vmikk/nextits 0.5.0

arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

dnbelabc4/dnbc4dev 2.0.9

almadengenomics/arriba 2.4.0

alexdhill/complete-seq latest

dongminshin/sc_ppl 1.65

koji11235/rnaseq_env latest

sheddn/singlecell latest

atttilacs/ds_seurat_5_extras_hdf5r latest

bpimages/rgraphstuff-arm64 latest

omicsclass/pan-genome v1.0

gesiscss/binder-r2d-g5b5b759-keon-2darbabi-2dkcni-2dsummer-2dschool-2dday-2d3-e4e96e fad4fccb2e0c5030283f1b4e665b22eafa490b69

etretiakov/rocker-session latest

phenomedb/phenomedb-airflow latest

kazukinakamae/dangeranalysis 1.1

Instruction is here: https://github.com/KazukiNakamae/DANGER_analysis

alexsickler/toolkit_subtyping v2.0

mlampros/icesat2rbinder 1bcdaed54e71

nishunehra/phantasus_base v0_1

akialbz/ptox rstudio

qxes4210/mimseq double_result_page

This repo is for the mimseq web tool (tRNA analysis)

mfsentma/atacseq latest

andrewrrelmore/genepi_vscode test

skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

wuys13/docker-ckg latest

danhumassmed/de-seq-tools 1.0.1

Software for Bioinformatics pipelines HOMER, DESeq2, samtools, edgeR

cerebis/squeezemeta latest

skydashan/commot 1.0.1

kobedr/bismark_alignment_utils latest

bianca7/mompreprocess latest

vidhyagnanasekaran/rocker-single-cell v1

igrisch/seuratharmony latest

cgrlab/centos7_bfx 1.0.0

princessmaximacenter/gridss 2.13.2

jeffgillan/pointcloud_to_chm arm64

These containers will launch Rstudio Server with an R-script to convert LiDAR point cloud to raster.

jylin2022/r_svg_giotto latest

wilfriedguiblet/fraser v0.1

daemontus/software-cell-oracle latest

kubran/odcf_aceseqcalling v6

saulpierottiebi/biomart latest

bmgcode/glimma v2

almahmoud/shiny-iseehub anvil

joshuatobin257/drop latest

neurogenomicslab/scavenge main

ksinghal28/generate_pon 1.0

trust1/bethesda light

Brain tumor BethesdaV2 and EPIC (Bethesda v1) classifier box

skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

pl92297/sceqtl latest

alexthiery/archr_macs2_seurat 3.0

avi156/rocker-binder-upd 4.2.2

uvarc/rstudio tam5xe

natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

nolandocker/chipseq latest

ChIP-seq image using nfcore/chipseq with MAnorm.

mdbrannock/network_transform debug

ajhodgkinson/mitogwas latest

dovetailg/hiccompare latest

alfredshawn/wgbs_r 1.1

fgualdr/env_gsea latest

esollier/hmf latest

luslab/archr_dev latest

bigdatainbiomedicine/inspect-r latest

gm088/svm 030723

alexdhill/vscode complete-seq

Multipurpose developer suite with VSCode base. Supports C++, python, R with notebooks.

louisk92/spapros_genebasis v1.0

almadengenomics/rsem 1.3.3

maxfieldkelsey/snakesenescence latest

image for use in snakemake

sebimer/samba-v4-r 4.2.3

dovetailg/chicdiff latest

cplaisier/ccafv2_extra latest

alexthiery/archr_hicdc 3.0

cmatkhan/llfs_rnaseq_latest latest

cspinc/blm-pva-cv rstudio

rtibiocloud/neurogenomicslab_mungesumstats v1.7.10_6e16c82

ericsalomaki/rnaseq_r4_2 latest

jamestemple/meffil_image version1

omicsclass/metagenomics latest

kuglerf/tft_r v5

alexthiery/archr_dev_macs2 3.0

costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

brianyee/surf b77fd94

dovetailg/fitdiff latest

forest2000/seuratv5 latest

Update Seurat to version 5

abelean/seurat_deg 4.1.0

arrakistx/shapeware_dependencies 3.4

bitterfly/docker-ckg latest-dev-wgcna

cowmoo/ti_dynverse latest

oliveirahenrique70/app-tide latest

skydashan/infercnv 1.0.2

briansha/prepsct latest

ajay16bharadwaj/diann_msstats 3.22.1

robertplayer/scidap-qiime2 stable

btrspg/r-env latest

biocorecrg/trax 0.2