Ecosyste.ms: Docker

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Package Usage : cran : BiocGenerics

Explore the latest package usage data for BiocGenerics in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 836
Total downloads: 4,055,585

More details on packages.ecosyste.ms - JSON

cimendes/splicing-pipelines-nf 3.1.ubuntu

  • version: 0.38.0
Latest release: almost 2 years ago - 237 downloads - 227 dependencies
biocontainers/bioconductor-makecdfenv v1.50.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 517 downloads - 401 dependencies
dhspence/docker-ichor latest

  • version: 0.26.0
Latest release: over 6 years ago - 236 downloads - 961 dependencies
biocontainers/bioconductor-interactivedisplaybase v1.12.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 477 downloads - 431 dependencies
biocontainers/bioconductor-annotate v1.52.1dfsg-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 520 downloads - 426 dependencies
biocontainers/bioconductor-genomicalignments v1.10.0-1b1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 520 downloads - 423 dependencies
biocontainers/bioconductor-multtest v2.30.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 516 downloads - 393 dependencies
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 477 downloads - 568 dependencies
biocontainers/bioconductor-go.db v3.4.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 517 downloads - 418 dependencies
biocontainers/bioconductor-geneplotter v1.52.0-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 517 downloads - 430 dependencies
koki/sctensor-experiments 20220208

  • version: 0.40.0
Latest release: almost 3 years ago - 206 downloads - 2,071 dependencies
evolbioinfo/deseq2 v1.28.1

  • version: 0.34.0
Latest release: about 4 years ago - 206 downloads - 452 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 0.38.0
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
biocontainers/biosigner phenomenal-v2.2.8_cv1.4.26

Discovery of significant signatures from omics data.

  • version: 0.24.0
Latest release: over 6 years ago - 201 downloads - 240 dependencies
recetox/ramclustr 1.1.0-recetox0

  • version: 0.34.0
Latest release: about 4 years ago - 191 downloads - 593 dependencies
koki/biocdev 20230818

  • version: 0.47.0
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
anand7899/rmarkdown latest

  • version: 0.44.0
Latest release: about 2 years ago - 262 downloads - 766 dependencies
prismcmap/sushi develop

  • version: 0.36.1
Latest release: 10 months ago - 221 downloads - 723 dependencies
hoonbiolab/hmftools v1.1

  • version: 0.38.0
Latest release: about 3 years ago - 1,211 downloads - 693 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 0.40.0
Latest release: about 2 years ago - 172 downloads - 962 dependencies
austinhpatton123/cogeqc-1.2.0_r-4.2.2 latest

  • version: 0.44.0
Latest release: almost 2 years ago - 169 downloads - 451 dependencies
broadinstitute/pcawg_broad_wgs_variant_callers mutect_2percent_floor

pcawg_broad_wgs_variant_callers

  • version: 0.24.0
Latest release: almost 7 years ago - 246 downloads - 865 dependencies
biocontainers/bioconductor-rtracklayer v1.34.1-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 160 downloads - 427 dependencies
biocontainers/bioconductor-rbgl v1.50.0dfsg1-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 156 downloads - 392 dependencies
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 156 downloads - 572 dependencies
chgyi/bio 3.5.1

  • version: 0.26.0
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
canaantt/notitia-ocpu latest

This is part of zager/notitia.

  • version: 0.24.0
Latest release: almost 7 years ago - 153 downloads - 633 dependencies
biocontainers/bioconductor-s4vectors v0.12.1-2b1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 153 downloads - 390 dependencies
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 155 downloads - 523 dependencies
biocontainers/bioconductor-xvector v0.14.0-1b1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 153 downloads - 394 dependencies
broadinstitute/pcawg_full 7

  • version: 0.22.0
Latest release: about 7 years ago - 146 downloads - 889 dependencies
biocontainers/bioconductor-hypergraph v1.46.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 146 downloads - 392 dependencies
biocontainers/bioconductor-summarizedexperiment v1.4.0-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 141 downloads - 407 dependencies
biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 139 downloads - 485 dependencies
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 140 downloads - 453 dependencies
biocontainers/bioconductor-metagenomeseq v1.16.0-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 138 downloads - 417 dependencies
biocontainers/bioconductor-biostrings v2.42.1-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 139 downloads - 396 dependencies
biocontainers/bioconductor-altcdfenvs v1-2.36.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 139 downloads - 415 dependencies
biocontainers/bioconductor-annotationhub v2.6.4-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 139 downloads - 459 dependencies
biocontainers/bioconductor-biocgenerics v0.20.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 138 downloads - 388 dependencies
biocontainers/bioconductor-genomeinfodb v1.10.3-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 138 downloads - 398 dependencies
biocontainers/bioconductor-genefilter v1.56.0-1-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 133 downloads - 428 dependencies
hoonbiolab/hl_base v1.2

  • version: 0.32.0
Latest release: about 2 years ago - 136 downloads - 873 dependencies
biocontainers/bioconductor-annotationdbi v1.36.1-2-deb_cv1

  • version: 0.20.0
Latest release: over 6 years ago - 134 downloads - 416 dependencies
chgyi/metaware_rna_denovo latest

  • version: 0.28.0
Latest release: over 5 years ago - 132 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 0.26.0
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 0.26.0
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
dmiller15/sequenza 3.0.0

  • version: 0.26.0
Latest release: almost 2 years ago - 118 downloads - 448 dependencies
recetox/xmsannotator latest

  • version: 0.34.0
Latest release: over 3 years ago - 113 downloads - 448 dependencies
dhspence/docker-hiccompare latest

  • version: 0.32.0
Latest release: over 3 years ago - 113 downloads - 1,271 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 0.39.2
Latest release: about 3 years ago - 111 downloads - 2,087 dependencies
atttilacs/dsp_geomxtools latest

  • version: 0.40.0
Latest release: about 2 years ago - 114 downloads - 871 dependencies
kcapd/wings-genomics latest

WINGS workflow system with software for genomics operations.

  • version: 0.20.0
Latest release: about 4 years ago - 103 downloads - 1,468 dependencies
atttilacs/seurat_big latest

  • version: 0.40.0
Latest release: almost 2 years ago - 495 downloads - 997 dependencies
recetox/recetox-xmsannotator october-conda0

  • version: 0.38.0
Latest release: about 3 years ago - 95 downloads - 484 dependencies
broadinstitute/pcawg_tokens latest

  • version: 0.18.0
Latest release: about 8 years ago - 90 downloads - 1,472 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 0.26.0
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 0.40.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
crukmi/mesa main

  • version: 0.43.4
Latest release: about 2 years ago - 91 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 0.40.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
atttilacs/dsp_giotto latest

  • version: 0.40.0
Latest release: about 2 years ago - 101 downloads - 1,154 dependencies
tercen/flowsom_mst 0.1.6

  • version: 0.36.1
Latest release: about 3 years ago - 88 downloads - 787 dependencies
veitveit/isoprot latest

  • version: 0.28.0
Latest release: over 5 years ago - 86 downloads - 2,182 dependencies
veitveit/viqor latest

  • version: 0.44.0
Latest release: about 3 years ago - 88 downloads - 1,141 dependencies
hoonbiolab/cnvkit v1.1

  • version: 0.32.0
Latest release: about 3 years ago - 83 downloads - 817 dependencies
gene110/reportnipt550 latest

  • version: 0.32.0
Latest release: over 3 years ago - 88 downloads - 577 dependencies
veitveit/compomicsworkflow dev

  • version: 0.36.0
Latest release: almost 4 years ago - 80 downloads - 537 dependencies
mlepetit/ranalysis 3.3.4

  • version: 0.38.0
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
tercen/flowsuite 0.0.4

  • version: 0.36.1
Latest release: over 2 years ago - 99 downloads - 1,512 dependencies
dolphinnext/ont_variant_calling 1.0

  • version: 0.44.0
Latest release: almost 2 years ago - 80 downloads - 494 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 0.44.0
Latest release: almost 2 years ago - 75 downloads - 382 dependencies
hdsu/etbii2023 latest

  • version: 0.40.0
Latest release: almost 2 years ago - 73 downloads - 358 dependencies
vanessa/rstudio-neuro latest

Dockerized rstudio with some statistics and neuro packages!

  • version: 0.24.0
Latest release: almost 7 years ago - 66 downloads - 199 dependencies
chriswyatt/goatee_biomart latest

  • version: 0.40.0
Latest release: almost 3 years ago - 95 downloads - 229 dependencies
qdidiscoveryservices/quantiseqr v1

  • version: 0.41.2
Latest release: over 2 years ago - 65 downloads - 1,201 dependencies
koki/rstudio_mesh latest

  • version: 0.41.2
Latest release: about 3 years ago - 67 downloads - 1,389 dependencies
ccdlstaging/dr_common_tests 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 0.24.0
Latest release: 12 months ago - 710 downloads - 784 dependencies
tercen/flowsom_operator 1.6.0

  • version: 0.42.0
Latest release: almost 2 years ago - 105 downloads - 1,563 dependencies
pego/dowhy-examples-notebooks-deps latest

  • version: 0.42.0
Latest release: over 2 years ago - 64 downloads - 797 dependencies
intelliseqngs/task_bam-exon-depth 1.0.4

  • version: 0.32.0
Latest release: over 2 years ago - 67 downloads - 547 dependencies
koki/annotationhub 20210323

  • version: 0.36.0
Latest release: over 3 years ago - 73 downloads - 1,250 dependencies
qdidiscoveryservices/ssgsea 1.0

  • version: 0.44.0
Latest release: almost 2 years ago - 65 downloads - 665 dependencies
sktrinh12/romiq-ctnr latest

r instance for testing

  • version: 0.32.0
Latest release: almost 4 years ago - 59 downloads - 1,195 dependencies
koki/tensor-project-plasmids 20211014

  • version: 0.38.0
Latest release: about 3 years ago - 54 downloads - 1,169 dependencies
millerh1/ste v1.0

  • version: 0.44.0
Latest release: almost 2 years ago - 9,929 downloads - 844 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 0.32.0
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 0.40.0
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
lorentzb/gene8940_r 1.0

  • version: 0.44.0
Latest release: almost 2 years ago - 55 downloads - 926 dependencies
dhspence/docker-vep 93

  • version: 0.26.0
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 0.26.0
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
qdidiscoveryservices/bam_to_10x_counts_pandoc latest

  • version: 0.40.0
Latest release: almost 2 years ago - 51 downloads - 964 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 0.32.0, 0.44.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
dhspence/encode-atac 1

encode atac pipeline docker image

  • version: 0.16.1
Latest release: almost 6 years ago - 55 downloads - 705 dependencies
koki/trybioworkshop sha-07d5fb0

  • version: 0.39.2
Latest release: about 3 years ago - 49 downloads - 1,175 dependencies
hoonbiolab/cnvpytor v1.1

  • version: 0.32.0
Latest release: about 3 years ago - 52 downloads - 807 dependencies
maestsi/nf-m6anet v1

  • version: 0.36.1
Latest release: almost 2 years ago - 54 downloads - 645 dependencies
koki/delayedtensor-experiments 20230818

  • version: 0.47.0
Latest release: over 1 year ago - 57 downloads - 1,295 dependencies