snakemake/snakemake-tutorial : stable
A container for running the official Snakemake tutorial
Latest release: 5 months ago - 15,437 downloads - 346 dependencies
JSONDependencies
- debian/libblkid1 2.33.1-0.1
- debian/adduser 3.118
- debian/apt 1.8.2.3
- debian/base-files 10.3 deb10u12
- debian/base-passwd 3.5.46
- debian/bash 5.0-4
- debian/bsdutils 1:2.33.1-0.1
- debian/bzip2 1.0.6-9.2~deb10u1
- debian/ca-certificates 20200601~deb10u2
- debian/coreutils 8.30-3
- debian/curl 7.64.0-4 deb10u2
- debian/dash 0.5.10.2-5
- debian/debconf 1.5.71 deb10u1
- debian/debian-archive-keyring 2019.1 deb10u1
- debian/debianutils 4.8.6.1
- debian/diffutils 1:3.7-3
- debian/dirmngr 2.2.12-1 deb10u1
- debian/dpkg 1.19.7
- debian/fdisk 2.33.1-0.1
- debian/findutils 4.6.0 git 20190209-2
- debian/gcc-8-base 8.3.0-6
- debian/git-man 1:2.20.1-2 deb10u3
- debian/git 1:2.20.1-2 deb10u3
- debian/gnupg-l10n 2.2.12-1 deb10u1
- debian/gnupg-utils 2.2.12-1 deb10u1
- debian/gnupg2 2.2.12-1 deb10u1
- debian/gnupg 2.2.12-1 deb10u1
- debian/gpg-agent 2.2.12-1 deb10u1
- debian/gpg-wks-client 2.2.12-1 deb10u1
- debian/gpg-wks-server 2.2.12-1 deb10u1
- debian/gpg 2.2.12-1 deb10u1
- debian/gpgconf 2.2.12-1 deb10u1
- debian/gpgsm 2.2.12-1 deb10u1
- debian/gpgv 2.2.12-1 deb10u1
- debian/grep 3.3-1
- debian/gzip 1.9-3 deb10u1
- debian/hostname 3.21
- debian/init-system-helpers 1.56 nmu1
- debian/insserv 1.18.0-2
- debian/libacl1 2.2.53-4
- debian/libapt-pkg5.0 1.8.2.3
- debian/libassuan0 2.5.2-1
- debian/libattr1 1:2.4.48-4
- debian/libaudit-common 1:2.8.4-3
- debian/libaudit1 1:2.8.4-3
- debian/libbz2-1.0 1.0.6-9.2~deb10u1
- debian/libc-bin 2.28-10 deb10u1
- debian/libc6 2.28-10 deb10u1
- debian/libcap-ng0 0.7.9-2
- debian/libcom-err2 1.44.5-1 deb10u3
- debian/libcurl3-gnutls 7.64.0-4 deb10u2
- debian/libcurl4 7.64.0-4 deb10u2
- debian/libdb5.3 5.3.28 dfsg1-0.5
- debian/libdebconfclient0 0.249
- debian/liberror-perl 0.17027-2
- debian/libexpat1 2.2.6-2 deb10u4
- debian/libfdisk1 2.33.1-0.1
- debian/libffi6 3.2.1-9
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- debian/libgcrypt20 1.8.4-5 deb10u1
- debian/libgdbm-compat4 1.18.1-4
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- debian/libgnutls30 3.6.7-4 deb10u7
- debian/libgpg-error0 1.35-1
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- debian/libhogweed4 3.4.1-1 deb10u1
- debian/libidn2-0 2.0.5-1 deb10u1
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- debian/libkeyutils1 1.6-6
- debian/libkrb5-3 1.17-3 deb10u3
- debian/libkrb5support0 1.17-3 deb10u3
- debian/libksba8 1.3.5-2
- debian/libldap-2.4-2 2.4.47 dfsg-3 deb10u6
- debian/libldap-common 2.4.47 dfsg-3 deb10u6
- debian/liblz4-1 1.8.3-1 deb10u1
- debian/liblzma5 5.2.4-1 deb10u1
- debian/liblzo2-2 2.10-0.1
- debian/libmount1 2.33.1-0.1
- debian/libncursesw6 6.1 20181013-2 deb10u2
- debian/libnettle6 3.4.1-1 deb10u1
- debian/libnghttp2-14 1.36.0-2 deb10u1
- debian/libnpth0 1.6-1
- debian/libp11-kit0 0.23.15-2 deb10u1
- debian/libpam-modules-bin 1.3.1-5
- debian/libpam-modules 1.3.1-5
- debian/libpam-runtime 1.3.1-5
- debian/libpam0g 1.3.1-5
- debian/libpcre2-8-0 10.32-5
- debian/libpcre3 2:8.39-12
- debian/libperl5.28 5.28.1-6 deb10u1
- debian/libpsl5 0.20.2-2
- debian/libreadline7 7.0-5
- debian/librtmp1 2.4 20151223.gitfa8646d.1-2
- debian/libsasl2-2 2.1.27 dfsg-1 deb10u2
- debian/libsasl2-modules-db 2.1.27 dfsg-1 deb10u2
- debian/libseccomp2 2.3.3-4
- debian/libselinux1 2.8-1 b1
- debian/libsemanage-common 2.8-2
- debian/libsemanage1 2.8-2
- debian/libsepol1 2.8-1
- debian/libsmartcols1 2.33.1-0.1
- debian/libsqlite3-0 3.27.2-3 deb10u1
- debian/libssh2-1 1.8.0-2.1
- debian/libssl1.1 1.1.1n-0 deb10u1
- debian/libstdc 6 8.3.0-6
- debian/libsystemd0 241-7~deb10u8
- debian/libtasn1-6 4.13-3
- debian/libtinfo6 6.1 20181013-2 deb10u2
- debian/libudev1 241-7~deb10u8
- debian/libunistring2 0.9.10-1
- debian/libuuid1 2.33.1-0.1
- debian/libzstd1 1.3.8 dfsg-3 deb10u2
- debian/login 1:4.5-1.1
- debian/lsb-base 10.2019051400
- debian/mawk 1.3.3-17 b3
- debian/mount 2.33.1-0.1
- debian/ncurses-base 6.1 20181013-2 deb10u2
- debian/openssl 1.1.1n-0 deb10u1
- debian/passwd 1:4.5-1.1
- debian/perl-base 5.28.1-6 deb10u1
- debian/perl-modules-5.28 5.28.1-6 deb10u1
- debian/perl 5.28.1-6 deb10u1
- debian/pinentry-curses 1.1.0-2
- debian/readline-common 7.0-5
- debian/sed 4.7-1
- debian/squashfs-tools 1:4.3-12 deb10u2
- debian/startpar 0.61-1
- debian/sysv-rc 2.93-8
- debian/sysvinit-utils 2.93-8
- debian/tar 1.30 dfsg-6
- debian/tzdata 2021a-0 deb10u3
- debian/util-linux 2.33.1-0.1
- debian/wget 1.20.1-1.1
- debian/zlib1g 1:1.2.11.dfsg-1 deb10u1
- github.com/containerd/cgroups v1.0.1
- github.com/containerd/containerd v1.5.8
- github.com/containernetworking/cni (devel)
- github.com/BurntSushi/toml v0.4.1
- github.com/VividCortex/ewma v1.2.0
- github.com/acarl005/stripansi v0.0.0-20180116102854-5a71ef0e047d
- github.com/alexflint/go-filemutex v1.1.0
- github.com/apex/log v1.9.0
- github.com/beorn7/perks v1.0.1
- github.com/blang/semver/v4 v4.0.0
- github.com/cespare/xxhash/v2 v2.1.1
- github.com/containernetworking/cni v0.8.1
- github.com/containernetworking/cni v1.0.1
- github.com/containernetworking/plugins (devel)
- github.com/containernetworking/plugins v0.9.1
- github.com/containers/image/v5 v5.17.0
- github.com/containers/libtrust v0.0.0-20190913040956-14b96171aa3b
- github.com/containers/ocicrypt v1.1.2
- github.com/containers/storage v1.37.0
- github.com/coreos/go-iptables v0.5.0
- github.com/coreos/go-iptables v0.6.0
- github.com/coreos/go-systemd/v22 v22.3.2
- github.com/cpuguy83/go-md2man/v2 v2.0.0
- github.com/creack/pty v1.1.15
- github.com/cyphar/filepath-securejoin v0.2.3
- github.com/d2g/dhcp4 v0.0.0-20170904100407-a1d1b6c41b1c
- github.com/d2g/dhcp4client v1.0.0
- github.com/docker/cli v20.10.11 incompatible
- github.com/docker/distribution v2.7.1 incompatible
- github.com/docker/docker-credential-helpers v0.6.4
- github.com/docker/docker v20.10.11 incompatible
- github.com/docker/go-connections v0.4.0
- github.com/docker/go-metrics v0.0.1
- github.com/docker/go-units v0.4.0
- github.com/fatih/color v1.12.0
- github.com/ghodss/yaml v1.0.0
- github.com/go-log/log v0.2.0
- github.com/godbus/dbus/v5 v5.0.4
- github.com/gogo/protobuf v1.3.2
- github.com/golang/protobuf v1.5.2
- github.com/google/uuid v1.3.0
- github.com/gorilla/mux v1.8.0
- github.com/gorilla/websocket v1.4.2
- github.com/hashicorp/errwrap v1.0.0
- github.com/hashicorp/go-multierror v1.1.1
- github.com/hpcng/golang-x-crypto v0.0.0-20210830200829-e6b35e3fb874
- github.com/hpcng/sif v1.6.0
- github.com/hpcng/singularity (devel)
- github.com/j-keck/arping v1.0.2
- github.com/klauspost/compress v1.13.6
- github.com/klauspost/pgzip v1.2.5
- github.com/kr/pty v1.1.8
- github.com/mattn/go-colorable v0.1.8
- github.com/mattn/go-isatty v0.0.12
- github.com/mattn/go-runewidth v0.0.13
- github.com/mattn/go-shellwords v1.0.12
- github.com/matttproud/golang_protobuf_extensions v1.0.2-0.20181231171920-c182affec369
- github.com/miekg/pkcs11 v1.0.3
- github.com/moby/locker v1.0.1
- github.com/moby/sys/mountinfo v0.4.1
- github.com/moby/term v0.0.0-20200312100748-672ec06f55cd
- github.com/morikuni/aec v1.0.0
- github.com/opencontainers/go-digest v1.0.0
- github.com/opencontainers/image-spec v1.0.2-0.20211117181255-693428a734f5
- github.com/opencontainers/runc v1.0.2
- github.com/opencontainers/runtime-spec v1.0.3-0.20210326190908-1c3f411f0417
- github.com/opencontainers/selinux v1.10.0
- github.com/opencontainers/umoci v0.4.7
- github.com/pelletier/go-toml v1.9.3
- github.com/pkg/errors v0.9.1
- github.com/prometheus/client_golang v1.7.1
- github.com/prometheus/client_model v0.2.0
- github.com/prometheus/common v0.10.0
- github.com/prometheus/procfs v0.6.0
- github.com/rivo/uniseg v0.2.0
- github.com/rootless-containers/proto v0.1.0
- github.com/russross/blackfriday/v2 v2.1.0
- github.com/safchain/ethtool v0.0.0-20190326074333-42ed695e3de8
- github.com/safchain/ethtool v0.0.0-20210803160452-9aa261dae9b1
- github.com/satori/go.uuid v1.2.1-0.20180404165556-75cca531ea76
- github.com/seccomp/containers-golang v0.6.0
- github.com/seccomp/libseccomp-golang v0.9.1
- github.com/sirupsen/logrus v1.8.1
- github.com/spf13/cobra v1.2.1
- github.com/spf13/pflag v1.0.5
- github.com/stefanberger/go-pkcs11uri v0.0.0-20201008174630-78d3cae3a980
- github.com/sylabs/json-resp v0.8.0
- github.com/sylabs/scs-build-client v0.2.1
- github.com/sylabs/scs-key-client v0.6.2
- github.com/sylabs/scs-library-client v1.0.5
- github.com/syndtr/gocapability v0.0.0-20200815063812-42c35b437635
- github.com/ulikunitz/xz v0.5.10
- github.com/urfave/cli v1.22.5
- github.com/vbatts/go-mtree v0.5.0
- github.com/vbatts/tar-split v0.11.2
- github.com/vbauerster/mpb/v4 v4.12.2
- github.com/vbauerster/mpb/v6 v6.0.4
- github.com/vbauerster/mpb/v7 v7.1.5
- github.com/vishvananda/netlink v1.1.1-0.20201029203352-d40f9887b852
- github.com/vishvananda/netlink v1.1.1-0.20210330154013-f5de75959ad5
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- github.com/vishvananda/netns v0.0.0-20210104183010-2eb08e3e575f
- go.etcd.io/bbolt v1.3.6
- go.mozilla.org/pkcs7 v0.0.0-20200128120323-432b2356ecb1
- golang.org/x/net v0.0.0-20211112202133-69e39bad7dc2
- golang.org/x/sync v0.0.0-20210220032951-036812b2e83c
- golang.org/x/sys v0.0.0-20210809222454-d867a43fc93e
- golang.org/x/sys v0.0.0-20211004093028-2c5d950f24ef
- golang.org/x/term v0.0.0-20210916214954-140adaaadfaf
- golang.org/x/text v0.3.7
- google.golang.org/genproto v0.0.0-20211005153810-c76a74d43a8e
- google.golang.org/grpc v1.41.0
- google.golang.org/protobuf v1.27.1
- gopkg.in/square/go-jose.v2 v2.5.1
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- mvdan.cc/sh/v3 v3.4.3-0.20220202175809-113ed667a8a7
- oras.land/oras-go v1.0.0
- MarkupSafe 2.1.1
- Pillow 9.1.0
- ConfigArgParse 1.5.3
- GitPython 3.1.27
- Jinja2 3.1.1
- PuLP 2.6.0
- PyNaCl 1.5.0
- PyQt5 5.12.3
- PyQt5_sip 4.19.18
- PyQtChart 5.12
- PyQtWebEngine 5.12.1
- PySocks 1.7.1
- PyYAML 6.0
- Pygments 2.11.2
- aioeasywebdav 2.4.0
- aiohttp 3.8.1
- aiosignal 1.2.0
- amply 0.1.4
- apipkg 2.0.0
- appdirs 1.4.4
- async-timeout 4.0.2
- attmap 0.13.2
- attrs 21.4.0
- backports.functools-lru-cache 1.6.4
- bcrypt 3.2.0
- boto3 1.21.45
- botocore 1.24.45
- brotlipy 0.7.0
- cachetools 5.0.0
- certifi 2021.10.8
- cffi 1.15.0
- charset-normalizer 2.0.12
- colorama 0.4.4
- conda-package-handling 1.8.0
- conda 4.12.0
- connection-pool 0.0.3
- cryptography 36.0.2
- cycler 0.11.0
- datrie 0.8.2
- decorator 5.1.1
- defusedxml 0.7.1
- docutils 0.18.1
- dropbox 11.29.0
- fastjsonschema 2.15.3
- filechunkio 1.8
- filelock 3.6.0
- fonttools 4.33.1
- frozenlist 1.3.0
- ftputil 5.0.3
- gitdb 4.0.9
- google-api-core 2.5.0
- google-api-python-client 2.45.0
- google-auth-httplib2 0.1.0
- google-auth 2.6.6
- google-cloud-core 2.2.2
- google-cloud-storage 2.1.0
- google-crc32c 1.1.2
- google-resumable-media 2.1.0
- googleapis-common-protos 1.56.0
- grpcio 1.45.0
- httplib2 0.20.4
- idna 3.3
- importlib-metadata 4.11.3
- importlib-resources 5.7.1
- iniconfig 1.1.1
- jmespath 1.0.0
- jsonschema 4.4.0
- jupyter-core 4.9.2
- kiwisolver 1.4.2
- libmambapy 0.22.1
- logmuse 0.2.6
- mamba 0.22.1
- matplotlib 3.5.1
- multidict 6.0.2
- nbformat 5.3.0
- numpy 1.22.3
- oauth2client 4.1.3
- packaging 21.3
- pandas 1.4.2
- paramiko 2.10.3
- peppy 0.31.2
- pip 22.0.4
- plac 1.3.5
- pluggy 1.0.0
- ply 3.11
- prettytable 3.2.0
- protobuf 3.20.0rc2
- psutil 5.9.0
- py 1.11.0
- pyOpenSSL 22.0.0
- pyasn1-modules 0.2.7
- pyasn1 0.4.8
- pycosat 0.6.3
- pycparser 2.21
- pyparsing 3.0.8
- pyrsistent 0.18.1
- pysam 0.19.0
- pysftp 0.2.9
- pytest 7.1.1
- python-dateutil 2.8.2
- python-irodsclient 1.1.3
- pytz 2022.1
- pyu2f 0.1.5
- ratelimiter 1.2.0
- requests 2.27.1
- retry 0.9.2
- rsa 4.8
- ruamel-yaml-conda 0.15.80
- s3transfer 0.5.2
- setuptools 60.10.0
- setuptools 62.1.0
- six 1.16.0
- slacker 0.14.0
- smart-open 5.2.1
- smmap 3.0.5
- snakemake 7.3.8
- snakemake 7.4.0 0.g3c51aa26.dirty
- stone 3.3.1
- stopit 1.1.2
- tabulate 0.8.9
- tomli 2.0.1
- toposort 1.7
- tornado 6.1
- tqdm 4.63.0
- traitlets 5.1.1
- typing_extensions 4.2.0
- ubiquerg 0.6.1
- unicodedata2 14.0.0
- uritemplate 4.1.1
- urllib3 1.26.9
- veracitools 0.1.3
- wcwidth 0.2.5
- wheel 0.37.1
- wrapt 1.14.0
- yarl 1.7.2
- yte 1.2.2
- zipp 3.8.0
Distribution Information
- Pretty Name
Debian GNU/Linux 10 (buster)- Name
Debian GNU/Linux- Id
debian- Version
10 (buster)- Version
10- Version Codename
buster- Home Url
https://www.debian.org/- Support Url
https://www.debian.org/support- Bug Report Url
https://bugs.debian.org/