mziemann/meth_analysis : latest
Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data
Latest release: over 3 years ago - 9 downloads - 1,347 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnVIL 1.6.6
- AnnotationDbi 1.56.2
- AnnotationFilter 1.18.0
- AnnotationHub 3.2.2
- BH 1.81.0-1
- BSgenome 1.62.0
- BiasedUrn 2.0.9
- Biobase 2.54.0
- BiocFileCache 2.2.1
- BiocGenerics 0.40.0
- BiocIO 1.4.0
- BiocManager 1.30.16
- BiocParallel 1.28.3
- BiocVersion 3.14.0
- Biostrings 2.62.0
- DBI 1.1.3
- DMRcate 2.8.5
- DSS 2.42.0
- DT 0.27
- DelayedArray 0.20.0
- DelayedMatrixStats 1.16.0
- ExperimentHub 2.2.1
- FDb.InfiniumMethylation.hg19 2.2.0
- FlowSorted.Blood.450k 1.32.0
- FlowSorted.Blood.EPIC 1.12.1
- Formula 1.2-5
- GEOquery 2.62.2
- GGally 2.1.2
- GO.db 3.14.0
- GenSA 1.1.8
- GenomeInfoDb 1.30.1
- GenomeInfoDbData 1.2.7
- GenomicAlignments 1.30.0
- GenomicFeatures 1.46.5
- GenomicRanges 1.46.1
- Gviz 1.38.4
- HDF5Array 1.22.1
- Hmisc 5.0-1
- IRanges 2.28.0
- IlluminaHumanMethylation450kanno.ilmn12.hg19 0.6.0
- IlluminaHumanMethylation450kmanifest 0.4.0
- IlluminaHumanMethylationEPICanno.ilm10b2.hg19 0.6.0
- IlluminaHumanMethylationEPICanno.ilm10b4.hg19 0.6.0
- IlluminaHumanMethylationEPICmanifest 0.3.0
- KEGGREST 1.34.0
- KernSmooth 2.23-20
- MASS 7.3-55
- Matrix 1.4-0
- MatrixGenerics 1.6.0
- ProtGenerics 1.26.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RSQLite 2.3.0
- Rcpp 1.0.10
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- SummarizedExperiment 1.24.0
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- VariantAnnotation 1.40.0
- WGCNA 1.72-1
- XML 3.99-0.14
- XVector 0.34.0
- annotate 1.72.0
- askpass 1.1
- backports 1.4.1
- base64 2.0.1
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- base 4.1.3
- beachmat 2.10.0
- beachtest 1.0.0
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- biomaRt 2.50.3
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- class 7.3-20
- cli 3.6.0
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- cluster 2.1.2
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- commonmark 1.8.0
- compiler 4.1.3
- corrplot 0.92
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- data.table 1.14.8
- datasets 4.1.3
- dbplyr 2.3.2
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- dplyr 1.1.0
- dynamicTreeCut 1.63-1
- echarts4r 0.4.4
- edgeR 3.36.0
- ellipsis 0.3.2
- ensembldb 2.18.4
- eulerr 7.0.0
- evaluate 0.15
- fansi 1.0.2
- farver 2.1.1
- fastcluster 1.2.3
- fastmap 1.1.0
- filelock 1.0.2
- fontawesome 0.5.0
- forcats 1.0.0
- foreach 1.5.2
- foreign 0.8-82
- formatR 1.11
- fs 1.5.2
- futile.logger 1.4.3
- futile.options 1.0.1
- genefilter 1.76.0
- generics 0.1.2
- gert 1.5.0
- ggplot2 3.4.1
- gh 1.3.0
- gitcreds 0.1.1
- glue 1.6.2
- gplots 3.1.3
- grDevices 4.1.3
- graphics 4.1.3
- grid 4.1.3
- gridExtra 2.3
- gtable 0.3.3
- gtools 3.9.4
- highr 0.9
- hms 1.1.3
- htmlTable 2.4.1
- htmltools 0.5.4
- htmlwidgets 1.6.2
- httpuv 1.6.9
- httr 1.4.2
- illuminaio 0.36.0
- impute 1.68.0
- ini 0.3.1
- interactiveDisplayBase 1.32.0
- interp 1.1-3
- isoband 0.2.7
- iterators 1.0.14
- jpeg 0.1-10
- jquerylib 0.1.4
- jsonlite 1.8.0
- kableExtra 1.3.4
- knitr 1.37
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- latticeExtra 0.6-30
- lazyeval 0.2.2
- lifecycle 1.0.3
- limma 3.50.3
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- magrittr 2.0.2
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- methods 4.1.3
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