nfcore/mhcquant : dev

A Docker image for nf-core/mhcquant

Latest release: almost 6 years ago - 6,317 downloads - 321 dependencies

JSON

Dependencies

debian/adduser 3.118
debian/apt 1.8.2.1
debian/base-files 10.3 deb10u6
debian/base-passwd 3.5.46
debian/bash 5.0-4
debian/bsdutils 1:2.33.1-0.1
debian/bzip2 1.0.6-9.2~deb10u1
debian/ca-certificates 20200601~deb10u1
debian/coreutils 8.30-3
debian/dash 0.5.10.2-5
debian/debconf 1.5.71
debian/debian-archive-keyring 2019.1
debian/debianutils 4.8.6.1
debian/diffutils 1:3.7-3
debian/dpkg 1.19.7
debian/e2fsprogs 1.44.5-1 deb10u3
debian/fdisk 2.33.1-0.1
debian/file 1:5.35-4 deb10u1
debian/findutils 4.6.0 git 20190209-2
debian/gcc-8-base 8.3.0-6
debian/git-man 1:2.20.1-2 deb10u3
debian/git 1:2.20.1-2 deb10u3
debian/gpgv 2.2.12-1 deb10u1
debian/grep 3.3-1
debian/gzip 1.9-3
debian/hostname 3.21
debian/init-system-helpers 1.56 nmu1
debian/krb5-locales 1.17-3 deb10u1
debian/less 487-0.1 b1
debian/libacl1 2.2.53-4
debian/libapr1 1.6.5-1 b1
debian/libaprutil1 1.6.1-4
debian/libapt-pkg5.0 1.8.2.1
debian/libattr1 1:2.4.48-4
debian/libaudit-common 1:2.8.4-3
debian/libaudit1 1:2.8.4-3
debian/libblkid1 2.33.1-0.1
debian/libbsd0 0.9.1-2
debian/libbz2-1.0 1.0.6-9.2~deb10u1
debian/libc-bin 2.28-10
debian/libc6 2.28-10
debian/libcap-ng0 0.7.9-2
debian/libcom-err2 1.44.5-1 deb10u3
debian/libcurl3-gnutls 7.64.0-4 deb10u1
debian/libdb5.3 5.3.28 dfsg1-0.5
debian/libdebconfclient0 0.249
debian/libedit2 3.1-20181209-1
debian/liberror-perl 0.17027-2
debian/libexpat1 2.2.6-2 deb10u1
debian/libext2fs2 1.44.5-1 deb10u3
debian/libfdisk1 2.33.1-0.1
debian/libffi6 3.2.1-9
debian/libgcc1 1:8.3.0-6
debian/libgcrypt20 1.8.4-5
debian/libgdbm-compat4 1.18.1-4
debian/libgdbm6 1.18.1-4
debian/libglib2.0-0 2.58.3-2 deb10u2
debian/libglib2.0-data 2.58.3-2 deb10u2
debian/libgmp10 2:6.1.2 dfsg-4
debian/libgnutls30 3.6.7-4 deb10u5
debian/libgpg-error0 1.35-1
debian/libgpm2 1.20.7-5
debian/libgssapi-krb5-2 1.17-3 deb10u1
debian/libhogweed4 3.4.1-1
debian/libice6 2:1.0.9-2
debian/libicu63 63.1-6 deb10u1
debian/libidn2-0 2.0.5-1 deb10u1
debian/libk5crypto3 1.17-3 deb10u1
debian/libkeyutils1 1.6-6
debian/libkrb5-3 1.17-3 deb10u1
debian/libkrb5support0 1.17-3 deb10u1
debian/libldap-2.4-2 2.4.47 dfsg-3 deb10u4
debian/libldap-common 2.4.47 dfsg-3 deb10u4
debian/liblz4-1 1.8.3-1
debian/liblzma5 5.2.4-1
debian/libmagic-mgc 1:5.35-4 deb10u1
debian/libmagic1 1:5.35-4 deb10u1
debian/libmount1 2.33.1-0.1
debian/libncurses6 6.1 20181013-2 deb10u2
debian/libncursesw6 6.1 20181013-2 deb10u2
debian/libnettle6 3.4.1-1
debian/libnghttp2-14 1.36.0-2 deb10u1
debian/libp11-kit0 0.23.15-2
debian/libpam-modules-bin 1.3.1-5
debian/libpam-modules 1.3.1-5
debian/libpam-runtime 1.3.1-5
debian/libpam0g 1.3.1-5
debian/libpcre2-8-0 10.32-5
debian/libpcre3 2:8.39-12
debian/libperl5.28 5.28.1-6 deb10u1
debian/libprocps7 2:3.3.15-2
debian/libpsl5 0.20.2-2
debian/libpython-stdlib 2.7.16-1
debian/libpython2-stdlib 2.7.16-1
debian/libpython2.7-minimal 2.7.16-2 deb10u1
debian/libpython2.7-stdlib 2.7.16-2 deb10u1
debian/libreadline7 7.0-5
debian/librtmp1 2.4 20151223.gitfa8646d.1-2
debian/libsasl2-2 2.1.27 dfsg-1 deb10u1
debian/libsasl2-modules-db 2.1.27 dfsg-1 deb10u1
debian/libsasl2-modules 2.1.27 dfsg-1 deb10u1
debian/libseccomp2 2.3.3-4
debian/libselinux1 2.8-1 b1
debian/libsemanage-common 2.8-2
debian/libsemanage1 2.8-2
debian/libsepol1 2.8-1
debian/libserf-1-1 1.3.9-7 b10
debian/libsm6 2:1.2.3-1
debian/libsmartcols1 2.33.1-0.1
debian/libsqlite3-0 3.27.2-3 deb10u1
debian/libss2 1.44.5-1 deb10u3
debian/libssh2-1 1.8.0-2.1
debian/libssl1.1 1.1.1d-0 deb10u3
debian/libstdc 6 8.3.0-6
debian/libsvn1 1.10.4-1 deb10u1
debian/libsystemd0 241-7~deb10u4
debian/libtasn1-6 4.13-3
debian/libtinfo6 6.1 20181013-2 deb10u2
debian/libudev1 241-7~deb10u4
debian/libunistring2 0.9.10-1
debian/libutf8proc2 2.3.0-1
debian/libuuid1 2.33.1-0.1
debian/libx11-6 2:1.6.7-1 deb10u1
debian/libx11-data 2:1.6.7-1 deb10u1
debian/libxau6 1:1.0.8-1 b2
debian/libxcb1 1.13.1-2
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxml2 2.9.4 dfsg1-7 deb10u1
debian/libxmuu1 2:1.1.2-2 b3
debian/libxrender1 1:0.9.10-1
debian/libzstd1 1.3.8 dfsg-3
debian/login 1:4.5-1.1
debian/lsb-base 10.2019051400
debian/mawk 1.3.3-17 b3
debian/mercurial-common 4.8.2-1 deb10u1
debian/mercurial 4.8.2-1 deb10u1
debian/mime-support 3.62
debian/mount 2.33.1-0.1
debian/ncurses-base 6.1 20181013-2 deb10u2
debian/ncurses-bin 6.1 20181013-2 deb10u2
debian/netbase 5.6
debian/openssh-client 1:7.9p1-10 deb10u2
debian/openssl 1.1.1d-0 deb10u3
debian/passwd 1:4.5-1.1
debian/patch 2.7.6-3 deb10u1
debian/perl-base 5.28.1-6 deb10u1
debian/perl-modules-5.28 5.28.1-6 deb10u1
debian/perl 5.28.1-6 deb10u1
debian/procps 2:3.3.15-2
debian/psmisc 23.2-1
debian/publicsuffix 20190415.1030-1
debian/python-minimal 2.7.16-1
debian/python2-minimal 2.7.16-1
debian/python2.7-minimal 2.7.16-2 deb10u1
debian/python2.7 2.7.16-2 deb10u1
debian/python2 2.7.16-1
debian/python 2.7.16-1
debian/readline-common 7.0-5
debian/sed 4.7-1
debian/sensible-utils 0.0.12
debian/shared-mime-info 1.10-1
debian/subversion 1.10.4-1 deb10u1
debian/sysvinit-utils 2.93-8
debian/tar 1.30 dfsg-6
debian/tzdata 2020d-0 deb10u1
debian/ucf 3.0038 nmu1
debian/util-linux 2.33.1-0.1
debian/wget 1.20.1-1.1
debian/x11-common 1:7.7 19
debian/xauth 1:1.0.10-1
debian/xdg-user-dirs 0.17-2
debian/xz-utils 5.2.4-1
debian/zlib1g 1:1.2.11.dfsg-1

java 11.0.8-internal 0-adhoc..src
python 2.7.15
python 3.8.5

Recalibration:Recalibration 1.0
canopus_predict_oss:canopus_predict_oss 1.1.3
ch.qos.logback:logback-classic 1.1.6
ch.qos.logback:logback-core 1.1.6
chemdb_file_oss:chemdb_file_oss 1.1.3
chemdb_rest_oss:chemdb_rest_oss 1.1.3
chemdb_sql_oss:chemdb_sql_oss 1.1.3
chemical_db_oss:chemical_db_oss 1.1.3
chemistry_base:chemistry_base 4.0.1
com.github.chhh:javolution-core-java-msftbx 6.11.3
com.github.chhh:msftbx 1.2.1-SNAPSHOT
com.github.davidmoten:guava-mini 0.1
com.github.davidmoten:rtree 0.8-RC10
com.github.davidmoten:rxjava-extras 0.7
com.github.oshi:oshi-core 3.4.4
com.google.classpath-explorer:classpath-explorer 1.0
com.google.code.gson:gson 2.6.2
com.google.guava:guava 18.0
com.google.guava:guava 21.0
com.ongres.scram:client 1.0.0-beta.2
com.ongres.scram:common 1.0.0-beta.2
com.sun.codemodel:codemodel 2.6
com.sun.istack:istack-commons-runtime 2.16
com.sun.istack:istack-commons-tools 2.16
com.sun.jna.platform:jna-platform 4.5.0
com.sun.jna:jna 4.5.0
com.sun.mail:javax.mail 1.5.2
com.sun.xml.dtd-parser:dtd-parser 1.2-SNAPSHOT
com.sun.xml.txw2:txw2 20110809
com.sun.xsom:xsom 20110809
com.sun:activation 1.1.1
commons-codec:commons-codec 1.7
commons-codec:commons-codec 1.9
commons-collections:commons-collections 3.2.2
commons-io:commons-io 2.4
commons-logging:commons-logging 1.2
de.unijena.bioinf:GraphUtils 1.1
de.unijena.bioinf:java-utilities 1.0-SNAPSHOT
edu.ucsd.msgf:MSGFPlus 1.0.0-SNAPSHOT
error-reporter:error-reporter 0.9.2
fingerblast_oss:fingerblast_oss 1.1.3
fingerid_db_oss:fingerid_db_oss 1.1.3
fingerid_utils_oss:fingerid_utils_oss 1.1.3
fingerprint_pvalues_oss:fingerprint_pvalues_oss 1.1.3
fingerprinter_oss:fingerprinter_oss 1.1.3
fragmentation_tree_construction:fragmentation_tree_construction 4.0.1
gibbs_sampling:gibbs_sampling 4.0.1
glazedlists_java16:glazedlists_java16 1.10.0
io:io 4.0.1
isotope_pattern_analysis:isotope_pattern_analysis 4.0.1
jama:jama 1.0.3
javax.json:javax.json-api 1.0
javax.vecmath:vecmath 1.5.2
javax.xml.bind:jaxb-api 2.2.7
jewelcli:jewelcli 0.8.9
jjobs-core:jjobs-core 0.9.6
jjobs-swing:jjobs-swing 0.9.6
jrt-fs:jrt-fs 11.0.8-internal
json:json 1.0
log4j:log4j 1.2.14
luciphor2:luciphor2 *
mass_decomposer:mass_decomposer 4.0.1
net.iharder:base64 2.3.8
net.sf.jnati:jnati-core 0.4
net.sf.jnati:jnati-deploy 0.4
net.sf.jni-inchi:jni-inchi 0.8
net.sf.opencsv:opencsv 2.3
net.sourceforge.cpdetector:cpdetector 1.0.7
net.sourceforge.jargs:jargs 1.0
org.apache.commons:commons-email 1.4
org.apache.commons:commons-lang3 3.5
org.apache.commons:commons-math3 3.2
org.apache.commons:commons-math3 3.6.1
org.apache.commons:commons-pool2 2.4.2
org.apache.httpcomponents:httpclient 4.5.1
org.apache.httpcomponents:httpcore 4.4.3
org.apache.logging.log4j:log4j-api 2.6.1
org.apache.logging.log4j:log4j-core 2.6.1
org.apache.logging.log4j:log4j-slf4j-impl 2.6.1
org.apache.maven:maven-artifact 3.5.0
org.apache.xerces.impl.Version:xercesImpl 2.8.0
org.apache.xmlcommons.Version:xml-apis 2.0.2
org.codehaus.plexus:plexus-utils 3.0.24
org.ejml.core:ejml-core 0.31
org.ejml.ddense:ejml-ddense 0.31
org.ejml.fdense:ejml-fdense 0.31
org.ejml.simple:ejml-simple 0.31
org.glassfish:javax.json 1.0.4
org.gnu.glpk:glpk-java 1.7.0
org.javatuples:javatuples 1.3-SNAPSHOT
org.jaxen:xom 1.2.5
org.jetbrains:annotations 15.0
org.jvnet.com4j:com4j 2.1
org.kohsuke.rngom:rngom 201103-SNAPSHOT
org.openscience.cdk:cdk-atomtype 2.1.1
org.openscience.cdk:cdk-charges 2.1.1
org.openscience.cdk:cdk-core 2.1.1
org.openscience.cdk:cdk-ctab 2.1.1
org.openscience.cdk:cdk-data 2.1.1
org.openscience.cdk:cdk-dict 2.1.1
org.openscience.cdk:cdk-fingerprint 2.1.1
org.openscience.cdk:cdk-forcefield 2.1.1
org.openscience.cdk:cdk-formula 2.1.1
org.openscience.cdk:cdk-fragment 2.1.1
org.openscience.cdk:cdk-hash 2.1.1
org.openscience.cdk:cdk-inchi 2.1.1
org.openscience.cdk:cdk-interfaces 2.1.1
org.openscience.cdk:cdk-io 2.1.1
org.openscience.cdk:cdk-ioformats 2.1.1
org.openscience.cdk:cdk-isomorphism 2.1.1
org.openscience.cdk:cdk-qsar 2.1.1
org.openscience.cdk:cdk-qsaratomic 2.1.1
org.openscience.cdk:cdk-qsarmolecular 2.1.1
org.openscience.cdk:cdk-reaction 2.1.1
org.openscience.cdk:cdk-render 2.1.1
org.openscience.cdk:cdk-renderawt 2.1.1
org.openscience.cdk:cdk-renderbasic 2.1.1
org.openscience.cdk:cdk-renderextra 2.1.1
org.openscience.cdk:cdk-sdg 2.1.1
org.openscience.cdk:cdk-silent 2.1.1
org.openscience.cdk:cdk-smarts 2.1.1
org.openscience.cdk:cdk-smiles 2.1.1
org.openscience.cdk:cdk-standard 2.1.1
org.openscience.cdk:cdk-valencycheck 2.1.1
org.postgresql:postgresql 42.2.1
org.slf4j:jcl-over-slf4j 1.7.19
org.slf4j:slf4j-api 1.7.19
org.slf4j:slf4j-api 1.7.22
org.slf4j:slf4j-api 1.7.25
org.slf4j:slf4j-jdk14 1.7.25
org.swinglabs.swingx:swingx-all 1.6.5-1
org.threeten:threetenbp 1.3.6
psidev.psi.tools:xxindex 0.21
sirius_api:sirius_api 4.0.1
sirius_cli:sirius_cli 4.0.1
sirius_gui:sirius_gui 4.0.1
trove4j:trove4j 3.0.3
uk.ac.ebi.beam:beam-core 1.1
uk.ac.ebi.beam:beam-func 1.1
uk.ac.ebi.jmzidml:jmzidentml 1.2.7
uk.ac.ebi.jmzml:jmzml 1.7.9
uk.ac.ebi.pride.jaxb:pride-jaxb 1.0.19
uk.ac.ebi.pride.tools:jmzreader 2.0.1
xalan:xalan 2.7.0