Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : BiocIO

Explore the latest package usage data for BiocIO in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 238
Total downloads: 246,132

More details on packages.ecosyste.ms - JSON

fgualdr/env_norm_gr_idr latest

  • version: 1.8.0
Latest release: over 1 year ago - 29 downloads - 506 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 1.8.0
Latest release: over 1 year ago - 38 downloads - 2,089 dependencies
chiajungl/scrna 4.3.0-5.0

  • version: 1.10.0
Latest release: 11 months ago - 46 downloads - 1,312 dependencies
repbioinfo/transformgampoi latest

  • version: 1.4.0
Latest release: about 1 year ago - 28 downloads - 1,664 dependencies
skchronicles/genome-seek_trim_map latest

Official docker image for trimming and alignment with genome-seek

  • version: 1.8.0
Latest release: over 1 year ago - 36 downloads - 1,367 dependencies
qdidiscoveryservices/diffbind latest

  • version: 1.10.0
Latest release: over 1 year ago - 26 downloads - 526 dependencies
winuthayanon/rstudio RS4.3.1BM3.17

  • version: 1.10.0
Latest release: over 1 year ago - 29 downloads - 2,687 dependencies
singha53/modc v0.1

  • version: 1.4.0
Latest release: over 1 year ago - 25 downloads - 783 dependencies
rosadesa/freec 0.5

  • version: 1.4.0
Latest release: over 1 year ago - 28 downloads - 662 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 1.8.0
Latest release: over 1 year ago - 23 downloads - 1,568 dependencies
zjnolen/angsd-snakemake-pipeline 0.1

  • version: 1.4.0
Latest release: over 1 year ago - 22 downloads - 643 dependencies
ycli1995/bioinfo_dev 1.0.1

  • version: 1.10.0
Latest release: 11 months ago - 48 downloads - 4,337 dependencies
arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

  • version: 1.10.0
Latest release: about 1 year ago - 24 downloads - 1,444 dependencies
alexdhill/complete-seq latest

  • version: 1.10.0
Latest release: 9 months ago - 304 downloads - 584 dependencies
dongminshin/sc_ppl 1.65

  • version: 1.8.0
Latest release: 8 months ago - 121 downloads - 967 dependencies
etretiakov/rocker-session latest

  • version: 1.10.0
Latest release: over 1 year ago - 22 downloads - 2,565 dependencies
mfsentma/atacseq latest

  • version: 1.4.0
Latest release: over 1 year ago - 19 downloads - 852 dependencies
andrewrrelmore/genepi_vscode test

  • version: 1.8.0
Latest release: about 1 year ago - 19 downloads - 1,188 dependencies
skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

  • version: 1.8.0
Latest release: over 1 year ago - 79 downloads - 1,367 dependencies
kobedr/bismark_alignment_utils latest

  • version: 1.4.0
Latest release: about 1 year ago - 18 downloads - 596 dependencies
vidhyagnanasekaran/rocker-single-cell v1

  • version: 1.8.0
Latest release: almost 2 years ago - 18 downloads - 886 dependencies
igrisch/seuratharmony latest

  • version: 1.8.0
Latest release: over 1 year ago - 19 downloads - 931 dependencies
cgrlab/centos7_bfx 1.0.0

  • version: 1.8.0
Latest release: almost 2 years ago - 20 downloads - 1,457 dependencies
princessmaximacenter/gridss 2.13.2

  • version: 1.4.0
Latest release: about 1 year ago - 66 downloads - 801 dependencies
daemontus/software-cell-oracle latest

  • version: 1.10.0
Latest release: over 1 year ago - 15 downloads - 1,013 dependencies
joshuatobin257/drop latest

  • version: 1.10.0
Latest release: about 1 year ago - 15 downloads - 840 dependencies
neurogenomicslab/scavenge main

  • version: 1.9.1
Latest release: almost 2 years ago - 15 downloads - 1,305 dependencies
skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

  • version: 1.8.0
Latest release: over 1 year ago - 14 downloads - 1,722 dependencies
pl92297/sceqtl latest

  • version: 1.8.0
Latest release: over 1 year ago - 14 downloads - 930 dependencies
alexthiery/archr_macs2_seurat 3.0

  • version: 1.4.0
Latest release: over 1 year ago - 14 downloads - 801 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 1.8.0
Latest release: almost 2 years ago - 14 downloads - 2,271 dependencies
uvarc/rstudio tam5xe

  • version: 1.10.0
Latest release: about 1 year ago - 14 downloads - 1,062 dependencies
ajhodgkinson/mitogwas latest

  • version: 1.10.0
Latest release: about 1 year ago - 14 downloads - 1,094 dependencies
alfredshawn/wgbs_r 1.1

  • version: 1.4.0
Latest release: over 1 year ago - 14 downloads - 437 dependencies
fgualdr/env_gsea latest

  • version: 1.8.0
Latest release: over 1 year ago - 14 downloads - 566 dependencies
luslab/archr_dev latest

  • version: 1.10.0
Latest release: about 1 year ago - 13 downloads - 1,873 dependencies
bigdatainbiomedicine/inspect-r latest

  • version: 1.10.0
Latest release: about 1 year ago - 13 downloads - 643 dependencies
gm088/svm 030723

  • version: 1.10.0
Latest release: over 1 year ago - 13 downloads - 1,497 dependencies
alexdhill/vscode complete-seq

Multipurpose developer suite with VSCode base. Supports C++, python, R with notebooks.

  • version: 1.4.0
Latest release: over 1 year ago - 13 downloads - 1,510 dependencies
maxfieldkelsey/snakesenescence latest

image for use in snakemake

  • version: 1.4.0
Latest release: almost 2 years ago - 13 downloads - 494 dependencies
dovetailg/chicdiff latest

  • version: 1.8.0
Latest release: over 1 year ago - 13 downloads - 700 dependencies
cplaisier/ccafv2_extra latest

  • version: 1.8.0
Latest release: about 1 year ago - 13 downloads - 1,463 dependencies
alexthiery/archr_hicdc 3.0

  • version: 1.4.0
Latest release: over 1 year ago - 13 downloads - 822 dependencies
cmatkhan/llfs_rnaseq_latest latest

  • version: 1.6.0
Latest release: over 1 year ago - 13 downloads - 577 dependencies
rtibiocloud/neurogenomicslab_mungesumstats v1.7.10_6e16c82

  • version: 1.9.1
Latest release: about 1 year ago - 13 downloads - 1,293 dependencies
kuglerf/tft_r v5

  • version: 1.8.0
Latest release: about 1 year ago - 13 downloads - 812 dependencies
alexthiery/archr_dev_macs2 3.0

  • version: 1.4.0
Latest release: over 1 year ago - 12 downloads - 805 dependencies
costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

  • version: 1.11.0
Latest release: about 1 year ago - 12 downloads - 2,685 dependencies
brianyee/surf b77fd94

  • version: 1.4.0
Latest release: over 1 year ago - 12 downloads - 2,629 dependencies
forest2000/seuratv5 latest

Update Seurat to version 5

  • version: 1.8.0
Latest release: about 1 year ago - 12 downloads - 1,130 dependencies
abelean/seurat_deg 4.1.0

  • version: 1.4.0
Latest release: almost 2 years ago - 12 downloads - 1,083 dependencies
btrspg/r-env latest

  • version: 1.10.0
Latest release: over 1 year ago - 12 downloads - 2,231 dependencies