Ecosyste.ms: Docker

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Package Usage : cran : BiocGenerics

Explore the latest package usage data for BiocGenerics in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 836
Total downloads: 4,055,585

More details on packages.ecosyste.ms - JSON

gesiscss/binder-r2d-g5b5b759-natpombubpa-2damptk-5f1-2e5-2e4-904cbc b7b2357f6670556e582166033b738136fa103199

  • version: 0.44.0
Latest release: over 1 year ago - 22 downloads - 1,700 dependencies
haokimriid/r-base latest

  • version: 0.46.0
Latest release: over 1 year ago - 9 downloads - 385 dependencies
bbeacosta/sctype latest

  • version: 0.44.0
Latest release: over 1 year ago - 9 downloads - 1,391 dependencies
c00cjz00/imputationserver v1.5.7.v1

  • version: 0.24.0
Latest release: over 1 year ago - 9 downloads - 1,558 dependencies
jysgro/tidytranstriptomics_arm64 latest

Based on https://github.com/stemangiola/bioc2021_tidytranscriptomics/

  • version: 0.45.3
Latest release: over 1 year ago - 8 downloads - 1,266 dependencies
buddej/scshc 0.1.0

  • version: 0.46.0
Latest release: over 1 year ago - 8 downloads - 950 dependencies
todzhu/monocle latest

  • version: 0.44.0
Latest release: over 1 year ago - 9 downloads - 591 dependencies
estat/rdc301-upload 08-12-2023-083956

  • version: 0.44.0
Latest release: 12 months ago - 56 downloads - 1,515 dependencies
qtulab/miniencode latest

  • version: 0.40.0
Latest release: about 1 year ago - 56 downloads - 4,269 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 0.46.0
Latest release: 9 months ago - 22 downloads - 1,356 dependencies
hwt940810/wentaohan_altanalyze_0.7 latest

  • version: 0.28.0
Latest release: over 1 year ago - 8 downloads - 801 dependencies
npcooley/nmdctest01 1.0

  • version: 0.46.0
Latest release: over 1 year ago - 9 downloads - 919 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 0.46.0
Latest release: over 1 year ago - 5 downloads - 724 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 0.44.0
Latest release: over 1 year ago - 7 downloads - 469 dependencies
gesiscss/binder-r2d-g5b5b759-angrymaciek-2dwarlock-dd4b2f 790d22e93c5938404b49bc684e2452b0ff43f86d

  • version: 0.32.0
Latest release: over 1 year ago - 11 downloads - 2,173 dependencies
adfncgr/mpr-genotyping latest

  • version: 0.46.0
Latest release: almost 2 years ago - 9 downloads - 437 dependencies
trust1/jmml latest

JMML classifier

  • version: 0.40.0
Latest release: about 2 years ago - 8 downloads - 658 dependencies
hieutran2907/ichorcna_samtools v1

  • version: 0.36.0
Latest release: over 1 year ago - 8 downloads - 363 dependencies
altyn745/txsim latest

  • version: 0.46.0
Latest release: over 1 year ago - 14 downloads - 1,684 dependencies
bianca7/clusterprofiler latest

  • version: 0.47.0
Latest release: over 1 year ago - 11 downloads - 1,315 dependencies
leoschmutterer/regularity v1.1

  • version: 0.40.0
Latest release: over 1 year ago - 9 downloads - 349 dependencies
suimye/cage_box latest

  • version: 0.44.0
Latest release: over 1 year ago - 7 downloads - 698 dependencies
mapostolides/test12345 latest

  • version: 0.32.0
Latest release: over 1 year ago - 8 downloads - 566 dependencies
nahyunkong/sv-pipeline latest

  • version: 0.40.0
Latest release: almost 2 years ago - 9 downloads - 1,083 dependencies
skchronicles/flair v0.1.0

Docker image for FLAIR: Full-Length Alternative Isoform analysis of RNA

  • version: 0.40.0
Latest release: over 1 year ago - 9 downloads - 729 dependencies
fgualdr/env_motifs latest

  • version: 0.44.0
Latest release: over 1 year ago - 5 downloads - 544 dependencies
nazhar/scrnaseq flow2

  • version: 0.44.0
Latest release: over 1 year ago - 10 downloads - 535 dependencies
kuangda/pc12 latest

  • version: 0.42.0
Latest release: almost 2 years ago - 6 downloads - 1,326 dependencies
bigomics/omicsplayground master

Self-service analytics for big omics data

  • version: 0.40.0
Latest release: 12 months ago - 9,749 downloads - 1,551 dependencies
scao/microsec 0.0.1

  • version: 0.44.0
Latest release: almost 2 years ago - 5,547 downloads - 507 dependencies
prismcmap/biomarker 94804f34cf31

  • version: 0.36.1
Latest release: 12 months ago - 3,516 downloads - 633 dependencies
prismcmap/drc dd55695d58fb

  • version: 0.36.1
Latest release: 12 months ago - 1,524 downloads - 657 dependencies
ljanin/qsub-to-basespace 4.2.0

  • version: 0.24.0
Latest release: over 1 year ago - 827 downloads - 1,228 dependencies
cgrlab/qctools v3.2-usertest

  • version: 0.44.0
Latest release: over 1 year ago - 1,432 downloads - 658 dependencies
abelean/seurat_desctools 4.1.0

  • version: 0.40.0
Latest release: almost 2 years ago - 605 downloads - 1,090 dependencies
cerebrassu/downstream cerebra-0.1.3

  • version: 0.44.0
Latest release: over 1 year ago - 608 downloads - 2,727 dependencies
bumproo/rnaseqclass23 latest

  • version: 0.46.0
Latest release: over 1 year ago - 413 downloads - 904 dependencies
fauzul/cnvkit_cn 1.0

  • version: 0.36.1
Latest release: over 1 year ago - 1,101 downloads - 453 dependencies
alanwucci/rsem_to_ensembl 1.1

  • version: 0.36.0
Latest release: over 1 year ago - 403 downloads - 78 dependencies
bigomics/omicsplayground-base ub2204_v2

  • version: 0.40.0
Latest release: about 1 year ago - 1,389 downloads - 1,536 dependencies
marcinkam/gdrshiny 0.20

  • version: 0.44.0
Latest release: about 1 year ago - 444 downloads - 1,082 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 0.38.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
vanallenlab/g2c_pipeline nf_sex_ancestry_alpha

  • version: 0.40.0
Latest release: 12 months ago - 110,553 downloads - 1,237 dependencies
sophiewebster/mhe latest

  • version: 0.46.0
Latest release: over 1 year ago - 345 downloads - 620 dependencies
mparikhbroad/mast_workflow 1.0.2

  • version: 0.46.0
Latest release: over 1 year ago - 461 downloads - 1,607 dependencies
jesusgf23/allenseurat latest

  • version: 0.44.0
Latest release: over 1 year ago - 328 downloads - 933 dependencies
datashield/rock-dolomite-xenon latest

  • version: 0.46.0
Latest release: over 1 year ago - 472 downloads - 1,410 dependencies
jorgeamaya/dada2_terra_iseq v1

  • version: 0.46.0
Latest release: over 1 year ago - 390 downloads - 967 dependencies
alesmaver/scramble2 latest

  • version: 0.32.0
Latest release: over 1 year ago - 478 downloads - 1,116 dependencies
mrjbd/bdb latest

  • version: 0.32.0
Latest release: almost 2 years ago - 268 downloads - 1,290 dependencies
filisiaa/star_rsem_bwt latest

  • version: 0.36.0
Latest release: over 1 year ago - 453 downloads - 205 dependencies
chiajungl/smk-scrna-extra 4.3-7.30-4.3

  • version: 0.46.0
Latest release: over 1 year ago - 255 downloads - 1,384 dependencies
cmccornack/crmsc latest

  • version: 0.40.0
Latest release: over 1 year ago - 289 downloads - 1,476 dependencies
andrewatmp/testf latest

  • version: 0.44.0
Latest release: over 1 year ago - 316 downloads - 536 dependencies
jlund256/rna_variants latest

  • version: 0.36.0
Latest release: about 1 year ago - 288 downloads - 752 dependencies
ilariap/r_cnmops_exomedepth latest

Docker container containing panel-cnMops, cnMops and Exomedepth

  • version: 0.44.0
Latest release: almost 2 years ago - 195 downloads - 730 dependencies
btrspg/genekitr latest

  • version: 0.46.0
Latest release: over 1 year ago - 162 downloads - 1,987 dependencies
eppicenter/mad4hatter latest

  • version: 0.46.0
Latest release: almost 2 years ago - 191 downloads - 739 dependencies
omicschef/rnaseqchef v1.0.9

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 0.46.0
Latest release: about 1 year ago - 287 downloads - 1,420 dependencies
commander121/rmarkdown latest

  • version: 0.46.0
Latest release: almost 2 years ago - 229 downloads - 1,625 dependencies
bpimages/bnlearn 4.8.3

  • version: 0.46.0
Latest release: about 1 year ago - 232 downloads - 349 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 0.36.1
Latest release: over 1 year ago - 156 downloads - 1,173 dependencies
bpimages/benchpress 2.1.0

  • version: 0.46.0
Latest release: about 1 year ago - 282 downloads - 514 dependencies
bpimages/bidag 2.1.4

  • version: 0.46.0
Latest release: over 1 year ago - 248 downloads - 364 dependencies
bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

  • version: 0.44.0
Latest release: over 1 year ago - 134 downloads - 752 dependencies
qdidiscoveryservices/vcfcompare 1.0

  • version: 0.46.0
Latest release: over 1 year ago - 463 downloads - 784 dependencies
cjchen/tbtoolszone 2.0

  • version: 0.40.0
Latest release: over 1 year ago - 131 downloads - 789 dependencies
fallingstar10/hbsigrocker latest

  • version: 0.46.0
Latest release: over 1 year ago - 142 downloads - 1,223 dependencies
denklewer/linseedv2 latest

  • version: 0.38.0
Latest release: almost 2 years ago - 182 downloads - 1,153 dependencies
alexthiery/schelper seurat-schelper-0.3.5

  • version: 0.36.1
Latest release: over 1 year ago - 211 downloads - 1,494 dependencies
chiajungl/scrna-extra 4.3.0-1.4-4.3

  • version: 0.46.0
Latest release: over 1 year ago - 116 downloads - 1,350 dependencies
muhengliao/r_docker2 maching_learning

  • version: 0.36.0
Latest release: over 1 year ago - 115 downloads - 515 dependencies
sviatsidorov/r_processor 0.4

Analysis of alternative isoforms of human TFs in R

  • version: 0.44.0
Latest release: about 1 year ago - 110 downloads - 550 dependencies
harryhungch/spn-pbp-amr 23.9.28

Image built from HarryHung/spn-resistance-pbp

  • version: 0.32.0
Latest release: about 1 year ago - 114 downloads - 485 dependencies
qdidiscoveryservices/sclite_generate_clean_osprj v1.1

  • version: 0.46.0
Latest release: about 1 year ago - 102 downloads - 890 dependencies
sgiamberardinorti/dge_analysis 202304171546_x86_64

  • version: 0.44.0
Latest release: over 1 year ago - 102 downloads - 1,881 dependencies
pipecraft/vsearch_dada2 0

  • version: 0.46.0
Latest release: about 1 year ago - 153 downloads - 785 dependencies
cjchen/scauclass_2023 1.0

  • version: 0.46.0
Latest release: over 1 year ago - 100 downloads - 393 dependencies
theflightsims/researchlabs latest

  • version: 0.46.0
Latest release: over 1 year ago - 87 downloads - 6,804 dependencies
mesti90/ecoli_hgt_all_in 1.1

  • version: 0.44.0
Latest release: about 1 year ago - 88 downloads - 1,148 dependencies
shengqh/cqs_smallrnaseq latest

  • version: 0.46.0
Latest release: 10 months ago - 133 downloads - 1,416 dependencies
njjai/scrattch_mapping 0.52.2

  • version: 0.44.0
Latest release: 10 months ago - 436 downloads - 867 dependencies
sridnona/r4.2.0 v1

  • version: 0.44.0
Latest release: over 1 year ago - 84 downloads - 832 dependencies
gesiscss/binder-r2d-g5b5b759-nimh-2dhbcc-2dhbcc-5fsnrnaseq-5fsgacc-2ddlpfc-a0409e f0f54e1008536ab644e4e62ee88918b529b8555d

  • version: 0.40.0
Latest release: almost 2 years ago - 113 downloads - 2,762 dependencies
lroser/databricksbio latest

  • version: 0.46.0
Latest release: over 1 year ago - 79 downloads - 975 dependencies
weizhoujp/rchtc 4.3.0

  • version: 0.46.0
Latest release: over 1 year ago - 141 downloads - 738 dependencies
globusgenomics/picrust 1.0

  • version: 0.40.0
Latest release: almost 2 years ago - 77 downloads - 595 dependencies
tariship/dev_sync_directories latest

  • version: 0.44.0
Latest release: about 1 year ago - 112 downloads - 421 dependencies
andimajore/unpast_eval_container_asthma latest

  • version: 0.24.0, 0.44.0
Latest release: over 1 year ago - 75 downloads - 486 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 0.46.0
Latest release: over 1 year ago - 83 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 0.44.0
Latest release: over 1 year ago - 70 downloads - 290 dependencies