Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : BiocNeighbors

Explore the latest package usage data for BiocNeighbors in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 117
Total downloads: 118,848

More details on packages.ecosyste.ms - JSON

broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.16.0
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.11.0
Latest release: about 3 years ago - 3,660 downloads - 1,218 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.12.0
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.6.0
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
tercen/runtime-flowsuite 3.15-4

  • version: 1.14.0
Latest release: about 2 years ago - 353 downloads - 1,641 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 1.10.0
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
jafoltz/scclassify latest

  • version: 1.12.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
testalabgh/downstream signac-1.4.0

  • version: 1.12.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 1.16.0
Latest release: almost 2 years ago - 75 downloads - 382 dependencies
tercen/debarcoding_cytof_operator 0.3.0

  • version: 1.14.0
Latest release: over 1 year ago - 109 downloads - 1,659 dependencies
koki/tensor-projects-machima 20220827

  • version: 1.14.0
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
mbwali/jupyterlab qiime2023

  • version: 1.16.0
Latest release: over 1 year ago - 56 downloads - 1,941 dependencies
koki/urchin_workflow_seurat 20230616

  • version: 1.16.0
Latest release: over 1 year ago - 63 downloads - 1,471 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 1.16.0
Latest release: almost 2 years ago - 34 downloads - 699 dependencies
koki/velocytor 20221015

  • version: 1.14.0
Latest release: about 2 years ago - 39 downloads - 1,452 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.17.1
Latest release: almost 2 years ago - 91 downloads - 1,601 dependencies
porchard/decontx 20230104

  • version: 1.16.0
Latest release: almost 2 years ago - 28 downloads - 830 dependencies
tercen/compensate_cytof_operator 0.0.7

  • version: 1.14.0
Latest release: almost 2 years ago - 30 downloads - 1,643 dependencies
tercen/automated_gating_operator 1.0.0

  • version: 1.14.0
Latest release: about 1 year ago - 69 downloads - 655 dependencies
mlepetit/rnormalisation 1.0

  • version: 1.10.0
Latest release: almost 2 years ago - 33 downloads - 2,142 dependencies
koki/bindsc 20220609

  • version: 1.14.0
Latest release: over 2 years ago - 22 downloads - 2,060 dependencies
luisas/rde latest

  • version: 1.4.2
Latest release: almost 4 years ago - 20 downloads - 549 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 1.18.0
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
luisas/r_sc latest

  • version: 1.4.2
Latest release: about 4 years ago - 18 downloads - 536 dependencies
shl198/sc_ppl 202306

  • version: 1.18.0
Latest release: over 1 year ago - 52 downloads - 2,005 dependencies
gongx030/ensemblemerge 2.1.24

Docker image for running ensemblemerge package.

  • version: 1.16.0
Latest release: almost 2 years ago - 18 downloads - 546 dependencies
gnwanne/decontx latest

  • version: 1.16.0
Latest release: almost 2 years ago - 18 downloads - 938 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 1.4.2
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 1.8.2
Latest release: almost 4 years ago - 12 downloads - 1,097 dependencies
luisas/r_sc.simg latest

  • version: 1.4.2
Latest release: about 4 years ago - 12 downloads - 260 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 1.18.0
Latest release: over 1 year ago - 299 downloads - 1,422 dependencies
njjtemp/scrattch-mapping 2.9

  • version: 1.8.2, 1.16.0
Latest release: over 1 year ago - 315 downloads - 850 dependencies
njjai/genebasis latest

  • version: 1.16.0
Latest release: over 1 year ago - 28 downloads - 789 dependencies
abelean/seurat_azimuth 5b

  • version: 1.12.0
Latest release: over 1 year ago - 343 downloads - 1,141 dependencies
denglab/vpfkit_base latest

  • version: 1.16.0
Latest release: over 1 year ago - 13 downloads - 1,089 dependencies
tercen/normalise_cytof_operator latest

  • version: 1.14.0
Latest release: about 2 years ago - 12 downloads - 655 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.16.0
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
alleninst/arrow_scrattch_hmapping_on_hpc latest

  • version: 1.12.0
Latest release: over 1 year ago - 24 downloads - 1,556 dependencies
apollodorus/polyglot v1

  • version: 1.16.0
Latest release: almost 2 years ago - 10 downloads - 428 dependencies
ucigenomics/cellchatnotebook 1.5.0

  • version: 1.16.0
Latest release: almost 2 years ago - 11 downloads - 1,564 dependencies
crukmi/liana 0.1.9

  • version: 1.16.0
Latest release: almost 2 years ago - 18 downloads - 287 dependencies
elynrfw/gerald-test latest

  • version: 1.16.0
Latest release: almost 2 years ago - 10 downloads - 349 dependencies
sebimer/samba-v4-qiime2 2022.11

  • version: 1.16.0
Latest release: almost 2 years ago - 49 downloads - 583 dependencies
almahmoud/terra-jupyter bioc

  • version: 1.14.0
Latest release: almost 2 years ago - 9 downloads - 2,217 dependencies
felixschlesinger/assign_types v0.2

  • version: 1.12.0
Latest release: over 1 year ago - 240 downloads - 503 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 1.8.2
Latest release: almost 2 years ago - 8 downloads - 406 dependencies
emersonchao/dsc180b latest

  • version: 1.16.0
Latest release: almost 2 years ago - 50 downloads - 2,266 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 1.16.0
Latest release: almost 2 years ago - 8 downloads - 1,935 dependencies
brianyee/r-essentials 1.0.0

  • version: 1.12.0
Latest release: over 1 year ago - 8 downloads - 1,682 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 1.18.0
Latest release: about 1 year ago - 60 downloads - 529 dependencies
crukmi/liana_tensor 0.1.9

  • version: 1.16.0
Latest release: almost 2 years ago - 9 downloads - 467 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.16.0
Latest release: almost 2 years ago - 8 downloads - 1,031 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.16.0
Latest release: over 1 year ago - 15 downloads - 1,562 dependencies
fabianegli/scp-recommendations-2022 1.0

  • version: 1.16.0
Latest release: over 1 year ago - 12 downloads - 1,328 dependencies
bicore/scrattch_mapping 0.51

  • version: 1.16.0
Latest release: about 1 year ago - 573 downloads - 832 dependencies
crukmi/nas-app latest

  • version: 1.8.2
Latest release: almost 2 years ago - 11 downloads - 701 dependencies
crukmi/liana_tensor2 0.1.9

  • version: 1.16.0
Latest release: almost 2 years ago - 9 downloads - 684 dependencies
madhu99/sb6 latest

  • version: 1.16.0
Latest release: almost 2 years ago - 7 downloads - 666 dependencies
ucigenomics/spatiallibd latest

  • version: 1.16.0
Latest release: almost 2 years ago - 17 downloads - 2,006 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.16.0
Latest release: over 1 year ago - 11 downloads - 3,115 dependencies
wlc27/dcanr v1

  • version: 1.16.0
Latest release: almost 2 years ago - 10 downloads - 1,681 dependencies
winuthayanon/seurat 4.3.0

  • version: 1.16.0
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.19.0
Latest release: over 1 year ago - 9 downloads - 1,604 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 1.18.0
Latest release: about 1 year ago - 18 downloads - 1,422 dependencies
tercen/tercen-studio-flowsuite 3.15-6

  • version: 1.14.0
Latest release: over 1 year ago - 10 downloads - 1,885 dependencies
cwong23/stx_env latest

Environment for spatial pipeline

  • version: 1.16.0
Latest release: over 1 year ago - 9 downloads - 1,606 dependencies
buddej/scshc 0.1.0

  • version: 1.18.0
Latest release: over 1 year ago - 8 downloads - 950 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 1.18.0
Latest release: over 1 year ago - 5 downloads - 724 dependencies
kuangda/pc12 latest

  • version: 1.14.0
Latest release: almost 2 years ago - 6 downloads - 1,326 dependencies
bigomics/omicsplayground master

Self-service analytics for big omics data

  • version: 1.12.0
Latest release: 12 months ago - 9,749 downloads - 1,551 dependencies
abelean/seurat_desctools 4.1.0

  • version: 1.12.0
Latest release: almost 2 years ago - 605 downloads - 1,090 dependencies
bigomics/omicsplayground-base ub2204_v2

  • version: 1.12.0
Latest release: about 1 year ago - 1,389 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 1.10.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
cmccornack/crmsc latest

  • version: 1.12.0
Latest release: over 1 year ago - 289 downloads - 1,476 dependencies
andrewatmp/testf latest

  • version: 1.16.0
Latest release: over 1 year ago - 316 downloads - 536 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 1.8.2
Latest release: over 1 year ago - 156 downloads - 1,173 dependencies
bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

  • version: 1.16.0
Latest release: over 1 year ago - 134 downloads - 752 dependencies
njjai/scrattch_mapping 0.52.2

  • version: 1.16.0
Latest release: 10 months ago - 436 downloads - 867 dependencies
weizhoujp/rchtc 4.3.0

  • version: 1.18.0
Latest release: over 1 year ago - 141 downloads - 738 dependencies
tariship/dev_sync_directories latest

  • version: 1.16.0
Latest release: about 1 year ago - 112 downloads - 421 dependencies
nathanprovin/cellcom 1.2.2

  • version: 1.18.0
Latest release: over 1 year ago - 82 downloads - 596 dependencies
jafoltz/sc_python 8

  • version: 1.12.0
Latest release: over 1 year ago - 63 downloads - 438 dependencies
andrewatmp/qiime_unzip latest

  • version: 1.16.0
Latest release: over 1 year ago - 93 downloads - 598 dependencies
etycksen/sc_deluxe 0.2

  • version: 1.16.0
Latest release: about 1 year ago - 249 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 1.12.0
Latest release: over 1 year ago - 50 downloads - 1,095 dependencies
brusconi/seurat latest

  • version: 1.18.0
Latest release: over 1 year ago - 67 downloads - 536 dependencies
biomehub/encodestatsbase 0.0.5

Basic docker image used as a base for EncodeStats.

  • version: 1.18.0
Latest release: about 1 year ago - 50 downloads - 853 dependencies
nfancy/scflow dev

  • version: 1.16.0
Latest release: over 1 year ago - 44 downloads - 778 dependencies
jlphillips/csci 2024-Spring

MTSU Department of Computer Science Stack

  • version: 1.16.0
Latest release: 11 months ago - 432 downloads - 3,721 dependencies
fluentin55/singlecell_docker 1.2

  • version: 1.16.0
Latest release: over 1 year ago - 40 downloads - 452 dependencies
jonasmrr/scrnaseq-pipeline latest

  • version: 1.16.0
Latest release: over 1 year ago - 35 downloads - 356 dependencies
wyangwu/r4.1.2 latest

  • version: 1.12.0
Latest release: over 1 year ago - 67 downloads - 827 dependencies
bioxfu/xseurat2 latest

  • version: 1.16.0
Latest release: almost 2 years ago - 36 downloads - 982 dependencies