kazukinakamae/dangeranalysis 1.1

Instruction is here: https://github.com/KazukiNakamae/DANGER_analysis

alexsickler/toolkit_subtyping v2.0

akialbz/ptox rstudio

qxes4210/mimseq double_result_page

This repo is for the mimseq web tool (tRNA analysis)

mfsentma/atacseq latest

andrewrrelmore/genepi_vscode test

skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

cerebis/squeezemeta latest

bianca7/mompreprocess latest

vidhyagnanasekaran/rocker-single-cell v1