Ecosyste.ms: Docker

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Package Usage : cran : GenomicAlignments

Explore the latest package usage data for GenomicAlignments in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 344
Total downloads: 1,463,883

More details on packages.ecosyste.ms - JSON

prismcmap/base-clue-pseq latest

  • version: 1.26.0
Latest release: almost 3 years ago - 18 downloads - 318 dependencies
yiluxiangbei/pumpkin-gene-genomealign 20220216

  • version: 1.30.0
Latest release: almost 3 years ago - 14 downloads - 2,116 dependencies
gnwanne/decontx latest

  • version: 1.34.0
Latest release: almost 2 years ago - 18 downloads - 938 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 1.22.1
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
skoyamamd/scoreinvhap latest

  • version: 1.30.0
Latest release: over 2 years ago - 14 downloads - 662 dependencies
dhspence/docker-wg-basestation latest

  • version: 1.22.1
Latest release: about 4 years ago - 13 downloads - 1,126 dependencies
chgyi/trinity 2.8.4

  • version: 1.14.1
Latest release: over 5 years ago - 13 downloads - 795 dependencies
lemoniada/test pipeline

  • version: 1.34.0
Latest release: almost 2 years ago - 13 downloads - 1,181 dependencies
hoonbiolab/chromothripsis v1.0

  • version: 1.30.0
Latest release: almost 3 years ago - 14 downloads - 505 dependencies
luisas/rannotation_forcats latest

  • version: 1.22.1
Latest release: about 4 years ago - 12 downloads - 89 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 1.26.0
Latest release: almost 4 years ago - 12 downloads - 1,097 dependencies
intelliseqngs/bioconductor r-coverage-stats_v0.1

  • version: 1.22.0
Latest release: almost 5 years ago - 13 downloads - 185 dependencies
kisudsoe/r-base latest

  • version: 1.34.1
Latest release: over 1 year ago - 83 downloads - 1,107 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 1.36.0
Latest release: over 1 year ago - 60 downloads - 571 dependencies
haileyzhang/phospho-analyst v1.0.1

  • version: 1.34.1
Latest release: about 1 year ago - 50 downloads - 796 dependencies
broadcptacdev/activedriver latest

  • version: 1.22.1
Latest release: over 1 year ago - 27 downloads - 720 dependencies
mtorresm55/r_env_4_1_0 v1.0

  • version: 1.30.0
Latest release: almost 2 years ago - 14 downloads - 354 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 1.34.0
Latest release: almost 2 years ago - 13 downloads - 598 dependencies
luisas/r_sc.simg latest

  • version: 1.22.1
Latest release: about 4 years ago - 12 downloads - 260 dependencies
crpeters/r-methylkit 4.2.1

  • version: 1.34.0
Latest release: almost 2 years ago - 12 downloads - 383 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 1.36.0
Latest release: over 1 year ago - 299 downloads - 1,422 dependencies
gesiscss/binder-mortonjt-2dq2stats-2dworkshops-912d21 82c8b562545acab37a854f097c33806fa7c2a4b3

  • version: 1.18.1
Latest release: over 3 years ago - 11 downloads - 1,679 dependencies
jpsmith5/rpipe 0.3.1

  • version: 1.34.0
Latest release: almost 2 years ago - 12 downloads - 262 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 1.26.0
Latest release: over 3 years ago - 12 downloads - 435 dependencies
alexthiery/archr 3.1

  • version: 1.30.0
Latest release: over 1 year ago - 133 downloads - 819 dependencies
hway/cellxgene_vip latest

  • version: 1.22.1
Latest release: almost 2 years ago - 13 downloads - 2,125 dependencies
gesiscss/binder-r2d-g5b5b759-fraunhofer-2ditmp-2dalister-26fdaf 11bce8bee1e1b0252d2ee5356a32b5b44c0dff4d

  • version: 1.22.0
Latest release: over 1 year ago - 31 downloads - 1,853 dependencies
abelean/seurat_azimuth 5b

  • version: 1.30.0
Latest release: over 1 year ago - 343 downloads - 1,141 dependencies
markataylor/r_yufree v1.0.0

  • version: 1.34.0
Latest release: almost 2 years ago - 14 downloads - 1,514 dependencies
sparktx/gviz 1.40.1

  • version: 1.32.1
Latest release: almost 2 years ago - 11 downloads - 288 dependencies
shiramaty/qiime2-sratools latest

  • version: 1.30.0
Latest release: almost 2 years ago - 11 downloads - 319 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 1.22.1
Latest release: about 4 years ago - 10 downloads - 431 dependencies
chriswyatt/genespaces latest

  • version: 1.30.0
Latest release: about 2 years ago - 11 downloads - 221 dependencies
edkang0925/diffutr latest

  • version: 1.34.0
Latest release: almost 2 years ago - 14 downloads - 532 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.36.0, 1.34.0
Latest release: about 1 year ago - 33 downloads - 1,150 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 1.34.0
Latest release: almost 2 years ago - 10 downloads - 598 dependencies
philipp02/pathway v1

  • version: 1.35.0
Latest release: almost 2 years ago - 10 downloads - 345 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.34.1
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.36.0
Latest release: over 1 year ago - 9 downloads - 352 dependencies
am5747/methylation latest

  • version: 1.34.0
Latest release: almost 2 years ago - 10 downloads - 290 dependencies
weishwu/planet 12052022

  • version: 1.32.1
Latest release: almost 2 years ago - 9 downloads - 341 dependencies
apollodorus/polyglot v1

  • version: 1.34.0
Latest release: almost 2 years ago - 10 downloads - 428 dependencies
qdidiscoveryservices/pseudobulk 1.1

  • version: 1.26.0
Latest release: over 2 years ago - 10 downloads - 1,112 dependencies
weishwu/nanomethphase 1.2.0

  • version: 1.24.0
Latest release: almost 2 years ago - 31 downloads - 1,274 dependencies
gpato/lacen-app 2.4.0

  • version: 1.30.0
Latest release: 12 months ago - 58 downloads - 801 dependencies
hoonbiolab/hmftools_purple v3.7.2

  • version: 1.34.0
Latest release: almost 2 years ago - 12 downloads - 270 dependencies
hoonbiolab/hmftools_snv v3.2.2

  • version: 1.34.0
Latest release: almost 2 years ago - 11 downloads - 271 dependencies
breezykermo/gvis latest

  • version: 1.22.1
Latest release: over 4 years ago - 9 downloads - 1,619 dependencies
hoonbiolab/testbattenberg v1.0

  • version: 1.22.1
Latest release: almost 2 years ago - 11 downloads - 325 dependencies
elynrfw/gerald-test latest

  • version: 1.34.0
Latest release: almost 2 years ago - 10 downloads - 349 dependencies
sebimer/samba-v4-qiime2 2022.11

  • version: 1.34.0
Latest release: almost 2 years ago - 49 downloads - 583 dependencies
almahmoud/terra-jupyter bioc

  • version: 1.32.1
Latest release: about 2 years ago - 9 downloads - 2,217 dependencies
kdgosik/main-gitpod latest

  • version: 1.34.1
Latest release: over 1 year ago - 49 downloads - 1,820 dependencies
emersonchao/dsc180b latest

  • version: 1.34.0
Latest release: almost 2 years ago - 50 downloads - 2,266 dependencies
jieliu4wustl/wustl v0.1_20230907

  • version: 1.22.1, 1.34.0
Latest release: about 1 year ago - 4,483 downloads - 1,124 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 1.34.0
Latest release: almost 2 years ago - 8 downloads - 1,935 dependencies
gmillot/immcantation_v1.1 gitlab_v10.0

  • version: 1.26.0
Latest release: over 1 year ago - 13 downloads - 1,438 dependencies
aokad/recount3 1.8.0

  • version: 1.34.0
Latest release: almost 2 years ago - 9 downloads - 121 dependencies
chaunceyzhou/awesome_rnaseq v1.3

  • version: 1.22.1
Latest release: about 1 year ago - 16 downloads - 465 dependencies
weishwu/chipseeker 1.34.1

  • version: 1.34.1
Latest release: over 1 year ago - 34 downloads - 423 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 1.32.1
Latest release: almost 2 years ago - 25 downloads - 953 dependencies
duclare123/vizcnv_dev latest

Visualization tool for WGS analysis

  • version: 1.34.1
Latest release: over 1 year ago - 15 downloads - 920 dependencies
gmillot/r_v4.1.2_ig_clustering_v1.1 gitlab_v9.7

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.7

  • version: 1.30.0
Latest release: almost 2 years ago - 24 downloads - 927 dependencies
jwcarlson/genespace latest

  • version: 1.36.0
Latest release: over 1 year ago - 46 downloads - 212 dependencies
fauzul/fuseq_wes_hg19 1.0

  • version: 1.30.0
Latest release: over 1 year ago - 9 downloads - 126 dependencies
gesiscss/binder-ngs-2ddocs-2d2018-2dggg201a-e01a75 18ae0fd4cd73f6d612f276af6afe6fdd663e2724

  • version: 1.22.1
Latest release: almost 5 years ago - 8 downloads - 1,554 dependencies
shashankti/bioc_docker v1

  • version: 1.35.0
Latest release: almost 2 years ago - 7 downloads - 1,350 dependencies
zwcdocker/seurat latest

  • version: 1.28.0
Latest release: almost 2 years ago - 7 downloads - 655 dependencies
hoonbiolab/clustersv v1.1

  • version: 1.22.1
Latest release: over 2 years ago - 10 downloads - 718 dependencies
xjezzuuuu/setinfo-unibit-jupyter latest

  • version: 1.22.1
Latest release: almost 2 years ago - 8 downloads - 2,010 dependencies
kxk302/g4hunter 1.0.0

  • version: 1.34.1
Latest release: almost 2 years ago - 20 downloads - 505 dependencies
hoonbiolab/hmftools_linx v1.23.1

  • version: 1.34.0
Latest release: almost 2 years ago - 10 downloads - 988 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 1.22.1
Latest release: almost 5 years ago - 8 downloads - 2,128 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.32.1
Latest release: over 1 year ago - 75 downloads - 512 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.34.1
Latest release: over 1 year ago - 15 downloads - 1,562 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 1.34.0
Latest release: over 1 year ago - 8 downloads - 1,038 dependencies
yinxiu/variantalker v2.0

NextFlow pipeline to functionally annotate DNA variants in VCF files

  • version: 1.34.1, 1.36.0
Latest release: over 1 year ago - 119 downloads - 1,068 dependencies
srynobio/diagnostic_rnaseq latest

  • version: 1.36.0
Latest release: over 1 year ago - 108 downloads - 1,441 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.34.0
Latest release: almost 2 years ago - 8 downloads - 1,604 dependencies
hoonbiolab/hmftools_cnv v3.8.4

  • version: 1.34.0, 1.36.0
Latest release: over 1 year ago - 13 downloads - 985 dependencies
kumalpha/qiime2-core latest

  • version: 1.26.0
Latest release: almost 2 years ago - 10 downloads - 420 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 1.30.0
Latest release: over 1 year ago - 8 downloads - 1,347 dependencies
ntobias85/abe_repo degust_build

  • version: 1.35.0, 1.20.1
Latest release: over 1 year ago - 6 downloads - 1,339 dependencies
madhu99/sb6 latest

  • version: 1.34.0
Latest release: almost 2 years ago - 7 downloads - 666 dependencies
hoonbiolab/hmftools_sv v.2.13.2

  • version: 1.34.0
Latest release: almost 2 years ago - 9 downloads - 856 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.30.0
Latest release: over 1 year ago - 38 downloads - 2,387 dependencies
jmonlong/terra-rstudio-custom 0.0.1

  • version: 1.34.0
Latest release: almost 2 years ago - 7 downloads - 1,616 dependencies
shl198/rna_ppl latest

  • version: 1.32.0
Latest release: almost 2 years ago - 20 downloads - 2,099 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.34.1
Latest release: over 1 year ago - 35 downloads - 1,720 dependencies
mdivr/chicago v2

  • version: 1.34.1
Latest release: over 1 year ago - 29 downloads - 645 dependencies
firriver/crvs latest

  • version: 1.30.0
Latest release: over 1 year ago - 8 downloads - 1,490 dependencies