Ecosyste.ms: Docker
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mdivr/chicago : v2
Latest release: almost 2 years ago - 29 downloads - 645 dependencies
JSONDependencies
- ExperimentHub 2.6.0
- Formula 1.2-5
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicAlignments 1.34.1
- GenomicFeatures 1.50.4
- GenomicInteractions 1.32.0
- GenomicRanges 1.50.2
- Gviz 1.42.1
- Hmisc 5.0-1
- HubPub 1.6.0
- IRanges 2.32.0
- InteractionSet 1.26.1
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MALDIquant 1.22
- MASS 7.3-58.1
- MSnbase 2.24.2
- Matrix 1.5-1
- MatrixGenerics 1.10.0
- MsCoreUtils 1.10.0
- ProtGenerics 1.30.0
- R.cache 0.16.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RSQLite 2.3.0
- RUnit 0.4.32
- Rcpp 1.0.10
- RcppEigen 0.3.3.9.3
- Rhdf5lib 1.20.0
- Rhtslib 2.0.0
- Rsamtools 2.14.0
- S4Vectors 0.36.2
- SnowballC 0.7.0
- SummarizedExperiment 1.28.0
- VariantAnnotation 1.44.1
- XML 3.99-0.13
- XVector 0.38.0
- affy 1.76.0
- affyio 1.68.0
- argparser 0.7.1
- askpass 1.1
- assertthat 0.2.1
- available 1.1.0
- aws.s3 0.3.21
- aws.signature 0.6.0
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.2
- biocthis 1.8.3
- biomaRt 2.54.0
- biovizBase 1.46.0
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- bookdown 0.33
- boot 1.3-28
- brew 1.0-8
- brio 1.1.3
- bslib 0.4.2
- cachem 1.0.7
- callr 3.7.3
- checkmate 2.1.0
- class 7.3-20
- cli 3.6.0
- clipr 0.8.0
- clisymbols 1.2.0
- clue 0.3-64
- cluster 2.1.4
- codetools 0.2-18
- colorspace 2.1-0
- commonmark 1.8.1
- compiler 4.2.2
- covr 3.6.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- curl 5.0.0
- cyclocomp 1.1.0
- data.table 1.14.8
- datasets 4.2.2
- dbplyr 2.3.1
- deldir 1.0-6
- desc 1.4.2
- devtools 2.4.5
- dichromat 2.0-0.1
- diffobj 0.3.5
- digest 0.6.31
- doParallel 1.0.17
- docopt 0.7.1
- downlit 0.4.2
- dplyr 1.1.0
- ellipsis 0.3.2
- ensembldb 2.22.0
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- filelock 1.0.2
- foghorn 1.5.1
- fontawesome 0.5.0
- foreach 1.5.2
- foreign 0.8-83
- formatR 1.14
- fs 1.6.1
- futile.logger 1.4.3
- futile.options 1.0.1
- gargle 1.3.0
- gdsfmt 1.34.0
- generics 0.1.3
- gert 1.9.2
- ggplot2 3.4.1
- gh 1.4.0
- gitcreds 0.1.2
- glue 1.6.2
- gmailr 1.0.1
- grDevices 4.2.2
- graphics 4.2.2
- grid 4.2.2
- gridExtra 2.3
- gtable 0.3.1
- highr 0.10
- hms 1.1.2
- htmlTable 2.4.1
- htmltools 0.5.4
- htmlwidgets 1.6.1
- httpuv 1.6.9
- httr2 0.2.2
- httr 1.4.5
- hunspell 3.0.2
- igraph 1.4.1
- impute 1.72.3
- ini 0.3.1
- interactiveDisplayBase 1.36.0
- interp 1.1-3
- isoband 0.2.7
- iterators 1.0.14
- janeaustenr 1.0.0
- jpeg 0.1-10
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- latticeExtra 0.6-30
- lazyeval 0.2.2
- lifecycle 1.0.3
- limma 3.54.2
- lintr 3.0.2
- littler 0.3.17
- magrittr 2.0.3
- matrixStats 0.63.0
- memoise 2.0.1
- methods 4.2.2
- mgcv 1.8-41
- mime 0.12
- miniUI 0.1.1.1
- mockery 0.4.3
- munsell 0.5.0
- mzID 1.36.0
- mzR 2.32.0
- ncdf4 1.21
- nlme 3.1-160
- nnet 7.3-18
- openssl 2.0.6
- org.testing.db 0.1
- parallel 4.2.2
- parsedate 1.3.1
- pcaMethods 1.90.0
- pillar 1.8.1
- pingr 2.0.2
- pkgbuild 1.4.0
- pkgconfig 2.0.3
- pkgdown 2.0.7
- pkgload 1.3.2
- plogr 0.2.0
- plyr 1.8.8
- png 0.1-8
- praise 1.0.0
- preprocessCore 1.60.2
- prettyunits 1.1.1
- processx 3.8.0
- profvis 0.3.7
- progress 1.2.2
- promises 1.2.0.1
- ps 1.7.2
- purrr 1.0.1
- rBiopaxParser 2.38.0
- ragg 1.2.5
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- rematch2 2.1.2
- rematch 1.0.1
- remotes 2.4.2
- restfulr 0.0.15
- rex 1.2.1
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- rjson 0.2.21
- rlang 1.0.6
- rmarkdown 2.20
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- rpart 4.1.19
- rprojroot 2.0.3
- rstudioapi 0.14
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- rversions 2.1.2
- rvest 1.0.3
- sass 0.4.5
- scales 1.2.1
- selectr 0.4-2
- seqnames.db @VERSION@
- sessioninfo 1.2.2
- shiny 1.7.4
- snow 0.4-4
- sourcetools 0.1.7-1
- spatial 7.3-15
- spelling 2.2
- splines 4.2.2
- stats4 4.2.2
- stats 4.2.2
- stringdist 0.9.10
- stringi 1.7.12
- stringr 1.5.0
- styler 1.9.1
- survival 3.4-0
- sys 3.4.1
- systemfonts 1.0.4
- tcltk 4.2.2
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.7
- textshaping 0.3.6
- tibble 3.2.0
- tidyr 1.3.0
- tidyselect 1.2.0
- tidytext 0.4.1
- tinytex 0.44
- tokenizers 0.3.0
- tools 4.2.2
- translations 4.2.2
- urlchecker 1.0.1
- usethis 2.1.6
- utf8 1.2.3
- utils 4.2.2
- uuid 1.1-0
- vctrs 0.5.2
- viridis 0.6.2
- viridisLite 0.4.1
- vsn 3.66.0
- waldo 0.4.0
- whisker 0.4.1
- whoami 1.3.0
- withr 2.5.0
- xfun 0.37
- xml2 1.3.3
- xmlparsedata 1.0.5
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.7
- yesno 0.1.2
- zip 2.2.2
- zlibbioc 1.44.0
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.60.2
- AnnotationFilter 1.22.0
- AnnotationForge 1.40.1
- AnnotationHub 3.6.0
- BH 1.81.0-1
- BSgenome 1.66.3
- Biobase 2.58.0
- BiocFileCache 2.6.1
- BiocGenerics 0.44.0
- BiocIO 1.8.0
- BiocManager 1.30.20
- BiocParallel 1.32.5
- BiocStyle 2.26.0
- BiocVersion 3.16.0
- Biostrings 2.66.0
- Chicago 1.19.0
- DBI 1.1.3
- DT 0.27
- Delaporte 8.1.0
- DelayedArray 0.24.0
- ubuntu/adduser 3.118ubuntu2
- ubuntu/apt 2.0.9
- ubuntu/base-files 11ubuntu5.6
- ubuntu/base-passwd 3.5.47
- ubuntu/bash-completion 1:2.10-1ubuntu1
- ubuntu/bash 5.0-6ubuntu1.2
- ubuntu/binutils-common 2.34-6ubuntu1.4
- ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.4
- ubuntu/binutils 2.34-6ubuntu1.4
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.3
- ubuntu/bzip2-doc 1.0.8-2
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates-java 20190405ubuntu1
- ubuntu/ca-certificates 20211016ubuntu0.20.04.1
- ubuntu/coreutils 8.30-3ubuntu2
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- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
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- ubuntu/libstdc 6 10.3.0-1ubuntu1~20.04
- ubuntu/libsuitesparse-dev 1:5.7.1 dfsg-2
- ubuntu/libsuitesparseconfig5 1:5.7.1 dfsg-2
- ubuntu/libsystemd0 245.4-4ubuntu3.19
- ubuntu/libsz2 1.0.4-1
- ubuntu/libtasn1-6 4.16.0-2
- ubuntu/libthai-data 0.1.28-3
- ubuntu/libthai0 0.1.28-3
- ubuntu/libtiff-doc 4.1.0 git191117-2ubuntu0.20.04.7
- ubuntu/libtiff-opengl 4.1.0 git191117-2ubuntu0.20.04.7
- ubuntu/libtiff-tools 4.1.0 git191117-2ubuntu0.20.04.7
- ubuntu/libtiff5 4.1.0 git191117-2ubuntu0.20.04.7
- ubuntu/libtiffxx5 4.1.0 git191117-2ubuntu0.20.04.7
- ubuntu/libtinfo6 6.2-0ubuntu2
- ubuntu/libtsan0 10.3.0-1ubuntu1~20.04
- ubuntu/libturbojpeg 2.0.3-0ubuntu1.20.04.3
- ubuntu/libubsan1 10.3.0-1ubuntu1~20.04
- ubuntu/libudev1 245.4-4ubuntu3.19
- ubuntu/libumfpack5 1:5.7.1 dfsg-2
- ubuntu/libunistring2 0.9.10-2
- ubuntu/libuuid1 2.34-0.1ubuntu9.3
- ubuntu/libvulkan1 1.2.131.2-1
- ubuntu/libwebp6 0.6.1-2ubuntu0.20.04.1
- ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1.3
- ubuntu/libx11-6 2:1.6.9-2ubuntu1.2
- ubuntu/libx11-data 2:1.6.9-2ubuntu1.2
- ubuntu/libx11-xcb1 2:1.6.9-2ubuntu1.2
- ubuntu/libxau6 1:1.0.9-0ubuntu1
- ubuntu/libxaw7 2:1.0.13-1
- ubuntu/libxcb-dri2-0 1.14-2
- ubuntu/libxcb-dri3-0 1.14-2
- ubuntu/libxcb-glx0 1.14-2
- ubuntu/libxcb-present0 1.14-2
- ubuntu/libxcb-render0 1.14-2
- ubuntu/libxcb-shm0 1.14-2
- ubuntu/libxcb-sync1 1.14-2
- ubuntu/libxcb-xfixes0 1.14-2
- ubuntu/libxcb1 1.14-2
- ubuntu/libxdmcp6 1:1.1.3-0ubuntu1
- ubuntu/libxext6 2:1.3.4-0ubuntu1
- ubuntu/libxfixes3 1:5.0.3-2
- ubuntu/libxi6 2:1.7.10-0ubuntu1
- ubuntu/libxml2-dev 2.9.10 dfsg-5ubuntu0.20.04.5
- ubuntu/libxml2 2.9.10 dfsg-5ubuntu0.20.04.5
- ubuntu/libxrender1 1:0.9.10-1
- ubuntu/libxshmfence1 1.3-1
- ubuntu/libxt6 1:1.1.5-1
- ubuntu/libxxf86vm1 1:1.1.4-1build1
- ubuntu/libzstd1 1.4.4 dfsg-3ubuntu0.1
- ubuntu/linux-libc-dev 5.4.0-137.154
- ubuntu/locales 2.31-0ubuntu9.9
- ubuntu/login 1:4.8.1-1ubuntu5.20.04.4
- ubuntu/logsave 1.45.5-2ubuntu1.1
- ubuntu/lsb-base 11.1.0ubuntu2
- ubuntu/make 4.2.1-1.2
- ubuntu/mawk 1.3.4.20200120-2
- ubuntu/mime-support 3.64ubuntu1
- ubuntu/mount 2.34-0.1ubuntu9.3
- ubuntu/mysql-common 5.8 1.0.5ubuntu2
- ubuntu/ncurses-base 6.2-0ubuntu2
- ubuntu/ncurses-bin 6.2-0ubuntu2
- ubuntu/netbase 6.1
- ubuntu/ocaml-base-nox 4.08.1-8
- ubuntu/ocaml-nox 4.08.1-8
- ubuntu/openjdk-11-jre-headless 11.0.17 8-1ubuntu2~20.04
- ubuntu/openssl 1.1.1f-1ubuntu2.16
- ubuntu/passwd 1:4.8.1-1ubuntu5.20.04.4
- ubuntu/perl-base 5.30.0-9ubuntu0.3
- ubuntu/perl-modules-5.30 5.30.0-9ubuntu0.3
- ubuntu/perl 5.30.0-9ubuntu0.3
- ubuntu/pkg-config 0.29.1-0ubuntu4
- ubuntu/preview-latex-style 11.91-2ubuntu2
- ubuntu/procps 2:3.3.16-1ubuntu2.3
- ubuntu/python3.8-minimal 3.8.10-0ubuntu1~20.04.6
- ubuntu/python3 3.8.2-0ubuntu2
- ubuntu/readline-common 8.0-4
- ubuntu/sed 4.7-1
- ubuntu/sensible-utils 0.0.12 nmu1
- ubuntu/sudo 1.8.31-1ubuntu1.4
- ubuntu/sysvinit-utils 2.96-2.1ubuntu1
- ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.2
- ubuntu/tcl8.6 8.6.10 dfsg-1
- ubuntu/tex-common 6.13
- ubuntu/tk8.6 8.6.10-1
- ubuntu/tzdata 2022g-0ubuntu0.20.04.1
- ubuntu/ubuntu-keyring 2020.02.11.4
- ubuntu/ucf 3.0038 nmu1
- ubuntu/unzip 6.0-25ubuntu1.1
- ubuntu/util-linux 2.34-0.1ubuntu9.3
- ubuntu/x11-common 1:7.7 19ubuntu14
- ubuntu/xfonts-utils 1:7.7 6
- ubuntu/xz-utils 5.2.4-1ubuntu1.1
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5
- bash 5.0.17
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.2.2
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.2.2