Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : BiocGenerics
Explore the latest package usage data for BiocGenerics in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 836
Total downloads: 4,055,585
More details on packages.ecosyste.ms - JSON
cimendes/splicing-pipelines-nf 3.1.ubuntu
- version: 0.38.0
biocontainers/bioconductor-makecdfenv v1.50.0-1-deb_cv1
- version: 0.20.0
dhspence/docker-ichor latest
- version: 0.26.0
biocontainers/bioconductor-interactivedisplaybase v1.12.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-annotate v1.52.1dfsg-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-genomicalignments v1.10.0-1b1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-multtest v2.30.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-go.db v3.4.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-geneplotter v1.52.0-2-deb_cv1
- version: 0.20.0
koki/sctensor-experiments 20220208
- version: 0.40.0
evolbioinfo/deseq2 v1.28.1
- version: 0.34.0
qdidiscoveryservices/scrna_downstream 1.1
- version: 0.38.0
biocontainers/biosigner phenomenal-v2.2.8_cv1.4.26
Discovery of significant signatures from omics data.
- version: 0.24.0
recetox/ramclustr 1.1.0-recetox0
- version: 0.34.0
koki/biocdev 20230818
- version: 0.47.0
anand7899/rmarkdown latest
- version: 0.44.0
prismcmap/sushi develop
- version: 0.36.1
hoonbiolab/hmftools v1.1
- version: 0.38.0
qdidiscoveryservices/bam_to_10x_counts latest
- version: 0.40.0
austinhpatton123/cogeqc-1.2.0_r-4.2.2 latest
- version: 0.44.0
broadinstitute/pcawg_broad_wgs_variant_callers mutect_2percent_floor
pcawg_broad_wgs_variant_callers
- version: 0.24.0
biocontainers/bioconductor-rtracklayer v1.34.1-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-rbgl v1.50.0dfsg1-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1
- version: 0.20.0
chgyi/bio 3.5.1
- version: 0.26.0
canaantt/notitia-ocpu latest
This is part of zager/notitia.
- version: 0.24.0
biocontainers/bioconductor-s4vectors v0.12.1-2b1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-xvector v0.14.0-1b1-deb_cv1
- version: 0.20.0
broadinstitute/pcawg_full 7
- version: 0.22.0
biocontainers/bioconductor-hypergraph v1.46.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-summarizedexperiment v1.4.0-2-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-metagenomeseq v1.16.0-2-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-biostrings v2.42.1-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-altcdfenvs v1-2.36.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-annotationhub v2.6.4-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-biocgenerics v0.20.0-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-genomeinfodb v1.10.3-1-deb_cv1
- version: 0.20.0
biocontainers/bioconductor-genefilter v1.56.0-1-deb_cv1
- version: 0.20.0
hoonbiolab/hl_base v1.2
- version: 0.32.0
biocontainers/bioconductor-annotationdbi v1.36.1-2-deb_cv1
- version: 0.20.0
chgyi/metaware_rna_denovo latest
- version: 0.28.0
mirekphd/ml-cpu-r35-nx devel_fdbf539
- version: 0.26.0
dhspence/docker-manta 1.5.0
- version: 0.26.0
dmiller15/sequenza 3.0.0
- version: 0.26.0
recetox/xmsannotator latest
- version: 0.34.0
dhspence/docker-hiccompare latest
- version: 0.32.0
koki/sctensor-workshop sha-fa8c4cf
- version: 0.39.2
atttilacs/dsp_geomxtools latest
- version: 0.40.0
kcapd/wings-genomics latest
WINGS workflow system with software for genomics operations.
- version: 0.20.0
atttilacs/seurat_big latest
- version: 0.40.0
recetox/recetox-xmsannotator october-conda0
- version: 0.38.0
broadinstitute/pcawg_tokens latest
- version: 0.18.0
mirekphd/ml-cpu-r35-rdp 20180918
- version: 0.26.0
jafoltz/scclassify latest
- version: 0.40.0
crukmi/mesa main
- version: 0.43.4
testalabgh/downstream signac-1.4.0
- version: 0.40.0
atttilacs/dsp_giotto latest
- version: 0.40.0
tercen/flowsom_mst 0.1.6
- version: 0.36.1
veitveit/isoprot latest
- version: 0.28.0
veitveit/viqor latest
- version: 0.44.0
hoonbiolab/cnvkit v1.1
- version: 0.32.0
gene110/reportnipt550 latest
- version: 0.32.0
veitveit/compomicsworkflow dev
- version: 0.36.0
mlepetit/ranalysis 3.3.4
- version: 0.38.0
tercen/flowsuite 0.0.4
- version: 0.36.1
dolphinnext/ont_variant_calling 1.0
- version: 0.44.0
scgfacility/rstudio-course22 v0.11
image used to run the course 2022
- version: 0.44.0
hdsu/etbii2023 latest
- version: 0.40.0
vanessa/rstudio-neuro latest
Dockerized rstudio with some statistics and neuro packages!
- version: 0.24.0
chriswyatt/goatee_biomart latest
- version: 0.40.0
qdidiscoveryservices/quantiseqr v1
- version: 0.41.2
koki/rstudio_mesh latest
- version: 0.41.2
ccdlstaging/dr_common_tests 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 0.24.0
tercen/flowsom_operator 1.6.0
- version: 0.42.0
pego/dowhy-examples-notebooks-deps latest
- version: 0.42.0
intelliseqngs/task_bam-exon-depth 1.0.4
- version: 0.32.0
koki/annotationhub 20210323
- version: 0.36.0
qdidiscoveryservices/ssgsea 1.0
- version: 0.44.0
sktrinh12/romiq-ctnr latest
r instance for testing
- version: 0.32.0
koki/tensor-project-plasmids 20211014
- version: 0.38.0
millerh1/ste v1.0
- version: 0.44.0
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520
- version: 0.32.0
tipsarin/rstudio 4.1.3viraltrack
- version: 0.40.0
lorentzb/gene8940_r 1.0
- version: 0.44.0
dhspence/docker-vep 93
- version: 0.26.0
mirekphd/ml-cpu-r35-guac devel_6f33d1e
- version: 0.26.0
qdidiscoveryservices/bam_to_10x_counts_pandoc latest
- version: 0.40.0
doejgi/trinityrnaseq-wdl 2.11.0b
- version: 0.32.0, 0.44.0
dhspence/encode-atac 1
encode atac pipeline docker image
- version: 0.16.1
koki/trybioworkshop sha-07d5fb0
- version: 0.39.2
hoonbiolab/cnvpytor v1.1
- version: 0.32.0
maestsi/nf-m6anet v1
- version: 0.36.1
koki/delayedtensor-experiments 20230818
- version: 0.47.0