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kubran/odcf_aceseqcalling : v6
Debian GNU/Linux 10 (buster)
Latest release: over 1 year ago - 15 downloads - 1,103 dependencies
JSONDependencies
- BH 1.81.0-1
- BiocGenerics 0.28.0
- BiocManager 1.30.20
- BiocVersion 3.8.0
- Biostrings 2.50.2
- Canopy 1.3.0
- DBI 1.1.3
- DBItest 1.5-2
- DEoptimR 1.0-11
- DNAcopy 1.56.0
- FNN 1.1.3
- FNN 1.1.3.1
- GenomeInfoDb 1.18.2
- GenomeInfoDbData 1.2.0
- GenomicRanges 1.34.0
- IRanges 2.16.0
- KernSmooth 2.23-20
- KernSmooth 2.23-21
- MASS 7.3-51.1
- MASS 7.3-57
- Matrix 1.4-1
- Matrix 1.5-4
- PSCBS 0.66.0
- R.cache 0.16.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- RSQLite 2.1.1
- RUnit 0.4.32
- Rcpp 1.0.10
- Rcpp 1.0.8.3
- RcppParallel 5.1.7
- S4Vectors 0.20.1
- XVector 0.22.0
- ape 5.7-1
- aroma.light 3.12.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base 3.5.2
- base 4.0.5
- base 4.2.0
- bindr 0.1.1
- bindrcpp 0.2.2
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.1.1
- blob 1.2.4
- boot 1.3-28.1
- brew 1.0-8
- brio 1.1.3
- broom 0.5.1
- broom 1.0.4
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.8
- callr 3.1.1
- callr 3.7.3
- cellranger 1.1.0
- checkmate 2.2.0
- class 7.3-20
- class 7.3-22
- cli 1.0.1
- cli 3.6.1
- clipr 0.8.0
- cluster 2.1.3
- cluster 2.1.4
- codetools 0.2-19
- colorspace 1.4-0
- colorspace 2.1-0
- commonmark 1.9.0
- compiler 3.5.2
- compiler 4.0.5
- compiler 4.2.0
- cpp11 0.4.3
- crayon 1.3.4
- crayon 1.5.2
- curl 3.3
- data.table 1.12.0
- data.table 1.14.8
- datasets 3.5.2
- datasets 4.0.5
- datasets 4.2.0
- dbplyr 1.3.0
- dbplyr 2.3.2
- desc 1.2.0
- desc 1.4.2
- diffobj 0.3.5
- digest 0.6.31
- diptest 0.76-0
- doParallel 1.0.17
- dotCall64 1.0-2
- downlit 0.4.2
- dplyr 0.7.8
- dplyr 1.1.2
- dtplyr 1.3.1
- e1071 1.7-13
- ellipsis 0.3.2
- evaluate 0.13
- evaluate 0.21
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- fields 14.1
- filehash 2.4-5
- flexclust 1.4-1
- flexmix 2.3-17
- flexmix 2.3-18
- flux 0.3-0.1
- forcats 0.3.0
- forcats 1.0.0
- foreach 1.5.2
- foreign 0.8-71
- fpc 2.2-9
- fs 1.2.6
- fs 1.6.2
- future 1.32.0
- gargle 1.4.0
- generics 0.1.3
- getopt 1.20.3
- ggplot2 3.1.0
- ggplot2 3.4.2
- gh 1.4.0
- gitcreds 0.1.2
- globals 0.16.2
- glue 1.6.2
- googledrive 2.1.0
- googlesheets4 1.1.0
- grDevices 3.5.2
- grDevices 4.0.5
- grDevices 4.2.0
- graphics 3.5.2
- graphics 4.0.5
- graphics 4.2.0
- grid 3.5.2
- grid 4.0.5
- grid 4.2.0
- gridExtra 2.3
- gtable 0.2.0
- gtable 0.3.3
- haven 2.1.0
- haven 2.5.2
- highr 0.10
- hms 0.4.2
- hms 1.1.3
- htmltools 0.3.6
- htmltools 0.5.5
- httpuv 1.4.5.1
- httr2 0.2.3
- httr 1.4.0
- httr 1.4.6
- ids 1.0.1
- ini 0.3.1
- inline 0.3.19
- isoband 0.2.7
- iterators 1.0.14
- jquerylib 0.1.4
- jsonlite 1.6
- jsonlite 1.8.4
- kernlab 0.9-30
- knitr 1.21
- knitr 1.42
- ks 1.13.5
- labeling 0.4.2
- later 0.7.5
- lattice 0.20-38
- lattice 0.20-45
- lazyeval 0.2.2
- lifecycle 1.0.3
- listenv 0.9.0
- littler 0.3.18
- loo 2.6.0
- lubridate 1.7.4
- lubridate 1.9.2
- magrittr 2.0.3
- maps 3.4.1
- markdown 1.6
- matrixStats 0.63.0
- mclust 5.4.10
- mclust 5.4.9
- memoise 2.0.1
- methods 3.5.2
- methods 4.0.5
- methods 4.2.0
- mgcv 1.8-27
- mgcv 1.8-40
- mime 0.12
- miniUI 0.1.1.1
- misc3d 0.9-1
- mockery 0.4.3
- mockr 0.2.1
- modelr 0.1.11
- modelr 0.1.3
- modeltools 0.2-23
- multicool 0.1-12
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- nlme 3.1-157
- nlme 3.1-162
- nnet 7.3-17
- nnet 7.3-19
- openssl 1.2.2
- optparse 1.6.1
- palmerpenguins 0.1.1
- parallel 3.5.2
- parallel 4.0.5
- parallel 4.2.0
- parallelly 1.35.0
- pheatmap 1.0.12
- pillar 1.3.1
- pillar 1.9.0
- pkgKitten 0.2.3
- pkgbuild 1.0.2
- pkgbuild 1.4.0
- pkgconfig 2.0.3
- pkgload 1.3.2
- plogr 0.2.0
- plot3D 1.4
- plyr 1.8.7
- plyr 1.8.8
- png 0.1-8
- prabclus 2.3-2
- pracma 2.3.8
- pracma 2.4.2
- praise 1.0.0
- prettyunits 1.1.1
- processx 3.2.1
- processx 3.8.1
- profvis 0.3.8
- progress 1.2.2
- promises 1.2.0.1
- proxy 0.4-27
- ps 1.3.0
- ps 1.7.5
- purrr 0.3.0
- purrr 1.0.1
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- readr 1.3.1
- readr 2.1.4
- readxl 1.3.0
- readxl 1.4.2
- rematch2 2.1.2
- rematch 1.0.1
- remotes 2.4.2
- reprex 2.0.2
- reshape2 1.4.4
- reshape 0.8.9
- rlang 0.3.1
- rlang 1.1.1
- robustbase 0.95-0
- roxygen2 7.2.3
- rpart 4.1.19
- rprojroot 2.0.3
- rstudioapi 0.14
- rversions 2.1.2
- rvest 0.3.2
- sass 0.4.6
- scales 1.0.0
- scales 1.2.1
- scatterplot3d 0.3-44
- selectr 0.4-2
- sessioninfo 1.2.2
- sourcetools 0.1.7-1
- sp 1.6-0
- spam 2.9-1
- spatial 7.3-16
- splines 3.5.2
- splines 4.0.5
- splines 4.2.0
- stats4 3.5.2
- stats4 4.0.5
- stats4 4.2.0
- stats 3.5.2
- stats 4.0.5
- stats 4.2.0
- stringi 1.7.12
- stringi 1.7.6
- stringr 1.4.0
- stringr 1.5.0
- survival 3.5-5
- sys 3.4.1
- tcltk 3.5.2
- tcltk 4.0.5
- tcltk 4.2.0
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testit 0.13
- testthat 2.0.1
- testthat 3.1.8
- tibble 2.0.1
- tibble 3.2.1
- tidyr 0.8.2
- tidyr 1.3.0
- tidyselect 0.2.5
- tidyselect 1.2.0
- tikzDevice 0.12.4
- timechange 0.2.0
- tinytex 0.10
- tools 3.5.2
- tools 4.0.5
- tools 4.2.0
- translations 3.5.2
- translations 4.0.5
- translations 4.2.0
- tzdb 0.3.0
- urlchecker 1.0.1
- utf8 1.2.3
- utils 3.5.2
- utils 4.0.5
- utils 4.2.0
- uuid 1.1-0
- vctrs 0.6.2
- viridis 0.6.3
- viridisLite 0.3.0
- viridisLite 0.4.2
- vroom 1.6.3
- waldo 0.5.1
- webutils 1.1
- whisker 0.4.1
- withr 2.5.0
- xfun 0.39
- xfun 0.4
- xml2 1.2.0
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.7
- zip 2.3.0
- zlibbioc 1.28.0
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