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Package Usage : cran : BiocFileCache

Explore the latest package usage data for BiocFileCache in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 255
Total downloads: 190,367

More details on packages.ecosyste.ms - JSON

nathanprovin/cellcom 1.2.2

  • version: 2.8.0
Latest release: almost 2 years ago - 146 downloads - 596 dependencies
nciccbr/ccbr_fraser_1.10.2 latest

  • version: 1.14.0
Latest release: over 2 years ago - 74 downloads - 293 dependencies
almurphy/mungesumstats latest

  • version: 2.9.0
Latest release: about 2 years ago - 70 downloads - 265 dependencies
broadcptacdev/activedriver_mimp latest

  • version: 1.10.2
Latest release: over 2 years ago - 80 downloads - 374 dependencies
indraniel/chip-pipeline-annotation v1

  • version: 2.6.1
Latest release: about 2 years ago - 273 downloads - 218 dependencies
etycksen/sc_deluxe 0.6

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 2.6.1
Latest release: about 1 year ago - 2,031 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 2.2.1
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
alexsickler/open-pedcan latest

  • version: 1.10.2
Latest release: over 2 years ago - 150 downloads - 864 dependencies
broadcptac/panoply_so_nmf_sankey_report DEV

  • version: 1.10.2
Latest release: about 2 years ago - 66 downloads - 383 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 2.2.1
Latest release: almost 2 years ago - 120 downloads - 316 dependencies
brusconi/seurat new

  • version: 2.8.0
Latest release: about 1 year ago - 124 downloads - 536 dependencies
omicschef/epigenomechef v1.1.5

  • version: 2.8.0
Latest release: over 1 year ago - 390 downloads - 1,066 dependencies
nfancy/scflow 0.7.4

  • version: 2.6.1
Latest release: over 1 year ago - 275 downloads - 778 dependencies
fluentin55/singlecell_docker 1.2

  • version: 2.6.1
Latest release: over 2 years ago - 95 downloads - 452 dependencies
alexthiery/archr_seurat_signac_mega 3.2

  • version: 2.2.1
Latest release: almost 2 years ago - 132 downloads - 441 dependencies
andrewsg/archr dev

  • version: 2.8.0
Latest release: over 1 year ago - 132 downloads - 1,356 dependencies
wyangwu/r4.1.2 latest

  • version: 2.2.1
Latest release: about 2 years ago - 93 downloads - 827 dependencies
bioxfu/xseurat2 latest

  • version: 2.6.0
Latest release: over 2 years ago - 63 downloads - 982 dependencies
gevrony/hidef-seq 3.0

  • version: 2.2.1
Latest release: 6 months ago - 261 downloads - 1,205 dependencies
chunjiesamliu/scmocha latest

  • version: 2.8.0
Latest release: almost 2 years ago - 67 downloads - 1,258 dependencies
srynobio/rna latest

  • version: 2.6.1
Latest release: about 2 years ago - 50 downloads - 269 dependencies
mskilab/hetpileups latest

  • version: 1.14.0
Latest release: almost 2 years ago - 132 downloads - 246 dependencies
scwatts/bolt_gpgr 0.1.0

  • version: 2.2.0
Latest release: almost 2 years ago - 48 downloads - 337 dependencies
mfilipuz/r_v423 23.05.09

  • version: 2.6.1
Latest release: about 2 years ago - 43 downloads - 208 dependencies
fgualdr/env_norm_gr_idr latest

  • version: 2.6.0
Latest release: about 2 years ago - 65 downloads - 506 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 2.6.1
Latest release: about 2 years ago - 166 downloads - 2,089 dependencies
skchronicles/genome-seek_trim_map v0.1.1

Official docker image for trimming and alignment with genome-seek

  • version: 2.6.1
Latest release: 9 months ago - 266 downloads - 1,367 dependencies
qdidiscoveryservices/diffbind latest

  • version: 2.8.0
Latest release: about 2 years ago - 40 downloads - 526 dependencies
digitalproteomes/mh_class 2023

  • version: 2.2.1
Latest release: over 2 years ago - 71 downloads - 3,939 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 2.6.1
Latest release: about 2 years ago - 71 downloads - 1,158 dependencies
winuthayanon/rstudio 4.3.0

  • version: 2.8.0
Latest release: about 2 years ago - 128 downloads - 2,687 dependencies
singha53/modc v0.1

  • version: 2.2.1
Latest release: almost 2 years ago - 34 downloads - 783 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 2.6.1
Latest release: about 2 years ago - 31 downloads - 1,568 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 2.8.0
Latest release: about 1 year ago - 157 downloads - 4,337 dependencies
arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

  • version: 2.8.0
Latest release: almost 2 years ago - 67 downloads - 1,444 dependencies
alexdhill/complete-seq time

  • version: 2.8.0
Latest release: about 1 year ago - 1,773 downloads - 584 dependencies
koji11235/rnaseq_env latest

  • version: 1.10.2
Latest release: over 2 years ago - 83 downloads - 981 dependencies
etretiakov/rocker-session latest

  • version: 2.8.0
Latest release: about 2 years ago - 57 downloads - 2,565 dependencies
mfsentma/atacseq latest

  • version: 2.2.1
Latest release: over 2 years ago - 33 downloads - 852 dependencies
andrewrrelmore/genepi_vscode test

  • version: 2.6.1
Latest release: almost 2 years ago - 42 downloads - 1,188 dependencies
skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

  • version: 2.6.1
Latest release: over 2 years ago - 266 downloads - 1,367 dependencies
bianca7/mompreprocess latest

  • version: 2.9.1
Latest release: about 2 years ago - 319 downloads - 1,340 dependencies
vidhyagnanasekaran/rocker-single-cell v1

  • version: 2.6.0
Latest release: over 2 years ago - 34 downloads - 886 dependencies
cgrlab/centos7_bfx 1.0.0

  • version: 2.6.1
Latest release: over 2 years ago - 48 downloads - 1,457 dependencies
princessmaximacenter/gridss 2.13.2

  • version: 2.2.1
Latest release: over 1 year ago - 119 downloads - 801 dependencies
wilfriedguiblet/fraser v0.1

  • version: 1.14.0
Latest release: over 2 years ago - 27 downloads - 858 dependencies
daemontus/software-cell-oracle latest

  • version: 2.8.0
Latest release: about 2 years ago - 60 downloads - 1,013 dependencies
saulpierottiebi/biomart latest

  • version: 2.6.1
Latest release: about 2 years ago - 30 downloads - 360 dependencies
almahmoud/shiny-iseehub anvil

  • version: 2.9.1
Latest release: about 2 years ago - 35 downloads - 1,591 dependencies
joshuatobin257/drop latest

  • version: 2.8.0
Latest release: almost 2 years ago - 16 downloads - 840 dependencies
trust1/bethesda light

Brain tumor BethesdaV2 and EPIC (Bethesda v1) classifier box

  • version: 1.14.0
Latest release: about 2 years ago - 38 downloads - 840 dependencies
skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

  • version: 2.6.1
Latest release: over 2 years ago - 146 downloads - 1,722 dependencies
alexthiery/archr_macs2_seurat 3.0

  • version: 2.2.1
Latest release: about 2 years ago - 40 downloads - 801 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 2.6.0
Latest release: over 2 years ago - 21 downloads - 2,271 dependencies
ajhodgkinson/mitogwas latest

  • version: 2.8.0
Latest release: almost 2 years ago - 82 downloads - 1,094 dependencies
fgualdr/env_gsea latest

  • version: 2.6.0
Latest release: about 2 years ago - 47 downloads - 566 dependencies
maxfieldkelsey/snakesenescence latest

image for use in snakemake

  • version: 2.2.0
Latest release: over 2 years ago - 29 downloads - 494 dependencies
cplaisier/ccafv2_extra latest

  • version: 2.6.1
Latest release: almost 2 years ago - 28 downloads - 1,463 dependencies
alexthiery/archr_hicdc 3.0

  • version: 2.2.1
Latest release: about 2 years ago - 40 downloads - 822 dependencies
cmatkhan/llfs_rnaseq_latest latest

  • version: 2.4.0
Latest release: about 2 years ago - 46 downloads - 577 dependencies
rtibiocloud/neurogenomicslab_mungesumstats v1.7.10_6e16c82

  • version: 2.7.1
Latest release: over 1 year ago - 26 downloads - 1,293 dependencies
ericsalomaki/rnaseq_r4_2 latest

  • version: 2.6.0
Latest release: over 2 years ago - 48 downloads - 989 dependencies
kuglerf/tft_r v5

  • version: 2.6.1
Latest release: almost 2 years ago - 26 downloads - 812 dependencies
alexthiery/archr_dev_macs2 3.0

  • version: 2.2.1
Latest release: about 2 years ago - 33 downloads - 805 dependencies
costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

  • version: 2.9.1
Latest release: almost 2 years ago - 43 downloads - 2,685 dependencies
brianyee/surf b77fd94

  • version: 2.2.1
Latest release: about 2 years ago - 25 downloads - 2,629 dependencies
forest2000/seuratv5 latest

Update Seurat to version 5

  • version: 2.6.1
Latest release: almost 2 years ago - 28 downloads - 1,130 dependencies
btrspg/r-env cache

  • version: 2.8.0
Latest release: 4 months ago - 308 downloads - 2,231 dependencies