broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

rocker/geospatial 4.3.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

veupathdb/rserve 7

ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c

ashish1981/x86-r-z-appln latest

broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

ashish1981/shinyapp-sarb latest

broadinstitute/terra-jupyter-aou 8bf6b13

ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

rocker/binder 4.3.2

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

nfcore/methylseq dev

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

rocker/ropensci latest

ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30

nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

nfcore/chipseq dev

A docker image for nf-core/chipseq

ashish1981/s390x-r-appln-z latest

180a51c0/gh-action-buildapp latest

dhspence/docker-basespace_chromoseq latest

nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

rocker/r-parallel 1.0.1

rocker/ml-verse 4.3.2

mirekphd/ml-cpu-r40-rs-cust 20230912

dhspence/docker-genomic-analysis 122121

From Chris Miller's example

mirekphd/ml-cpu-r36-rs-cust latest

ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c

ashish1981/zreferenceimplementation d17052022

ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18

vanallenlab/sv-pipeline filter_gt_029fa3b

nfcore/ampliseq dev

A Docker image for nf-core/ampliseq.

rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

rocker/r-rmd latest

Rocker container for Rmarkdown packages

artemklevtsov/r-alpine pkgdev

R docker images based on the alpine:latest

mirekphd/ml-cpu-r36-base latest

ashish1981/s390x-r-shiny latest

gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

mesosphere/mesosphere-data-toolkit latest

biocontainers/imputeme vv1.0.7_cv1

biocontainers/isee-galaxy v3.13_cv1.0.0

rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

ccdlstaging/dr_smasher 549216c6fa7f6c80a5d78287c8814330f150428c

qdidiscoveryservices/ms_pipeline latest

ocdr/dkube-datascience-rs-sk-cpu-multiuser v1.1.1-tiji-test

ocdr/dkube-datascience-rs-tf-cpu v2.0.0-tiji-test

ashish1981/s390x-clefos-shiny latest

ccdlstaging/dr_illumina 549216c6fa7f6c80a5d78287c8814330f150428c

ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.9-18

patroonorg/patroondeps latest

gesiscss/binder-gesiscss-2dsmm-5fdemo-236470 dfd722278551f17b42f226ab5a196b2b4c58e298

ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-18

rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

ashish1981/x86-rbase-shiny-plumber d300422

gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

broadinstitute/terra-jupyter-gatk 8444561

mesosphere/mesosphere-jupyter-service latest

dhspence/docker-biscuit latest

dragonflyscience/niwaverse 2020-08-11

ccdlstaging/dr_compendia 549216c6fa7f6c80a5d78287c8814330f150428c

rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

tercen/dartrusttidy travis-17

gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

dragonflyscience/dragonverse-18.04 latest

afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

kbase/narrprereq 1.3

Narrative prerequisite base image (used by kbase/narrabase).

kbase/metrics latest

ocdr/dkube-datascience-rs-tf-gpu v2.0.0-tiji-test

nfcore/airrflowreport dev

dragonflyscience/sharknado 2023-07-23

recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

biocontainers/ipo develop

A Tool for automated Optimization of XCMS Parameters

kbase/errorlogging develop

nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

afcai2c/python-r-ai latest

Image with Python and R packages

gesiscss/binder-lmartinoty-2dlmartinoty-e3b0bd c626ad4bba1c566a8af5d745f4386d02e9fe9b44

tercen/runtime-r40 4.0.4-6

nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

intelliseqngs/gatk-4.1.7.0-hg38 1.0.1

nfcore/slamseq dev

A docker image for nf-core/slamseq

nfcore/hic dev

A docker container for the nf-core/hic pipeline.

intelliseqngs/gatk-4.1.7.0 1.0.4

nfcore/nanoseq dev

Nanopore demultiplexing, QC and alignment pipeline

intelliseqngs/task_bam-metrics 1.2.8

nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

nfcore/diaproteomics dev

A Docker container for nf-core/diaproteomics

intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

intelliseqngs/gatk-4.1.6.0 2.0.2

intelliseqngs/task_vcf-uniq 1.0.0