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koki/tensor-projects-machima : 20220827
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.58.0
- AnnotationFilter 1.20.0
- AnnotationHub 3.4.0
- BH 1.78.0-0
- Biobase 2.56.0
- BiocFileCache 2.4.0
- BiocGenerics 0.42.0
- BiocIO 1.6.0
- BiocManager 1.30.18
- BiocNeighbors 1.14.0
- BiocParallel 1.30.3
- BiocSingular 1.12.0
- BiocStyle 2.24.0
- BiocVersion 3.15.2
- Biostrings 2.64.1
- ComplexHeatmap 2.12.1
- DBI 1.1.3
- DT 0.24
- DelayedArray 0.22.0
- DelayedMatrixStats 1.18.0
- DescTools 0.99.45
- Exact 3.1
- ExperimentHub 2.4.0
- GSEABase 1.58.0
- GenomeInfoDb 1.32.3
- ccTensor 1.0.2
- FNN 1.1.3.1
- GO.db 3.15.0
- celldex 1.6.0
- GenomeInfoDbData 1.2.8
- GenomicAlignments 1.32.1
- GenomicFeatures 1.48.3
- GenomicRanges 1.48.0
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- HCAData 1.12.0
- HDF5Array 1.24.2
- Homo.sapiens 1.3.1
- IRanges 2.30.1
- KEGGREST 1.36.3
- KernSmooth 2.23-20
- MASS 7.3-58.1
- Machima 0.99.0
- Matrix 1.4-1
- MatrixGenerics 1.8.1
- MatrixModels 0.5-0
- Mus.musculus 1.3.1
- OrganismDbi 1.38.1
- ProtGenerics 1.28.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.0
- R6 2.5.1
- RANN 2.6.1
- RBGL 1.72.0
- RColorBrewer 1.1-3
- RCurl 1.98-1.8
- ROCR 1.0-11
- RSQLite 2.2.16
- RSpectra 0.16-1
- Rcpp 1.0.9
- RcppAnnoy 0.0.19
- RcppArmadillo 0.11.2.3.1
- RcppEigen 0.3.3.9.2
- RcppHNSW 0.4.1
- RcppML 0.3.7
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.1.7
- Rhdf5lib 1.18.2
- Rhtslib 1.28.0
- Rsamtools 2.12.0
- Rtsne 0.16
- S4Vectors 0.34.0
- ScaledMatrix 1.4.0
- Seurat 4.1.1
- SeuratObject 4.1.0
- SingleCellExperiment 1.18.0
- SparseM 1.81
- SummarizedExperiment 1.26.1
- TENxPBMCData 1.14.0
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- TxDb.Mmusculus.UCSC.mm10.knownGene 3.10.0
- V8 4.2.1
- XML 3.99-0.10
- XVector 0.36.0
- abind 1.4-5
- annotate 1.74.0
- askpass 1.1
- assertthat 0.2.1
- babelgene 22.3
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.0
- beachmat 2.12.0
- beachtest 1.0.0
- beeswarm 0.4.0
- bindSC 1.0.0
- biomaRt 2.52.0
- bit64 4.0.5
- bit 4.0.4
- bitops 1.0-7
- blob 1.2.3
- bookdown 0.28
- boot 1.3-28
- brew 1.0-7
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- broom 1.0.0
- bslib 0.4.0
- caTools 1.18.2
- cachem 1.0.6
- callr 3.7.2
- car 3.1-0
- carData 3.0-5
- iTensor 0.99.0
- cellranger 1.1.0
- checkmate 2.1.0
- circlize 0.4.15
- class 7.3-20
- classInt 0.4-7
- cli 3.3.0
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- clue 0.3-61
- cluster 2.1.4
- codetools 0.2-18
- colorspace 2.0-3
- commonmark 1.8.0
- compiler 4.2.0
- concaveman 1.1.0
- corrplot 0.92
- cowplot 1.1.1
- cpp11 0.4.2
- crayon 1.5.1
- credentials 1.3.2
- crosstalk 1.2.0
- curl 4.3.2
- data.table 1.14.2
- datasets 4.2.0
- dbplyr 2.2.1
- deldir 1.0-6
- desc 1.4.1
- devtools 2.4.4
- diffobj 0.3.5
- digest 0.6.29
- doParallel 1.0.17
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- e1071 1.7-11
- edgeR 3.38.4
- ellipsis 0.3.2
- ensembldb 2.20.2
- entropy 1.3.1
- evaluate 0.16
- expm 0.999-6
- fansi 1.0.3
- farver 2.1.1
- fastmap 1.1.0
- fields 14.1
- filelock 1.0.2
- fitdistrplus 1.1-8
- fontawesome 0.3.0
- foreach 1.5.2
- foreign 0.8-82
- formatR 1.12
- fs 1.5.2
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.9.0
- future 1.27.0
- generics 0.1.3
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- ggbeeswarm 0.6.0
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- ggplot2 3.3.6
- ggpubr 0.4.0
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- ggsci 2.9
- ggsignif 0.6.3
- gh 1.3.0
- gitcreds 0.1.1
- gld 2.6.5
- globals 0.16.0
- glue 1.6.2
- goftest 1.2-3
- gplots 3.1.3
- grDevices 4.2.0
- graph 1.74.0
- graphics 4.2.0
- grid 4.2.0
- gridExtra 2.3
- gtable 0.3.0
- gtools 3.9.3
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- ica 1.0-3
- igraph 1.3.4
- ini 0.3.1
- interactiveDisplayBase 1.34.0
- irlba 2.3.5
- isoband 0.2.5
- iterators 1.0.14
- jquerylib 0.1.4
- jsonlite 1.8.0
- knitr 1.40
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.2
- lifecycle 1.0.1
- limma 3.52.2
- listenv 0.8.0
- littler 0.3.15
- lme4 1.1-30
- lmom 2.9
- lmtest 0.9-40
- locfit 1.5-9.6
- magrittr 2.0.3
- maps 3.4.0
- maptools 1.1-4
- matrixStats 0.62.0
- mclust 5.4.10
- memoise 2.0.1
- methods 4.2.0
- mgcv 1.8-40
- mime 0.12
- miniUI 0.1.1.1
- minqa 1.2.4
- misc3d 0.9-1
- mnormt 2.1.0
- morebeach 1.0.0
- morebeachtests 1.0.0
- msigdbr 7.5.1
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- mwTensor 0.99.6
- nlme 3.1-159
- nloptr 2.0.3
- nnTensor 1.1.9
- nnet 7.3-17
- numDeriv 2016.8-1.1
- openssl 2.0.2
- optparse 1.7.3
- org.Hs.eg.db 3.15.0
- org.Mm.eg.db 3.15.0
- org.testing.db 0.1
- parallel 4.2.0
- parallelly 1.32.1
- patchwork 1.1.2
- pbapply 1.5-0
- pbkrtest 0.5.1
- pillar 1.8.1
- pkgbuild 1.3.1
- pkgconfig 2.0.3
- pkgdown 2.0.6
- pkgload 1.3.0
- plogr 0.2.0
- plot3D 1.4
- plotly 4.10.0
- plyr 1.8.7
- png 0.1-7
- polyclip 1.10-0
- polynom 1.4-1
- praise 1.0.0
- prettyunits 1.1.1
- processx 3.7.0
- profvis 0.3.7
- progress 1.2.2
- progressr 0.10.1
- promises 1.2.0.1
- proxy 0.4-27
- ps 1.7.1
- psych 2.2.5
- purrr 0.3.4
- quantreg 5.94
- rTensor 1.4.8
- ragg 1.2.2
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- rdist 0.0.5
- readxl 1.4.1
- rematch2 2.1.2
- remotes 2.4.2
- reshape2 1.4.4
- restfulr 0.0.15
- reticulate 1.25
- rgeos 0.5-9
- rhdf5 2.40.0
- rhdf5filters 1.8.0
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- rlang 1.0.4
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- sass 0.4.2
- scRNAseq 2.10.0
- scTGIF 1.10.0
- scales 1.2.1
- scater 1.24.0
- scattermore 0.8
- schex 1.10.0
- sctransform 0.3.4
- scuttle 1.6.3
- sessioninfo 1.2.2
- sf 1.0-8
- shape 1.4.6
- shiny 1.7.2
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- splatter 1.20.0
- splines 4.2.0
- stats4 4.2.0
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- ubuntu/xfonts-75dpi 1:1.0.4 nmu1
- ubuntu/xfonts-encodings 1:1.0.5-0ubuntu1
- ubuntu/xfonts-utils 1:7.7 6
- ubuntu/xorg-sgml-doctools 1:1.11-1
- ubuntu/xz-utils 5.2.4-1ubuntu1.1
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.3
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.3
- bash 5.0.17
- github.com/evanw/esbuild (devel)
- golang.org/x/sys v0.0.0-20200501145240-bc7a7d42d5c3
- stdlib 1.16.3
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.1.3
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.1.3
- POT 0.8.2
- PyYAML 6.0
- argparse 1.2.1
- joblib 1.1.0
- mypy 0.902
- numpy 1.22.4
- pandas 1.4.2
- pip 20.0.2
- python-dateutil 2.8.2
- pytz 2022.1
- scikit-learn 1.1.1
- scipy 1.8.1
- setuptools 44.0.0
- setuptools 45.2.0
- six 1.16.0
- threadpoolctl 3.1.0
- wheel 0.34.2
- wsgiref 0.1.2