Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : BiocIO

Explore the latest package usage data for BiocIO in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 238
Total downloads: 246,132

More details on packages.ecosyste.ms - JSON

srynobio/diagnostic_rnaseq latest

  • version: 1.10.0
Latest release: over 1 year ago - 108 downloads - 1,441 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.8.0
Latest release: almost 2 years ago - 8 downloads - 1,604 dependencies
hoonbiolab/hmftools_cnv v3.8.4

  • version: 1.10.0, 1.8.0
Latest release: over 1 year ago - 13 downloads - 985 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 1.4.0
Latest release: over 1 year ago - 8 downloads - 1,347 dependencies
dabbleofdevops/r-datascience 4.2.2

  • version: 1.8.0
Latest release: over 1 year ago - 34 downloads - 816 dependencies
ntobias85/abe_repo degust_build

  • version: 1.9.1
Latest release: over 1 year ago - 6 downloads - 1,339 dependencies
madhu99/sb6 latest

  • version: 1.8.0
Latest release: almost 2 years ago - 7 downloads - 666 dependencies
hoonbiolab/hmftools_sv v.2.13.2

  • version: 1.8.0
Latest release: almost 2 years ago - 9 downloads - 856 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.4.0
Latest release: over 1 year ago - 38 downloads - 2,387 dependencies
jmonlong/terra-rstudio-custom 0.0.1

  • version: 1.8.0
Latest release: almost 2 years ago - 7 downloads - 1,616 dependencies
shl198/rna_ppl latest

  • version: 1.6.0
Latest release: almost 2 years ago - 20 downloads - 2,099 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.8.0
Latest release: over 1 year ago - 35 downloads - 1,720 dependencies
mdivr/chicago v2

  • version: 1.8.0
Latest release: over 1 year ago - 29 downloads - 645 dependencies
firriver/crvs latest

  • version: 1.4.0
Latest release: over 1 year ago - 8 downloads - 1,490 dependencies
mfsentma/rna latest

  • version: 1.4.0
Latest release: over 1 year ago - 7 downloads - 807 dependencies
ucigenomics/spatiallibd latest

  • version: 1.8.0
Latest release: almost 2 years ago - 17 downloads - 2,006 dependencies
samplix/droplet-viewer-internal latest

  • version: 1.2.0
Latest release: almost 2 years ago - 10 downloads - 568 dependencies
williamwu7/repac v.99

  • version: 1.8.0
Latest release: over 1 year ago - 12 downloads - 628 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.8.0
Latest release: over 1 year ago - 11 downloads - 3,115 dependencies
weishwu/diffbind 3.6.5

  • version: 1.6.0
Latest release: over 1 year ago - 10 downloads - 1,507 dependencies
wlc27/dcanr v1

  • version: 1.8.0
Latest release: almost 2 years ago - 10 downloads - 1,681 dependencies
chiajungl/seurat 4.3.0-5.0

  • version: 1.10.0
Latest release: 11 months ago - 17 downloads - 1,249 dependencies
qx658/eas-shiny latest

  • version: 1.8.0
Latest release: over 1 year ago - 10 downloads - 1,103 dependencies
fgualdr/env_perm_motifs latest

  • version: 1.8.0
Latest release: over 1 year ago - 10 downloads - 584 dependencies
fgualdr/envr_txdb latest

  • version: 1.8.0
Latest release: over 1 year ago - 10 downloads - 276 dependencies
yaobio/archr-4g latest

Docker images for ArchR (Analysis of Regulatory Chromatin in R)

  • version: 1.4.0
Latest release: over 1 year ago - 11 downloads - 643 dependencies
ericsalomaki/mirna 071723

  • version: 1.4.0
Latest release: over 1 year ago - 10 downloads - 1,834 dependencies
archang/seurat-zellk latest

  • version: 1.8.0
Latest release: over 1 year ago - 9 downloads - 935 dependencies
winuthayanon/seurat 4.3.0

  • version: 1.8.0
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 1.4.0
Latest release: over 1 year ago - 9 downloads - 2,274 dependencies
chlazaris/dge_env 0.1

  • version: 1.4.0
Latest release: over 1 year ago - 9 downloads - 320 dependencies
cjchen/gxuclass 1.0

  • version: 1.10.0
Latest release: over 1 year ago - 12 downloads - 657 dependencies
smemane20/error_thres_amd_64 latest

  • version: 1.10.0
Latest release: over 1 year ago - 10 downloads - 618 dependencies
preethiilumina/diffbind 1.5

fixed genome name

  • version: 1.8.0
Latest release: 9 months ago - 155 downloads - 626 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.10.0
Latest release: 8 months ago - 51 downloads - 1,224 dependencies
tomasgomes/nextflow_kallisto_sc 0.3

  • version: 1.4.0
Latest release: 12 months ago - 39 downloads - 1,194 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 1.10.0
Latest release: 9 months ago - 22 downloads - 1,356 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 1.8.0
Latest release: over 1 year ago - 7 downloads - 469 dependencies
trust1/jmml latest

JMML classifier

  • version: 1.4.0
Latest release: about 2 years ago - 8 downloads - 658 dependencies
leoschmutterer/regularity v1.1

  • version: 1.4.0
Latest release: over 1 year ago - 9 downloads - 349 dependencies
suimye/cage_box latest

  • version: 1.8.0
Latest release: over 1 year ago - 7 downloads - 698 dependencies
fgualdr/env_motifs latest

  • version: 1.8.0
Latest release: over 1 year ago - 5 downloads - 544 dependencies
bigomics/omicsplayground master

Self-service analytics for big omics data

  • version: 1.4.0
Latest release: 12 months ago - 9,749 downloads - 1,551 dependencies
scao/microsec 0.0.1

  • version: 1.8.0
Latest release: almost 2 years ago - 5,547 downloads - 507 dependencies
cgrlab/qctools v3.2-usertest

  • version: 1.8.0
Latest release: over 1 year ago - 1,432 downloads - 658 dependencies
abelean/seurat_desctools 4.1.0

  • version: 1.4.0
Latest release: almost 2 years ago - 605 downloads - 1,090 dependencies
bumproo/rnaseqclass23 latest

  • version: 1.10.0
Latest release: over 1 year ago - 413 downloads - 904 dependencies
bigomics/omicsplayground-base ub2204_v2

  • version: 1.4.0
Latest release: about 1 year ago - 1,389 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 1.2.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
sophiewebster/mhe latest

  • version: 1.10.0
Latest release: over 1 year ago - 345 downloads - 620 dependencies
jesusgf23/allenseurat latest

  • version: 1.8.0
Latest release: over 1 year ago - 328 downloads - 933 dependencies
datashield/rock-dolomite-xenon latest

  • version: 1.10.0
Latest release: over 1 year ago - 472 downloads - 1,410 dependencies
chiajungl/smk-scrna-extra 4.3-7.30-4.3

  • version: 1.10.0
Latest release: over 1 year ago - 255 downloads - 1,384 dependencies
cmccornack/crmsc latest

  • version: 1.4.0
Latest release: over 1 year ago - 289 downloads - 1,476 dependencies
ilariap/r_cnmops_exomedepth latest

Docker container containing panel-cnMops, cnMops and Exomedepth

  • version: 1.8.0
Latest release: almost 2 years ago - 195 downloads - 730 dependencies
eppicenter/mad4hatter latest

  • version: 1.10.0
Latest release: almost 2 years ago - 191 downloads - 739 dependencies
omicschef/rnaseqchef v1.0.9

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 1.10.0
Latest release: about 1 year ago - 287 downloads - 1,420 dependencies
commander121/rmarkdown latest

  • version: 1.10.0
Latest release: almost 2 years ago - 229 downloads - 1,625 dependencies
qdidiscoveryservices/vcfcompare 1.0

  • version: 1.10.0
Latest release: about 1 year ago - 463 downloads - 784 dependencies
cjchen/tbtoolszone 2.0

  • version: 1.4.0
Latest release: over 1 year ago - 131 downloads - 789 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.10.0
Latest release: over 1 year ago - 142 downloads - 1,223 dependencies
chiajungl/scrna-extra 4.3.0-1.4-4.3

  • version: 1.10.0
Latest release: over 1 year ago - 116 downloads - 1,350 dependencies
cjchen/scauclass_2023 1.0

  • version: 1.10.0
Latest release: over 1 year ago - 100 downloads - 393 dependencies
sridnona/r4.2.0 v1

  • version: 1.8.0
Latest release: over 1 year ago - 84 downloads - 832 dependencies
lroser/databricksbio latest

  • version: 1.10.0
Latest release: over 1 year ago - 79 downloads - 975 dependencies
tariship/dev_sync_directories latest

  • version: 1.8.0
Latest release: about 1 year ago - 112 downloads - 421 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.10.0
Latest release: over 1 year ago - 83 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 1.8.0
Latest release: over 1 year ago - 70 downloads - 290 dependencies
jpdodson/dsrna_docker latest

  • version: 1.8.0
Latest release: almost 2 years ago - 69 downloads - 208 dependencies
almurphy/mungesumstats latest

  • version: 1.11.0
Latest release: over 1 year ago - 63 downloads - 265 dependencies
dhspence/docker-rstudio-python latest

  • version: 1.8.0
Latest release: over 1 year ago - 60 downloads - 272 dependencies
gru4/scan2workinghg38 latest

  • version: 1.4.0
Latest release: over 1 year ago - 59 downloads - 776 dependencies
indraniel/chip-pipeline-annotation v1

  • version: 1.8.0
Latest release: over 1 year ago - 168 downloads - 218 dependencies
stefanucciluca/tregopathies latest

  • version: 1.8.0
Latest release: over 1 year ago - 72 downloads - 488 dependencies
gru4/scan2fixedhg38 latest

  • version: 1.4.0
Latest release: over 1 year ago - 55 downloads - 777 dependencies
etycksen/sc_deluxe 0.2

  • version: 1.8.0
Latest release: about 1 year ago - 249 downloads - 757 dependencies
mshriver01/share_task_archr latest

  • version: 1.4.0
Latest release: over 1 year ago - 46 downloads - 1,364 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 1.4.0
Latest release: about 1 year ago - 42 downloads - 316 dependencies
brusconi/seurat latest

  • version: 1.10.0
Latest release: over 1 year ago - 67 downloads - 536 dependencies
omicschef/epigenomechef v1.1.3

  • version: 1.10.0
Latest release: 11 months ago - 113 downloads - 1,066 dependencies
fluentin55/singlecell_docker 1.2

  • version: 1.8.0
Latest release: over 1 year ago - 40 downloads - 452 dependencies
alexthiery/archr_seurat_signac_mega 3.2

  • version: 1.4.0
Latest release: about 1 year ago - 70 downloads - 441 dependencies
andrewsg/archr macs2

  • version: 1.10.0
Latest release: over 1 year ago - 51 downloads - 1,356 dependencies
wyangwu/r4.1.2 latest

  • version: 1.4.0
Latest release: over 1 year ago - 67 downloads - 827 dependencies
bioxfu/xseurat2 latest

  • version: 1.8.0
Latest release: almost 2 years ago - 36 downloads - 982 dependencies
robertplayer/scidap-genelists v3.0.0

  • version: 1.4.0
Latest release: about 1 year ago - 74 downloads - 609 dependencies
gevrony/hidef-seq 1.2

  • version: 1.4.0
Latest release: about 1 year ago - 65 downloads - 1,205 dependencies
arnstrm2/genespace 1.1.4

  • version: 1.8.0
Latest release: over 1 year ago - 40 downloads - 294 dependencies
chunjiesamliu/scmocha latest

  • version: 1.10.0
Latest release: over 1 year ago - 43 downloads - 1,258 dependencies
srynobio/rna latest

  • version: 1.8.0
Latest release: over 1 year ago - 31 downloads - 269 dependencies
scwatts/bolt_gpgr 0.1.0

  • version: 1.4.0
Latest release: about 1 year ago - 30 downloads - 337 dependencies
mfilipuz/r_v423 23.05.09

  • version: 1.8.0
Latest release: over 1 year ago - 28 downloads - 208 dependencies