Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : GenomicFeatures
Explore the latest package usage data for GenomicFeatures in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 204
Total downloads: 178,142
More details on packages.ecosyste.ms - JSON
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 1.50.2
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 1.38.2
mirekphd/ml-cpu-r36-rs-cust latest
- version: 1.30.0
mirekphd/ml-cpu-r36-base latest
- version: 1.30.0
biocontainers/isee-galaxy v3.13_cv1.0.0
- version: 1.45.0
nfcore/nanoseq dev
Nanopore demultiplexing, QC and alignment pipeline
- version: 1.42.0
nfcore/scrnaseq dev
A Docker Container for the nf-core/scrnaseq pipeline.
- version: 1.38.0
mirekphd/ml-cpu-r35-rs 20190201
- version: 1.30.0
dhspence/docker-sicer latest
- version: 1.32.0
dhspence/docker-basestation latest
- version: 1.32.0
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 1.40.0
dhspence/docker-dss latest
- version: 1.38.2
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1
- version: 1.26.2
biocontainers/bioconductor-variantannotation v1.20.2-1b1-deb_cv1
- version: 1.26.2
biocontainers/bioconductor-ensembldb v1.6.2-1-deb_cv1
- version: 1.26.2
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1
- version: 1.26.2
koki/sctensor-experiments 20220208
- version: 1.46.4
koki/biocdev 20230818
- version: 1.53.1
anand7899/rmarkdown latest
- version: 1.50.2
hoonbiolab/hmftools v1.1
- version: 1.44.0
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1
- version: 1.26.2
chgyi/bio 3.5.1
- version: 1.32.2
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1
- version: 1.26.2
dhspence/docker-manta 1.5.0
- version: 1.32.0
dhspence/docker-hiccompare latest
- version: 1.38.2
kcapd/wings-genomics latest
WINGS workflow system with software for genomics operations.
- version: 1.26.4
mirekphd/ml-cpu-r35-rdp 20180918
- version: 1.32.2
crukmi/mesa main
- version: 1.49.7
testalabgh/downstream signac-1.4.0
- version: 1.46.5
koki/annotationhub 20210323
- version: 1.42.2
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520
- version: 1.38.0
lorentzb/gene8940_r 1.0
- version: 1.50.2
dhspence/docker-vep 93
- version: 1.32.0
doejgi/trinityrnaseq-wdl 2.11.0b
- version: 1.38.2, 1.50.2
maestsi/nf-m6anet v1
- version: 1.42.3
khoulaha/jabba v1.0.0
- version: 1.50.2
koki/tensor-projects-machima 20220827
- version: 1.48.3
hoonbiolab/pepatac v1.1
- version: 1.44.0
crukmi/mesa_dependencies latest
- version: 1.50.4
broadcptacdev/panoply_so_nmf_report 9bb503e
- version: 1.38.2
trust1/rbox v1
Methylation array work toolbox
- version: 1.42.1
dmiller15/minfi 4.2.0
- version: 1.48.1
kcapd/wings-genomics-full latest
- version: 1.26.4
mirekphd/ml-cpu-r36-rs 20200131
- version: 1.30.0
hoonbiolab/variantannotation_r v1.1
- version: 1.38.2
mattjmeier/r-odaf-hc-prod latest
- version: 1.50.2
koki/velocytor 20221015
- version: 1.48.4
koki/workflow 20210327
- version: 1.42.2
jpsmith5/peppro latest
- version: 1.50.2
alanocallaghan/high-dimensional-stats-r latest
- version: 1.51.2
sagnikbanerjee15/ngpint 1.0.0
- version: 1.47.2
hoonbiolab/titan v1.1
- version: 1.38.2
haileyzhang/lfq-analyst v1.2.6
A docker container for LFQ-Analyst
- version: 1.50.4
keithgraham5/cnvrobot_v4_2 latest
- version: 1.38.0
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 1.52.1
biodancer/nasap_performance latest
write later
- version: 1.46.3
mbaardwijk/hmftools latest
- version: 1.46.1
haileyzhang/fragpipe-analyst v0.23
A Docker container of Fragpipe-Analyst
- version: 1.50.4
yiluxiangbei/pumpkin-genomealign-notebook 1.0
- version: 1.46.1
yiluxiangbei/pumpkin-gene-genomealign 20220216
- version: 1.46.1
gnwanne/decontx latest
- version: 1.50.3
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest
- version: 1.38.2
skoyamamd/scoreinvhap latest
- version: 1.46.5
dhspence/docker-wg-basestation latest
- version: 1.38.2
lemoniada/test pipeline
- version: 1.50.3
qdidiscoveryservices/sc_pip_r_and_py latest
- version: 1.42.1
intelliseqngs/bioconductor r-coverage-stats_v0.1
- version: 1.38.0
kisudsoe/r-base latest
- version: 1.50.4
haileyzhang/phospho-analyst v1.0.1
- version: 1.50.4
broadcptacdev/activedriver latest
- version: 1.38.2
mtorresm55/r_env_4_1_0 v1.0
- version: 1.46.1
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 1.50.2
bioconductor/ismb.osca 124cbc0
- version: 1.52.1
jpsmith5/rpipe 0.3.1
- version: 1.50.2
qdidiscoveryservices/seurat_tidyverse latest
- version: 1.42.1
alexthiery/archr 3.1
- version: 1.46.5
abelean/seurat_azimuth 5b
- version: 1.46.5
markataylor/r_yufree v1.0.0
- version: 1.50.2
sparktx/gviz 1.40.1
- version: 1.48.4
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest
- version: 1.38.1
edkang0925/diffutr latest
- version: 1.50.4
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 1.50.4, 1.52.2
mattjmeier/r-odaf-hc-base latest
- version: 1.50.2
philipp02/pathway v1
- version: 1.51.2
stormgod/deepmaps-cpu latest
- version: 1.50.4
sameetmehta/docker_report_apptainer devel
- version: 1.52.0
am5747/methylation latest
- version: 1.50.4
weishwu/planet 12052022
- version: 1.48.4
apollodorus/polyglot v1
- version: 1.50.2
hoonbiolab/hmftools_purple v3.7.2
- version: 1.50.3
hoonbiolab/hmftools_snv v3.2.2
- version: 1.50.3
breezykermo/gvis latest
- version: 1.38.2
hoonbiolab/testbattenberg v1.0
- version: 1.38.2
almahmoud/terra-jupyter bioc
- version: 1.48.4
kdgosik/main-gitpod latest
- version: 1.50.4
weishwu/chipseeker 1.34.1
- version: 1.50.4