Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : Biobase

Explore the latest package usage data for Biobase in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 711
Total downloads: 3,113,357

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/scrna_downstream 1.1

  • version: 2.52.0
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
biocontainers/biosigner phenomenal-v2.2.8_cv1.4.26

Discovery of significant signatures from omics data.

  • version: 2.38.0
Latest release: over 6 years ago - 201 downloads - 240 dependencies
recetox/ramclustr 1.1.0-recetox0

  • version: 2.48.0
Latest release: about 4 years ago - 191 downloads - 593 dependencies
koki/biocdev 20230818

  • version: 2.61.0
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
anand7899/rmarkdown latest

  • version: 2.58.0
Latest release: about 2 years ago - 262 downloads - 766 dependencies
prismcmap/sushi develop

  • version: 2.50.0
Latest release: 10 months ago - 221 downloads - 723 dependencies
hoonbiolab/hmftools v1.1

  • version: 2.52.0
Latest release: about 3 years ago - 1,211 downloads - 693 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 2.54.0
Latest release: about 2 years ago - 172 downloads - 962 dependencies
biocontainers/bioconductor-rtracklayer v1.34.1-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 160 downloads - 427 dependencies
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 156 downloads - 572 dependencies
chgyi/bio 3.5.1

  • version: 2.40.0
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
canaantt/notitia-ocpu latest

This is part of zager/notitia.

  • version: 2.38.0
Latest release: almost 7 years ago - 153 downloads - 633 dependencies
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 155 downloads - 523 dependencies
biocontainers/bioconductor-summarizedexperiment v1.4.0-2-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 141 downloads - 407 dependencies
biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 139 downloads - 485 dependencies
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 140 downloads - 453 dependencies
biocontainers/bioconductor-metagenomeseq v1.16.0-2-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 138 downloads - 417 dependencies
biocontainers/bioconductor-altcdfenvs v1-2.36.0-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 139 downloads - 415 dependencies
biocontainers/bioconductor-annotationhub v2.6.4-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 139 downloads - 459 dependencies
biocontainers/bioconductor-genefilter v1.56.0-1-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 133 downloads - 428 dependencies
biocontainers/bioconductor-annotationdbi v1.36.1-2-deb_cv1

  • version: 2.34.0
Latest release: over 6 years ago - 134 downloads - 416 dependencies
chgyi/metaware_rna_denovo latest

  • version: 2.42.0
Latest release: over 5 years ago - 132 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 2.40.0
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 2.40.0
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
recetox/xmsannotator latest

  • version: 2.48.0
Latest release: over 3 years ago - 113 downloads - 448 dependencies
dhspence/docker-hiccompare latest

  • version: 2.46.0
Latest release: over 3 years ago - 113 downloads - 1,271 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 2.53.0
Latest release: about 3 years ago - 111 downloads - 2,087 dependencies
atttilacs/dsp_geomxtools latest

  • version: 2.54.0
Latest release: about 2 years ago - 114 downloads - 871 dependencies
kcapd/wings-genomics latest

WINGS workflow system with software for genomics operations.

  • version: 2.34.0
Latest release: about 4 years ago - 103 downloads - 1,468 dependencies
atttilacs/seurat_big latest

  • version: 2.54.0
Latest release: almost 2 years ago - 495 downloads - 997 dependencies
recetox/recetox-xmsannotator october-conda0

  • version: 2.52.0
Latest release: about 3 years ago - 95 downloads - 484 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 2.40.0
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 2.54.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
crukmi/mesa main

  • version: 2.57.1
Latest release: about 2 years ago - 91 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 2.54.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
tercen/flowsom_mst 0.1.6

  • version: 2.50.0
Latest release: about 3 years ago - 88 downloads - 787 dependencies
veitveit/isoprot latest

  • version: 2.42.0
Latest release: over 5 years ago - 86 downloads - 2,182 dependencies
gene110/reportnipt550 latest

  • version: 2.46.0
Latest release: over 3 years ago - 88 downloads - 577 dependencies
veitveit/compomicsworkflow dev

  • version: 2.50.0
Latest release: almost 4 years ago - 80 downloads - 537 dependencies
mlepetit/ranalysis 3.3.4

  • version: 2.52.0
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
tercen/flowsuite 0.0.4

  • version: 2.50.0
Latest release: over 2 years ago - 99 downloads - 1,512 dependencies
dolphinnext/ont_variant_calling 1.0

  • version: 2.58.0
Latest release: almost 2 years ago - 80 downloads - 494 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 2.58.0
Latest release: almost 2 years ago - 75 downloads - 382 dependencies
hdsu/etbii2023 latest

  • version: 2.54.0
Latest release: almost 2 years ago - 73 downloads - 358 dependencies
vanessa/rstudio-neuro latest

Dockerized rstudio with some statistics and neuro packages!

  • version: 2.38.0
Latest release: almost 7 years ago - 66 downloads - 199 dependencies
chriswyatt/goatee_biomart latest

  • version: 2.54.0
Latest release: almost 3 years ago - 95 downloads - 229 dependencies
qdidiscoveryservices/quantiseqr v1

  • version: 2.55.0
Latest release: over 2 years ago - 65 downloads - 1,201 dependencies
koki/rstudio_mesh latest

  • version: 2.55.0
Latest release: about 3 years ago - 67 downloads - 1,389 dependencies
ccdlstaging/dr_common_tests 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 2.38.0
Latest release: 12 months ago - 710 downloads - 784 dependencies
tercen/flowsom_operator 1.6.0

  • version: 2.56.0
Latest release: almost 2 years ago - 105 downloads - 1,563 dependencies
intelliseqngs/task_bam-exon-depth 1.0.4

  • version: 2.46.0
Latest release: over 2 years ago - 67 downloads - 547 dependencies
koki/annotationhub 20210323

  • version: 2.50.0
Latest release: over 3 years ago - 73 downloads - 1,250 dependencies
qdidiscoveryservices/ssgsea 1.0

  • version: 2.58.0
Latest release: almost 2 years ago - 65 downloads - 665 dependencies
sktrinh12/romiq-ctnr latest

r instance for testing

  • version: 2.46.0
Latest release: almost 4 years ago - 59 downloads - 1,195 dependencies
millerh1/ste v1.0

  • version: 2.58.0
Latest release: almost 2 years ago - 9,929 downloads - 844 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 2.46.0
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 2.54.0
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
lorentzb/gene8940_r 1.0

  • version: 2.58.0
Latest release: almost 2 years ago - 55 downloads - 926 dependencies
dhspence/docker-vep 93

  • version: 2.40.0
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 2.40.0
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
qdidiscoveryservices/bam_to_10x_counts_pandoc latest

  • version: 2.54.0
Latest release: almost 2 years ago - 51 downloads - 964 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 2.58.0, 2.46.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
koki/trybioworkshop sha-07d5fb0

  • version: 2.53.0
Latest release: about 3 years ago - 49 downloads - 1,175 dependencies
maestsi/nf-m6anet v1

  • version: 2.50.0
Latest release: almost 2 years ago - 54 downloads - 645 dependencies
ccdlstaging/dr_downloader latest

  • version: 2.38.0
Latest release: over 6 years ago - 47 downloads - 663 dependencies
khoulaha/jabba v1.0.0

  • version: 2.58.0
Latest release: almost 2 years ago - 42 downloads - 2,527 dependencies
tercen/debarcoding_cytof_operator 0.3.0

  • version: 2.56.0
Latest release: over 1 year ago - 109 downloads - 1,659 dependencies
koki/tensor-projects-machima 20220827

  • version: 2.56.0
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
hoonbiolab/pepatac v1.1

  • version: 2.52.0
Latest release: about 3 years ago - 43 downloads - 1,213 dependencies
mbwali/jupyterlab qiime2023

  • version: 2.58.0
Latest release: over 1 year ago - 56 downloads - 1,941 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 2.40.0
Latest release: over 6 years ago - 42 downloads - 9,405 dependencies
qdidiscoveryservices/batch_correction latest

  • version: 2.48.0
Latest release: almost 4 years ago - 40 downloads - 790 dependencies
crukmi/mesa_dependencies latest

  • version: 2.58.0
Latest release: over 1 year ago - 63 downloads - 1,393 dependencies
broadcptacdev/panoply_so_nmf_report 9bb503e

  • version: 2.46.0
Latest release: over 1 year ago - 95 downloads - 725 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 2.50.0
Latest release: over 1 year ago - 48 downloads - 912 dependencies
veitveit/isoptmprot latest

  • version: 2.44.0
Latest release: over 5 years ago - 38 downloads - 2,207 dependencies
koki/urchin_workflow_seurat 20230616

  • version: 2.58.0
Latest release: over 1 year ago - 63 downloads - 1,471 dependencies
veitveit/coexpresso latest

  • version: 2.54.0
Latest release: over 2 years ago - 39 downloads - 1,733 dependencies
koki/tensor-projects-parasite 20220819

  • version: 2.56.0
Latest release: over 2 years ago - 43 downloads - 1,281 dependencies
tercen/opencyto_operator latest

  • version: 2.50.0
Latest release: over 2 years ago - 35 downloads - 1,514 dependencies
tercen/xshift 0.0.6

  • version: 2.50.0
Latest release: over 3 years ago - 37 downloads - 826 dependencies
austinhpatton123/uniprotws_2.38.1 0.0.1

  • version: 2.58.0
Latest release: over 1 year ago - 35 downloads - 580 dependencies
dmiller15/minfi 4.2.0

  • version: 2.56.0
Latest release: over 2 years ago - 35 downloads - 1,415 dependencies
kcapd/wings-genomics-full latest

  • version: 2.34.0
Latest release: almost 4 years ago - 33 downloads - 1,502 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 2.46.0
Latest release: almost 5 years ago - 34 downloads - 10,669 dependencies
gesiscss/binder-uw-2dmadison-2ddatascience-2dotu-2dvignette-f2459f 84607c79642d786c08b1d37ac66e84d6d35b38de

  • version: 2.46.0
Latest release: almost 5 years ago - 37 downloads - 2,082 dependencies
bryanfisk/capybara latest

  • version: 2.54.0
Latest release: almost 2 years ago - 35 downloads - 1,067 dependencies
biocontainers/ecomet phenomenal-v1.1_cv0.3.39

  • version: 2.38.0
Latest release: over 6 years ago - 32 downloads - 647 dependencies
hoonbiolab/variantannotation_r v1.1

  • version: 2.46.0
Latest release: about 3 years ago - 36 downloads - 828 dependencies
chriswyatt/chopgo latest

  • version: 2.54.0
Latest release: about 2 years ago - 39 downloads - 255 dependencies
evolbioinfo/r-sra v3.6.1

  • version: 2.44.0
Latest release: over 5 years ago - 31 downloads - 466 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 2.40.0
Latest release: over 6 years ago - 29 downloads - 9,414 dependencies
robsyme/cosmo latest

  • version: 2.58.0
Latest release: almost 2 years ago - 29 downloads - 543 dependencies
qdidiscoveryservices/glimma 4.2.0

  • version: 2.56.0
Latest release: over 2 years ago - 69 downloads - 1,371 dependencies
chriswyatt/svm1071deseq2limma latest

  • version: 2.54.0
Latest release: almost 3 years ago - 29 downloads - 327 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 2.58.0
Latest release: almost 2 years ago - 35 downloads - 897 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 2.48.0
Latest release: about 4 years ago - 31 downloads - 588 dependencies