luisas/rde : latest
Latest release: over 5 years ago - 68 downloads - 549 dependencies
JSONDependencies
- MASS 7.3-51.5
- MAST 1.12.0
- Matrix 1.2-18
- R6 2.4.1
- RANN 2.6.1
- RColorBrewer 1.1-2
- RCurl 1.98-1.2
- ROCR 1.0-11
- RSQLite 2.2.1
- RSpectra 0.16-0
- Rcpp 1.0.5
- RcppAnnoy 0.0.16
- RcppArmadillo 0.10.1.0.0
- RcppEigen 0.3.3.7.0
- RcppHNSW 0.3.0
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- Rhdf5lib 1.8.0
- Rhtslib 1.18.1
- Rsamtools 2.2.3
- Rtsne 0.15
- S4Vectors 0.24.4
- Seurat 3.2.2
- SingleCellExperiment 1.8.0
- SummarizedExperiment 1.16.1
- XML 3.99-0.3
- XVector 0.26.0
- abind 1.4-5
- annotate 1.64.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.1.10
- base64enc 0.1-3
- base 3.6.3
- beachmat 2.2.1
- beachtest 1.0.0
- beeswarm 0.2.3
- bit64 4.0.5
- bit 4.0.4
- bitops 1.0-6
- blob 1.2.1
- boot 1.3-24
- brew 1.0-6
- brio 1.1.0
- caTools 1.18.0
- callr 3.5.1
- checkmate 2.0.0
- class 7.3-15
- cli 2.0.2
- clipr 0.7.0
- cluster 2.1.0
- codetools 0.2-16
- colorspace 1.4-1
- commonmark 1.7
- compiler 3.6.3
- covr 3.5.1
- cowplot 1.1.0
- cpp11 0.2.1
- crayon 1.3.4
- crosstalk 1.1.0.1
- curl 4.3
- data.table 1.13.2
- datasets 3.6.3
- deldir 0.1-29
- desc 1.2.0
- devtools 2.3.2
- diffobj 0.3.2
- digest 0.6.25
- doParallel 1.0.16
- doRNG 1.8.2
- dplyr 1.0.2
- dqrng 0.2.1
- edgeR 3.28.1
- ellipsis 0.3.1
- evaluate 0.14
- fansi 0.4.1
- farver 2.0.3
- fastmap 1.0.1
- fitdistrplus 1.1-1
- foreach 1.5.1
- foreign 0.8-75
- formatR 1.7
- fs 1.5.0
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.6.0
- future 1.18.0
- genefilter 1.68.0
- geneplotter 1.64.0
- generics 0.0.2
- ggbeeswarm 0.6.0
- ggplot2 3.3.2
- ggrepel 0.8.2
- ggridges 0.5.2
- gh 1.1.0
- git2r 0.27.1
- globals 0.13.0
- glue 1.4.2
- goftest 1.2-2
- gplots 3.1.0
- grDevices 3.6.3
- graphics 3.6.3
- grid 3.6.3
- gridExtra 2.3
- gtable 0.3.0
- gtools 3.8.2
- hexbin 1.28.1
- highr 0.8
- hms 0.5.3
- htmlTable 2.1.0
- htmltools 0.5.0
- htmlwidgets 1.5.1
- httpuv 1.5.4
- httr 1.4.2
- ica 1.0-2
- igraph 1.2.5
- ini 0.3.1
- irlba 2.3.3
- isoband 0.2.2
- iterators 1.0.13
- jpeg 0.1-8.1
- jsonlite 1.7.1
- knitr 1.30
- labeling 0.3
- lambda.r 1.2.4
- later 1.1.0.1
- lattice 0.20-40
- latticeExtra 0.6-29
- lazyeval 0.2.2
- leiden 0.3.3
- lifecycle 0.2.0
- limma 3.42.2
- listenv 0.8.0
- littler 0.3.9
- lmtest 0.9-38
- locfit 1.5-9.4
- magrittr 1.5
- markdown 1.1
- matrixStats 0.56.0
- memoise 1.1.0
- methods 3.6.3
- mgcv 1.8-31
- mime 0.9
- miniUI 0.1.1.1
- morebeach 1.0.0
- munsell 0.5.0
- nlme 3.1-144
- nnet 7.3-13
- openssl 1.4.3
- org.testing.db 0.1
- parallel 3.6.3
- patchwork 1.0.1
- pbapply 1.4-3
- pillar 1.4.6
- pkgbuild 1.1.0
- pkgconfig 2.0.3
- pkgload 1.1.0
- plogr 0.2.0
- plotly 4.9.2.1
- plyr 1.8.6
- png 0.1-7
- polyclip 1.10-0
- praise 1.0.0
- prettyunits 1.1.1
- processx 3.4.4
- progress 1.2.2
- promises 1.1.1
- ps 1.3.4
- purrr 0.3.4
- rappdirs 0.3.1
- rcmdcheck 1.3.3
- readr 1.3.1
- rematch2 2.1.2
- remotes 2.2.0
- reshape2 1.4.4
- reticulate 1.16
- rex 1.2.0
- rhdf5 2.30.1
- rlang 0.4.7
- rmarkdown 2.5
- rngtools 1.5
- roxygen2 7.1.1
- rpart 4.1-15
- rprojroot 1.3-2
- rstudioapi 0.11
- rsvd 1.0.3
- rtracklayer 1.46.0
- rversions 2.0.2
- scales 1.1.1
- scater 1.14.6
- scran 1.14.6
- sctransform 0.3
- sessioninfo 1.1.1
- shiny 1.5.0
- sitmo 2.0.1
- snow 0.4-3
- softImpute 1.4
- sourcetools 0.1.7
- spatial 7.3-11
- spatstat.data 1.4-3
- spatstat.utils 1.17-0
- spatstat 1.64-1
- splines 3.6.3
- statmod 1.4.35
- stats4 3.6.3
- stats 3.6.3
- stringi 1.5.3
- stringr 1.4.0
- survival 3.1-8
- sys 3.4
- tcltk 3.6.3
- tensor 1.5
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.0.0
- tibble 3.0.3
- tidyr 1.1.2
- tidyselect 1.1.0
- tinytex 0.27
- tools 3.6.3
- translations 3.6.3
- usethis 1.6.3
- utf8 1.1.4
- utils 3.6.3
- uwot 0.1.8
- vctrs 0.3.4
- vipor 0.4.5
- viridis 0.5.1
- viridisLite 0.3.0
- waldo 0.2.3
- whisker 0.4
- withr 2.2.0
- xfun 0.19
- xml2 1.3.2
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.2.1
- zinbwave 1.8.0
- zlibbioc 1.32.0
- zoo 1.8-8
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.48.0
- BH 1.72.0-3
- Biobase 2.46.0
- BiocGenerics 0.32.0
- BiocManager 1.30.10
- BiocNeighbors 1.4.2
- BiocParallel 1.20.1
- BiocSingular 1.2.2
- BiocVersion 3.10.1
- Biostrings 2.54.0
- DBI 1.1.0
- DESeq2 1.26.0
- DT 0.15
- DelayedArray 0.12.3
- DelayedMatrixStats 1.8.0
- FNN 1.1.3
- Formula 1.2-4
- GENIE3 1.8.0
- GenomeInfoDb 1.22.1
- GenomeInfoDbData 1.2.2
- GenomicAlignments 1.22.1
- GenomicRanges 1.38.0
- HDF5Array 1.14.4
- Hmisc 4.4-1
- IRanges 2.20.2
- KernSmooth 2.23-16
- debian/adduser 3.118
- debian/apt 1.8.4
- debian/base-files 11
- debian/base-passwd 3.5.47
- debian/bash 5.0-5
- debian/binutils-common 2.34-3
- debian/binutils-x86-64-linux-gnu 2.34-3
- debian/binutils 2.34-3
- debian/bsdutils 1:2.34-0.1
- debian/build-essential 12.8
- debian/bzip2 1.0.8-2
- debian/ca-certificates 20190110
- debian/coreutils 8.30-3 b1
- debian/cpp-9 9.2.1-30
- debian/cpp 4:9.2.1-3.1
- debian/dash 0.5.10.2-6
- debian/debconf 1.5.73
- debian/debian-archive-keyring 2019.1
- debian/debianutils 4.9.1
- debian/diffutils 1:3.7-3
- debian/dpkg-dev 1.19.7
- debian/dpkg 1.19.7
- debian/e2fsprogs 1.45.5-2
- debian/ed 1.16-1
- debian/fdisk 2.34-0.1
- debian/findutils 4.7.0-1
- debian/fontconfig-config 2.13.1-2
- debian/fontconfig 2.13.1-2 b1
- debian/fonts-dejavu-core 2.37-1
- debian/fonts-texgyre 20180621-3
- debian/g -9 9.2.1-30
- debian/g 4:9.2.1-3.1
- debian/gcc-10-base 10-20200222-1
- debian/gcc-9-base 9.2.1-30
- debian/gcc-9 9.2.1-30
- debian/gcc 4:9.2.1-3.1
- debian/gfortran-9 9.2.1-30
- debian/gfortran 4:9.2.1-3.1
- debian/gpgv 2.2.19-1
- debian/grep 3.4-1
- debian/gzip 1.9-3 b1
- debian/hostname 3.23
- debian/icu-devtools 63.2-2
- debian/init-system-helpers 1.57
- debian/iproute2 5.5.0-1
- debian/iputils-ping 3:20190709-3
- debian/less 551-1
- debian/libacl1 2.2.53-5
- debian/libapt-pkg5.0 1.8.4
- debian/libasan5 9.2.1-30
- debian/libatomic1 10-20200222-1
- debian/libattr1 1:2.4.48-5
- debian/libaudit-common 1:2.8.5-2
- debian/libaudit1 1:2.8.5-2 b1
- debian/libbinutils 2.34-3
- debian/libblas-dev 3.9.0-1
- debian/libblas3 3.9.0-1
- debian/libblkid1 2.34-0.1
- debian/libbrotli1 1.0.7-6
- debian/libbsd0 0.10.0-1
- debian/libbz2-1.0 1.0.8-2
- debian/libbz2-dev 1.0.8-2
- debian/libc-bin 2.29-10
- debian/libc-dev-bin 2.29-10
- debian/libc-l10n 2.29-10
- debian/libc6-dev 2.29-10
- debian/libc6 2.29-10
- debian/libcairo2 1.16.0-4
- debian/libcap-ng0 0.7.9-2.1 b1
- debian/libcap2-bin 1:2.32-1
- debian/libcap2 1:2.32-1
- debian/libcc1-0 10-20200222-1
- debian/libcom-err2 1.45.5-2
- debian/libcrypt-dev 1:4.4.10-10
- debian/libcrypt1 1:4.4.10-10
- debian/libctf-nobfd0 2.34-3
- debian/libctf0 2.34-3
- debian/libcurl4-openssl-dev 7.72.0-1
- debian/libcurl4 7.72.0-1
- debian/libdatrie1 0.2.12-3
- debian/libdb5.3 5.3.28 dfsg1-0.6
- debian/libdebconfclient0 0.251
- debian/libdpkg-perl 1.19.7
- debian/libelf1 0.176-1.1
- debian/libexpat1 2.2.9-1
- debian/libext2fs2 1.45.5-2
- debian/libfdisk1 2.34-0.1
- debian/libffi7 3.3-3
- debian/libfontconfig1 2.13.1-2 b1
- debian/libfreetype6 2.10.1-2
- debian/libfribidi0 1.0.8-2
- debian/libgcc-9-dev 9.2.1-30
- debian/libgcc-s1 10-20200222-1
- debian/libgcc1 1:10-20200222-1
- debian/libgcrypt20-dev 1.8.6-2
- debian/libgcrypt20 1.8.6-2
- debian/libgdbm-compat4 1.18.1-5
- debian/libgdbm6 1.18.1-5
- debian/libgfortran-9-dev 9.2.1-30
- debian/libgfortran5 10-20200222-1
- debian/libglib2.0-0 2.62.5-1
- debian/libgmp10 2:6.1.2 dfsg-4
- debian/libgnutls30 3.6.12-2
- debian/libgomp1 10-20200222-1
- debian/libgpg-error-dev 1.38-2
- debian/libgpg-error0 1.38-2
- debian/libgraphite2-3 1.3.13-11
- debian/libgssapi-krb5-2 1.17-6
- debian/libharfbuzz0b 2.6.4-1
- debian/libhogweed5 3.5.1 really3.5.1-2
- debian/libice6 2:1.0.9-2
- debian/libicu-dev 63.2-2
- debian/libicu63 63.2-2
- debian/libicu67 67.1-4
- debian/libidn2-0 2.2.0-2
- debian/libisl22 0.22.1-1
- debian/libitm1 10-20200222-1
- debian/libjbig0 2.1-3.1 b2
- debian/libjpeg-dev 1:1.5.2-2
- debian/libjpeg62-turbo-dev 1:1.5.2-2 b1
- debian/libjpeg62-turbo 1:1.5.2-2 b1
- debian/libk5crypto3 1.17-6
- debian/libkeyutils1 1.6.1-2
- debian/libkrb5-3 1.17-6
- debian/libkrb5support0 1.17-6
- debian/liblapack-dev 3.9.0-1
- debian/liblapack3 3.9.0-1
- debian/libldap-2.4-2 2.4.49 dfsg-1
- debian/libldap-common 2.4.49 dfsg-1
- debian/liblsan0 10-20200222-1
- debian/liblz4-1 1.9.2-2
- debian/liblzma-dev 5.2.4-1 b1
- debian/liblzma5 5.2.4-1 b1
- debian/libmnl0 1.0.4-2 b1
- debian/libmount1 2.34-0.1
- debian/libmpc3 1.1.0-1
- debian/libmpfr6 4.0.2-1
- debian/libncurses-dev 6.1 20191019-1
- debian/libncurses5-dev 6.1 20191019-1
- debian/libncurses6 6.1 20191019-1
- debian/libncursesw6 6.1 20191019-1
- debian/libnettle7 3.5.1 really3.5.1-2
- debian/libnghttp2-14 1.40.0-1
- debian/libp11-kit0 0.23.20-1
- debian/libpam-modules-bin 1.3.1-5
- debian/libpam-modules 1.3.1-5
- debian/libpam-runtime 1.3.1-5
- debian/libpam0g 1.3.1-5
- debian/libpango-1.0-0 1.42.4-8
- debian/libpangocairo-1.0-0 1.42.4-8
- debian/libpangoft2-1.0-0 1.42.4-8
- debian/libpaper-utils 1.1.28 b1
- debian/libpaper1 1.1.28 b1
- debian/libpcre16-3 2:8.39-12 b1
- debian/libpcre2-16-0 10.34-7
- debian/libpcre2-32-0 10.34-7
- debian/libpcre2-8-0 10.34-7
- debian/libpcre2-dev 10.34-7
- debian/libpcre2-posix2 10.34-7
- debian/libpcre3-dev 2:8.39-12 b1
- debian/libpcre32-3 2:8.39-12 b1
- debian/libpcre3 2:8.39-12 b1
- debian/libpcrecpp0v5 2:8.39-12 b1
- debian/libperl5.30 5.30.0-9
- debian/libpixman-1-0 0.36.0-1
- debian/libpng-dev 1.6.37-2
- debian/libpng16-16 1.6.37-2
- debian/libpsl5 0.20.2-2
- debian/libquadmath0 10-20200222-1
- debian/libreadline-dev 8.0-4
- debian/libreadline8 8.0-4
- debian/librtmp1 2.4 20151223.gitfa8646d.1-2 b1
- debian/libsasl2-2 2.1.27 dfsg-2
- debian/libsasl2-modules-db 2.1.27 dfsg-2
- debian/libseccomp2 2.4.2-2
- debian/libselinux1 3.0-1 b1
- debian/libsemanage-common 3.0-1
- debian/libsemanage1 3.0-1 b1
- debian/libsepol1 3.0-1
- debian/libsm6 2:1.2.3-1
- debian/libsmartcols1 2.34-0.1
- debian/libss2 1.45.5-2
- debian/libssh2-1-dev 1.8.0-2.1
- debian/libssh2-1 1.8.0-2.1
- debian/libssl-dev 1.1.1g-1
- debian/libssl1.1 1.1.1g-1
- debian/libstdc -9-dev 9.2.1-30
- debian/libstdc 6 10-20200222-1
- debian/libsystemd0 244.3-1
- debian/libtasn1-6 4.15.0-2
- debian/libtcl8.6 8.6.10 dfsg-1
- debian/libthai-data 0.1.28-3
- debian/libthai0 0.1.28-3
- debian/libtiff5 4.1.0 git191117-2
- debian/libtinfo6 6.1 20191019-1
- debian/libtk8.6 8.6.10-1
- debian/libtsan0 10-20200222-1
- debian/libubsan1 10-20200222-1
- debian/libudev1 244.3-1
- debian/libunistring2 0.9.10-2
- debian/libuuid1 2.34-0.1
- debian/libwebp6 0.6.1-2 b1
- debian/libx11-6 2:1.6.9-1
- debian/libx11-data 2:1.6.9-1
- debian/libxau6 1:1.0.8-1 b2
- debian/libxcb-render0 1.13.1-5
- debian/libxcb-shm0 1.13.1-5
- debian/libxcb1 1.13.1-5
- debian/libxdmcp6 1:1.1.2-3
- debian/libxext6 2:1.3.3-1 b2
- debian/libxft2 2.3.2-2
- debian/libxml2-dev 2.9.10 dfsg-6
- debian/libxml2 2.9.10 dfsg-6
- debian/libxmuu1 2:1.1.2-2 b3
- debian/libxrender1 1:0.9.10-1
- debian/libxss1 1:1.2.3-1
- debian/libxt6 1:1.1.5-1 b3
- debian/libxtables12 1.8.4-3
- debian/libzstd1 1.4.4 dfsg-3
- debian/linux-libc-dev 5.4.19-1
- debian/littler 0.3.9-1
- debian/locales 2.29-10
- debian/login 1:4.8.1-1
- debian/logsave 1.45.5-2
- debian/lsb-base 11.1.0
- debian/make 4.2.1-1.2
- debian/mawk 1.3.4.20200120-2
- debian/mount 2.34-0.1
- debian/ncurses-base 6.1 20191019-1
- debian/ncurses-bin 6.1 20191019-1
- debian/openssl 1.1.1d-2
- debian/passwd 1:4.8.1-1
- debian/patch 2.7.6-6
- debian/perl-base 5.30.0-9
- debian/perl-modules-5.30 5.30.0-9
- debian/perl 5.30.0-9
- debian/pkg-config 0.29-6
- debian/r-base-core 3.6.2.20200221-1
- debian/r-base-dev 3.6.2-2
- debian/r-base 3.6.2-2
- debian/r-cran-boot 1.3-24-2
- debian/r-cran-class 7.3-15-1 b1
- debian/r-cran-cluster 2.1.0-2
- debian/r-cran-codetools 0.2-16-1
- debian/r-cran-foreign 0.8.75-1
- debian/r-cran-kernsmooth 2.23-16-1 1
- debian/r-cran-lattice 0.20-40-1
- debian/r-cran-littler 0.3.9-1
- debian/r-cran-mass 7.3-51.5-2
- debian/r-cran-matrix 1.2-18-1
- debian/r-cran-mgcv 1.8-31-1
- debian/r-cran-nlme 3.1.144-1
- debian/r-cran-nnet 7.3-13-1
- debian/r-cran-rpart 4.1-15-2
- debian/r-cran-spatial 7.3-11-2 b2
- debian/r-cran-survival 3.1-8-1
- debian/r-recommended 3.6.2-2
- debian/readline-common 8.0-4
- debian/sed 4.7-1
- debian/sensible-utils 0.0.12 nmu1
- debian/sysvinit-utils 2.96-2.1
- debian/tar 1.30 dfsg-6 b1
- debian/tzdata 2019c-3
- debian/ucf 3.0038 nmu1
- debian/unzip 6.0-25
- debian/util-linux 2.34-0.1
- debian/vim-common 2:8.1.2269-1
- debian/vim-tiny 2:8.1.2269-1 b1
- debian/wget 1.20.3-1 b2
- debian/x11-common 1:7.7 20
- debian/xauth 1:1.0.10-1
- debian/xdg-utils 1.1.3-1
- debian/xxd 2:8.1.2269-1 b1
- debian/xz-utils 5.2.4-1 b1
- debian/zip 3.0-11 b1
- debian/zlib1g-dev 1:1.2.11.dfsg-2
- debian/zlib1g 1:1.2.11.dfsg-2