Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : DelayedArray
Explore the latest package usage data for DelayedArray in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 545
Total downloads: 2,514,676
More details on packages.ecosyste.ms - JSON
veupathdb/rserve 7
- version: 0.24.0
ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 0.24.0, 0.20.0
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30
- version: 0.4.1
nfcore/methylseq dev
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.
- version: 0.18.0
ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30
- version: 0.4.1
nfcore/atacseq latest
A Docker container for the nf-core/atacseq pipeline.
- version: 0.12.0
nfcore/chipseq dev
A docker image for nf-core/chipseq
- version: 0.14.0
nfcore/eager 2.5.0
A Docker image for the nf-core/eager pipeline.
- version: 0.16.3
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 0.26.6
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 0.12.3
mirekphd/ml-cpu-r36-rs-cust latest
- version: 0.4.1
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
nfcore/ampliseq dev
A Docker image for nf-core/ampliseq.
- version: 0.8.0
mirekphd/ml-cpu-r36-base latest
- version: 0.4.1
biocontainers/isee-galaxy v3.13_cv1.0.0
- version: 0.19.1
ccdlstaging/dr_smasher 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
ccdlstaging/dr_illumina 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
patroonorg/patroondeps latest
- version: 0.24.0
dhspence/docker-biscuit latest
- version: 0.6.6
ccdlstaging/dr_compendia 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
nfcore/airrflowreport dev
- version: 0.24.0
nfcore/circrna dev
Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.
- version: 0.12.0
nfcore/sarek 2.7.2
A Docker container for the nf-core/sarek pipeline
- version: 0.16.3
nfcore/slamseq dev
A docker image for nf-core/slamseq
- version: 0.8.0
nfcore/hic dev
A docker container for the nf-core/hic pipeline.
- version: 0.14.0
nfcore/nanoseq dev
Nanopore demultiplexing, QC and alignment pipeline
- version: 0.16.0
nfcore/scrnaseq dev
A Docker Container for the nf-core/scrnaseq pipeline.
- version: 0.12.0
mirekphd/ml-cpu-r35-rs 20190201
- version: 0.6.6
dhspence/docker-homer latest
docker with chip-seq tool homer
- version: 0.6.6
nfcore/exoseq dev
A docker container for the ExoSeq pipeline
- version: 0.6.6
nfcore/lncpipe dev
A Docker image for nf-core/lncpipe
- version: 0.6.6
seglh/exomedepth f4716ad
- version: 0.22.0
veitveit/vsclust release-1.2.1
For more details, see https://bitbucket.org/veitveit/vsclust
- version: 0.24.0
dhspence/docker-sicer latest
- version: 0.6.1
qdidiscoveryservices/limma-voom 4.2.0
- version: 0.22.0
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2
- version: 0.20.0
dhspence/docker-basestation latest
- version: 0.6.1
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 0.14.0
dhspence/docker-dss latest
- version: 0.12.2
tercen/runtime-flowsuite 3.15-4
- version: 0.22.0
cimendes/splicing-pipelines-nf 3.1.ubuntu
- version: 0.18.0
koki/sctensor-experiments 20220208
- version: 0.20.0
evolbioinfo/deseq2 v1.28.1
- version: 0.14.1
qdidiscoveryservices/scrna_downstream 1.1
- version: 0.18.0
recetox/ramclustr 1.1.0-recetox0
- version: 0.14.1
koki/biocdev 20230818
- version: 0.27.10
anand7899/rmarkdown latest
- version: 0.24.0
prismcmap/sushi develop
- version: 0.16.3
hoonbiolab/hmftools v1.1
- version: 0.18.0
qdidiscoveryservices/bam_to_10x_counts latest
- version: 0.20.0
chgyi/bio 3.5.1
- version: 0.6.5
canaantt/notitia-ocpu latest
This is part of zager/notitia.
- version: 0.4.1
chgyi/metaware_rna_denovo latest
- version: 0.8.0
dhspence/docker-manta 1.5.0
- version: 0.6.1
dhspence/docker-hiccompare latest
- version: 0.12.2
koki/sctensor-workshop sha-fa8c4cf
- version: 0.19.4
atttilacs/dsp_geomxtools latest
- version: 0.20.0
atttilacs/seurat_big latest
- version: 0.20.0
mirekphd/ml-cpu-r35-rdp 20180918
- version: 0.6.6
jafoltz/scclassify latest
- version: 0.20.0
crukmi/mesa main
- version: 0.23.2
testalabgh/downstream signac-1.4.0
- version: 0.20.0
atttilacs/dsp_giotto latest
- version: 0.20.0
mlepetit/ranalysis 3.3.4
- version: 0.18.0
tercen/flowsuite 0.0.4
- version: 0.16.3
dolphinnext/ont_variant_calling 1.0
- version: 0.24.0
scgfacility/rstudio-course22 v0.11
image used to run the course 2022
- version: 0.24.0
hdsu/etbii2023 latest
- version: 0.20.0
qdidiscoveryservices/quantiseqr v1
- version: 0.21.2
ccdlstaging/dr_common_tests 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.4.1
tercen/flowsom_operator 1.6.0
- version: 0.22.0
intelliseqngs/task_bam-exon-depth 1.0.4
- version: 0.12.3
koki/annotationhub 20210323
- version: 0.16.2
qdidiscoveryservices/ssgsea 1.0
- version: 0.24.0
millerh1/ste v1.0
- version: 0.24.0
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520
- version: 0.12.2
tipsarin/rstudio 4.1.3viraltrack
- version: 0.20.0
lorentzb/gene8940_r 1.0
- version: 0.24.0
dhspence/docker-vep 93
- version: 0.6.1
qdidiscoveryservices/bam_to_10x_counts_pandoc latest
- version: 0.20.0
doejgi/trinityrnaseq-wdl 2.11.0b
- version: 0.24.0, 0.12.2
maestsi/nf-m6anet v1
- version: 0.16.3
koki/delayedtensor-experiments 20230818
- version: 0.27.10