Ecosyste.ms: Docker

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qxes4210/mimseq : double_result_page

This repo is for the mimseq web tool (tRNA analysis)

Latest release: about 1 year ago - 27 downloads - 386 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.60.0
BH 1.81.0-1
Biobase 2.58.0
BiocGenerics 0.44.0
BiocParallel 1.32.5
Biostrings 2.66.0
ComplexHeatmap 2.14.0
DBI 1.1.3
DESeq2 1.38.0
DelayedArray 0.24.0
GenomeInfoDb 1.34.9
GenomeInfoDbData 1.2.9
GenomicRanges 1.50.0
GetoptLong 1.0.5
GlobalOptions 0.1.2
IRanges 2.32.0
KEGGREST 1.38.0
MASS 7.3-60
Matrix 1.6-1
MatrixGenerics 1.10.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.10
RSQLite 2.3.1
Rcpp 1.0.11
RcppArmadillo 0.12.6.1.0
S4Vectors 0.36.0
SummarizedExperiment 1.28.0
XML 3.99-0.14
XVector 0.38.0
annotate 1.76.0
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.2.2
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
brew 1.0-8
brio 1.1.3
broom 1.0.5
bslib 0.5.1
cachem 1.0.8
calibrate 1.7.7
callr 3.7.3
cellranger 1.1.0
circlize 0.4.15
cli 3.6.1
clipr 0.8.0
clue 0.3-64
cluster 2.1.4
codetools 0.2-19
colorspace 2.1-0
commonmark 1.9.0
compiler 4.2.2
cpp11 0.4.6
crayon 1.5.2
credentials 1.3.2
curl 4.3.3
data.table 1.14.8
datasets 4.2.2
dbplyr 2.3.3
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.33
doParallel 1.0.17
downlit 0.4.3
dplyr 1.1.2
dtplyr 1.3.1
ellipsis 0.3.2
evaluate 0.21
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
fontawesome 0.5.2
forcats 1.0.0
foreach 1.5.2
formatR 1.14
fs 1.6.3
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.5.2
genefilter 1.80.0
geneplotter 1.76.0
generics 0.1.3
gert 1.9.2
ggplot2 3.4.3
ggpol 0.0.7
gh 1.4.0
gitcreds 0.1.2
glue 1.6.2
googledrive 2.1.1
googlesheets4 1.1.1
grDevices 4.2.2
graphics 4.2.2
grid 4.2.2
gridExtra 2.3
gtable 0.3.4
haven 2.5.3
highr 0.10
hms 1.1.3
htmltools 0.5.6
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.7
ids 1.0.1
ini 0.3.1
isoband 0.2.7
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.8.7
knitr 1.43
labeling 0.4.2
lambda.r 1.2.4
later 1.3.1
lattice 0.21-8
lifecycle 1.0.3
locfit 1.5-9.8
lubridate 1.9.2
magrittr 2.0.3
matrixStats 1.0.0
memoise 2.0.1
methods 4.2.2
mgcv 1.9-0
mime 0.12
miniUI 0.1.1.1
modelr 0.1.11
munsell 0.5.0
nlme 3.1-163
openssl 2.0.5
org.testing.db 0.1
parallel 4.2.2
pheatmap 1.0.12
pillar 1.9.0
pkgbuild 1.4.2
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2.1
plogr 0.2.0
plyr 1.8.8
png 0.1-8
praise 1.0.0
prettyunits 1.1.1
processx 3.8.2
profvis 0.3.8
progress 1.2.2
promises 1.2.1
ps 1.7.5
purrr 1.0.1
ragg 1.2.4
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.4
readxl 1.4.3
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2.1
reprex 2.0.2
reshape2 1.4.4
rjson 0.2.21
rlang 1.1.1
rmarkdown 2.24
roxygen2 7.2.3
rprojroot 2.0.3
rstudioapi 0.15.0
rversions 2.1.2
rvest 1.0.3
sass 0.4.7
scales 1.2.1
selectr 0.4-2
sessioninfo 1.2.2
shape 1.4.6
shiny 1.7.5
snow 0.4-4
sourcetools 0.1.7-1
splines 4.2.2
stats4 4.2.2
stats 4.2.2
stringi 1.7.12
stringr 1.5.0
survival 3.5-7
sys 3.4.2
systemfonts 1.0.4
tcltk 4.2.2
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.10
textshaping 0.3.6
tibble 3.2.1
tidyr 1.3.0
tidyselect 1.2.0
tidyverse 1.3.2
timechange 0.2.0
tinytex 0.46
tools 4.2.2
translations 4.2.2
tzdb 0.4.0
urlchecker 1.0.1
usethis 2.2.2
utf8 1.2.3
utils 4.2.2
uuid 1.1-0
uuid 1.1-1
vctrs 0.6.3
viridisLite 0.4.2
vroom 1.6.3
waldo 0.5.1
whisker 0.4.1
withr 2.5.0
xfun 0.40
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
zip 2.3.0
zlibbioc 1.44.0

ubuntu/adduser 3.118ubuntu5
ubuntu/apt 2.4.9
ubuntu/base-files 12ubuntu4.3
ubuntu/base-passwd 3.5.52build1
ubuntu/bash 5.1-6ubuntu1
ubuntu/bsdutils 1:2.37.2-4ubuntu3
ubuntu/ca-certificates 20230311ubuntu0.22.04.1
ubuntu/coreutils 8.32-4.1ubuntu1
ubuntu/cutadapt 3.5-1build1
ubuntu/dash 0.5.11 git20210903 057cd650a4ed-3build1
ubuntu/debconf 1.5.79ubuntu1
ubuntu/debianutils 5.5-1ubuntu2
ubuntu/diffutils 1:3.8-0ubuntu2
ubuntu/dpkg 1.21.1ubuntu2.2
ubuntu/e2fsprogs 1.46.5-2ubuntu1.1
ubuntu/findutils 4.8.0-1ubuntu3
ubuntu/gcc-12-base 12.1.0-2ubuntu1~22.04
ubuntu/gpgv 2.2.27-3ubuntu2.1
ubuntu/grep 3.7-1build1
ubuntu/gzip 1.10-4ubuntu4.1
ubuntu/hostname 3.23ubuntu2
ubuntu/htop 3.0.5-7build2
ubuntu/init-system-helpers 1.62
ubuntu/libacl1 2.3.1-1
ubuntu/libapt-pkg6.0 2.4.9
ubuntu/libattr1 1:2.5.1-1build1
ubuntu/libaudit-common 1:3.0.7-1build1
ubuntu/libaudit1 1:3.0.7-1build1
ubuntu/libblkid1 2.37.2-4ubuntu3
ubuntu/libbz2-1.0 1.0.8-5build1
ubuntu/libc-bin 2.35-0ubuntu3.1
ubuntu/libc6 2.35-0ubuntu3.1
ubuntu/libcap-ng0 0.7.9-2.2build3
ubuntu/libcap2 1:2.44-1ubuntu0.22.04.1
ubuntu/libcom-err2 1.46.5-2ubuntu1.1
ubuntu/libcrypt1 1:4.4.27-1
ubuntu/libdb5.3 5.3.28 dfsg1-0.8ubuntu3
ubuntu/libdebconfclient0 0.261ubuntu1
ubuntu/libexpat1 2.4.7-1ubuntu0.2
ubuntu/libext2fs2 1.46.5-2ubuntu1.1
ubuntu/libffi8 3.4.2-4
ubuntu/libgcc-s1 12.1.0-2ubuntu1~22.04
ubuntu/libgcrypt20 1.9.4-3ubuntu3
ubuntu/libgmp10 2:6.2.1 dfsg-3ubuntu1
ubuntu/libgnutls30 3.7.3-4ubuntu1.2
ubuntu/libgpg-error0 1.43-3
ubuntu/libgpm2 1.20.7-10build1
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ubuntu/libhogweed6 3.7.3-1build2
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ubuntu/liblz4-1 1.9.3-2build2
ubuntu/liblzma5 5.2.5-2ubuntu1
ubuntu/libmount1 2.37.2-4ubuntu3
ubuntu/libmpdec3 2.5.1-2build2
ubuntu/libncurses6 6.3-2ubuntu0.1
ubuntu/libncursesw6 6.3-2ubuntu0.1
ubuntu/libnettle8 3.7.3-1build2
ubuntu/libnl-3-200 3.5.0-0.1
ubuntu/libnl-genl-3-200 3.5.0-0.1
ubuntu/libnsl2 1.3.0-2build2
ubuntu/libp11-kit0 0.24.0-6build1
ubuntu/libpam-modules-bin 1.4.0-11ubuntu2.3
ubuntu/libpam-modules 1.4.0-11ubuntu2.3
ubuntu/libpam-runtime 1.4.0-11ubuntu2.3
ubuntu/libpam0g 1.4.0-11ubuntu2.3
ubuntu/libpcre2-8-0 10.39-3ubuntu0.1
ubuntu/libpcre3 2:8.39-13ubuntu0.22.04.1
ubuntu/libprocps8 2:3.3.17-6ubuntu2
ubuntu/libpsl5 0.21.0-1.2build2
ubuntu/libpython3-stdlib 3.10.6-1~22.04
ubuntu/libpython3.10-minimal 3.10.12-1~22.04.2
ubuntu/libpython3.10-stdlib 3.10.12-1~22.04.2
ubuntu/libpython3.10 3.10.12-1~22.04.2
ubuntu/libreadline8 8.1.2-1
ubuntu/libseccomp2 2.5.3-2ubuntu2
ubuntu/libselinux1 3.3-1build2
ubuntu/libsemanage-common 3.3-1build2
ubuntu/libsemanage2 3.3-1build2
ubuntu/libsepol2 3.3-1build1
ubuntu/libsmartcols1 2.37.2-4ubuntu3
ubuntu/libsodium23 1.0.18-1build2
ubuntu/libsqlite3-0 3.37.2-2ubuntu0.1
ubuntu/libss2 1.46.5-2ubuntu1.1
ubuntu/libssl3 3.0.2-0ubuntu1.10
ubuntu/libstdc 6 12.1.0-2ubuntu1~22.04
ubuntu/libsystemd0 249.11-0ubuntu3.9
ubuntu/libtasn1-6 4.18.0-4build1
ubuntu/libtinfo6 6.3-2ubuntu0.1
ubuntu/libtirpc-common 1.3.2-2ubuntu0.1
ubuntu/libtirpc3 1.3.2-2ubuntu0.1
ubuntu/libudev1 249.11-0ubuntu3.9
ubuntu/libunistring2 1.0-1
ubuntu/libuuid1 2.37.2-4ubuntu3
ubuntu/libxxhash0 0.8.1-1
ubuntu/libzstd1 1.4.8 dfsg-3build1
ubuntu/login 1:4.8.1-2ubuntu2.1
ubuntu/logsave 1.46.5-2ubuntu1.1
ubuntu/lsb-base 11.1.0ubuntu4
ubuntu/mawk 1.3.4.20200120-3
ubuntu/media-types 7.0.0
ubuntu/mount 2.37.2-4ubuntu3
ubuntu/ncurses-base 6.3-2ubuntu0.1
ubuntu/ncurses-bin 6.3-2ubuntu0.1
ubuntu/openssl 3.0.2-0ubuntu1.10
ubuntu/passwd 1:4.8.1-2ubuntu2.1
ubuntu/perl-base 5.34.0-3ubuntu1.2
ubuntu/pigz 2.6-1
ubuntu/procps 2:3.3.17-6ubuntu2
ubuntu/publicsuffix 20211207.1025-1
ubuntu/python3-cutadapt 3.5-1build1
ubuntu/python3-dnaio 0.7.1-1build1
ubuntu/python3-minimal 3.10.6-1~22.04
ubuntu/python3-pkg-resources 59.6.0-1.2ubuntu0.22.04.1
ubuntu/python3-xopen 1.2.1-4
ubuntu/python3.10-minimal 3.10.12-1~22.04.2
ubuntu/python3.10 3.10.12-1~22.04.2
ubuntu/python3 3.10.6-1~22.04
ubuntu/readline-common 8.1.2-1
ubuntu/sed 4.8-1ubuntu2
ubuntu/sensible-utils 0.0.17
ubuntu/sysvinit-utils 3.01-1ubuntu1
ubuntu/tar 1.34 dfsg-1ubuntu0.1.22.04.1
ubuntu/ubuntu-keyring 2021.03.26
ubuntu/unzip 6.0-26ubuntu3.1
ubuntu/usrmerge 25ubuntu2
ubuntu/util-linux 2.37.2-4ubuntu3
ubuntu/vim-common 2:8.2.3995-1ubuntu2.10
ubuntu/vim-runtime 2:8.2.3995-1ubuntu2.10
ubuntu/vim 2:8.2.3995-1ubuntu2.10
ubuntu/wget 1.21.2-2ubuntu1
ubuntu/xxd 2:8.2.3995-1ubuntu2.10
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu9.2

bash 5.1.16
python 3.7.12
python 3.7.16

edirect (devel)
github.com/fatih/color v1.12.0
github.com/gedex/inflector v0.0.0-20170307190818-16278e9db813
github.com/klauspost/cpuid v1.3.1
github.com/mattn/go-colorable v0.1.8
github.com/mattn/go-isatty v0.0.12
github.com/pbnjay/memory v0.0.0-20210728143218-7b4eea64cf58
github.com/rainycape/unidecode v0.0.0-20150907023854-cb7f23ec59be
github.com/surgebase/porter2 v0.0.0-20150829210152-56e4718818e8
golang.org/x/sys v0.0.0-20200223170610-d5e6a3e2c0ae
golang.org/x/text v0.3.7
stdlib 1.17

bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2

flask 1.1.1