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koki/sctensor-workshop : sha-fa8c4cf

Latest release: about 3 years ago - 111 downloads - 2,087 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnVIL 1.5.7
AnnotationDbi 1.55.2
AnnotationForge 1.35.2
AnnotationHub 3.1.6
BH 1.75.0-0
Biobase 2.53.0
BiocFileCache 2.1.1
BiocGenerics 0.39.2
BiocManager 1.30.16
BiocParallel 1.27.17
BiocSingular 1.9.1
BiocStyle 2.21.4
BiocVersion 3.14.0
Biostrings 2.61.2
Category 2.59.0
DBI 1.1.1
DO.db 2.9
DOSE 3.19.4
DT 0.19
DelayedArray 0.19.4
DelayedRandomArray 1.1.0
DelayedTensor 0.99.12
FNN 1.1.3
GO.db 3.14.0
GOSemSim 2.19.1
GOstats 2.59.1
GSEABase 1.55.2
GenomeInfoDb 1.29.10
GenomeInfoDbData 1.2.7
GenomicRanges 1.45.0
HDF5Array 1.21.0
IRanges 2.27.2
KEGGREST 1.33.0
KernSmooth 2.23-20
LRBaseDbi 2.3.1
MASS 7.3-54
Matrix 1.3-4
MatrixGenerics 1.5.4
MeSHDbi 1.29.2
R6 2.5.1
RANN 2.6.1
RBGL 1.69.0
RColorBrewer 1.1-2
RCurl 1.98-1.5
ROCR 1.0-11
RSQLite 2.2.8
RSpectra 0.16-0
Rcpp 1.0.7
RcppAnnoy 0.0.19
RcppArmadillo 0.10.7.0.0
RcppEigen 0.3.3.9.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
ReactomePA 1.37.0
Rgraphviz 2.37.2
Rhdf5lib 1.15.2
Rtsne 0.15
S4Vectors 0.31.5
ScaledMatrix 1.1.0
Seurat 4.0.5
SeuratObject 4.0.2
SingleCellExperiment 1.15.2
SummarizedExperiment 1.23.5
TSP 1.1-11
V8 3.4.2
XML 3.99-0.8
XVector 0.33.0
abind 1.4-5
annotate 1.71.0
ape 5.5
aplot 0.1.1
askpass 1.1
assertthat 0.2.1
backports 1.2.1
base64enc 0.1-3
base 4.1.1
beachmat 2.9.1
beachtest 1.0.0
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.2
bookdown 0.24
boot 1.3-28
brew 1.0-6
brio 1.1.2
bslib 0.3.1
caTools 1.18.2
cachem 1.0.6
callr 3.7.0
ccTensor 1.0.2
checkmate 2.0.0
class 7.3-19
classInt 0.4-3
cli 3.0.1
clipr 0.7.1
cluster 2.1.2
codetools 0.2-18
colorspace 2.0-2
commonmark 1.7
compiler 4.1.1
concaveman 1.1.0
cowplot 1.1.1
cpp11 0.4.0
crayon 1.4.1
credentials 1.3.1
crosstalk 1.1.1
curl 4.3.2
data.table 1.14.2
datasets 4.1.1
dbplyr 2.1.1
deldir 1.0-5
dendextend 1.15.1
desc 1.4.0
devtools 2.4.2
diffobj 0.3.5
digest 0.6.28
docopt 0.7.1
dotCall64 1.0-1
downlit 0.2.1
dplyr 1.0.7
dqrng 0.3.0
e1071 1.7-9
egg 0.4.5
einsum 0.1.0
ellipsis 0.3.2
enrichplot 1.13.2
entropy 1.3.1
evaluate 0.14
fansi 0.5.0
farver 2.1.0
fastmap 1.1.0
fastmatch 1.1-3
fdrtool 1.2.16
fgsea 1.19.4
fields 12.5
filelock 1.0.2
fitdistrplus 1.1-6
fontawesome 0.2.2
foreach 1.5.1
foreign 0.8-81
formatR 1.11
fs 1.5.0
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.8.1
future 1.22.1
gclus 1.3.2
genefilter 1.75.1
generics 0.1.0
gert 1.4.1
ggforce 0.3.3
ggfun 0.0.4
ggplot2 3.3.5
ggplotify 0.1.0
ggraph 2.0.5
ggrepel 0.9.1
ggridges 0.5.3
ggtree 3.1.6
gh 1.3.0
gitcreds 0.1.1
globals 0.14.0
glue 1.4.2
goftest 1.2-3
gplots 3.1.1
grDevices 4.1.1
graph 1.71.2
graphics 4.1.1
graphite 1.39.3
graphlayouts 0.7.1
grid 4.1.1
gridExtra 2.3
gridGraphics 0.5-1
gtable 0.3.0
gtools 3.9.2
heatmaply 1.3.0
here 1.0.1
hexbin 1.28.2
highr 0.9
htmltools 0.5.2
htmlwidgets 1.5.4
httpuv 1.6.3
httr 1.4.2
ica 1.0-2
igraph 1.2.7
index 0.0.0.9000
ini 0.3.1
interactiveDisplayBase 1.31.2
irlba 2.3.3
isoband 0.2.5
iterators 1.0.13
jquerylib 0.1.4
jsonlite 1.7.2
knitr 1.36
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
lazyeval 0.2.2
leiden 0.3.9
lifecycle 1.0.1
listenv 0.8.0
littler 0.3.14
lmtest 0.9-38
magrittr 2.0.1
maps 3.4.0
markdown 1.1
mathjaxr 1.4-0
matrixStats 0.61.0
memoise 2.0.0
meshr 1.99.2
methods 4.1.1
mgcv 1.8-38
mime 0.12
miniUI 0.1.1.1
misc3d 0.9-1
morebeach 1.0.0
morebeachtests 1.0.0
munsell 0.5.0
mwTensor 0.99.5
nlme 3.1-153
nnTensor 1.1.5
nnet 7.3-16
openssl 1.4.5
org.testing.db 0.1
outliers 0.14
parallel 4.1.1
parallelly 1.28.1
patchwork 1.1.1
pbapply 1.5-0
pillar 1.6.4
pkgbuild 1.2.0
pkgconfig 2.0.3
pkgdown 1.6.1
pkgload 1.2.3
plogr 0.2.0
plot3D 1.4
plotly 4.10.0
plotrix 3.8-2
plyr 1.8.6
png 0.1-7
polyclip 1.10-0
praise 1.0.0
prettyunits 1.1.1
processx 3.5.2
promises 1.2.0.1
proxy 0.4-26
ps 1.6.0
purrr 0.3.4
qap 0.1-1
qvalue 2.25.0
rTensor 1.4.8
ragg 1.1.3
rapiclient 0.1.3
rappdirs 0.3.3
rcmdcheck 1.4.0
reactome.db 1.77.0
registry 0.5-1
rematch2 2.1.2
remotes 2.4.1
reshape2 1.4.4
reticulate 1.22
rhdf5 2.37.4
rhdf5filters 1.5.0
rlang 0.4.12
rmarkdown 2.11
roxygen2 7.1.2
rpart 4.1-15
rprojroot 2.0.2
rstudioapi 0.13
rsvd 1.0.5
rversions 2.1.1
s2 1.0.7
sass 0.4.0
scTensor 2.3.4
scTensorWorkshop 0.99.0
scales 1.1.1
scattermore 0.7
scatterpie 0.1.7
schex 1.7.0
sctransform 0.3.2
seqnames.db @VERSION@
seriation 1.3.1
sessioninfo 1.1.1
sf 1.0-3
shadowtext 0.0.9
shiny 1.7.1
sitmo 2.0.2
snow 0.4-3
sourcetools 0.1.7
spam 2.7-0
spatial 7.3-14
spatstat.core 2.3-0
spatstat.data 2.1-0
spatstat.geom 2.3-0
spatstat.sparse 2.0-0
spatstat.utils 2.2-0
splines 4.1.1
stats4 4.1.1
stats 4.1.1
stringi 1.7.5
stringr 1.4.0
survival 3.2-13
sys 3.4
systemfonts 1.0.3
tagcloud 0.6
tcltk 4.1.1
tensor 1.5
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testpackage 1.0.0
testpackage 1.0.0-9000
testthat 3.1.0
textshaping 0.3.6
tibble 3.1.5
tidygraph 1.2.0
tidyr 1.1.4
tidyselect 1.1.1
tidytree 0.3.5
tinytex 0.34
tools 4.1.1
translations 4.1.1
treeio 1.17.2
tweenr 1.0.2
units 0.7-2
usethis 2.1.0
utf8 1.2.2
utils 4.1.1
uwot 0.1.10
vctrs 0.3.8
viridis 0.6.2
viridisLite 0.4.0
visNetwork 2.1.0
waldo 0.3.1
webshot 0.5.2
whisker 0.4
withr 2.4.2
wk 0.5.0
xfun 0.27
xml2 1.3.2
xopen 1.0.0
xtable 1.8-4
yaml 2.2.1
yulab.utils 0.0.4
zip 2.2.0
zlibbioc 1.39.0
zoo 1.8-9

bash 5.0.17

PyYAML 6.0
argparse 1.2.1
joblib 1.1.0
numpy 1.21.2
pandas 1.3.3
pip 20.0.2
python-dateutil 2.8.2
pytz 2021.3
scikit-learn 1.0
scipy 1.7.1
setuptools 44.0.0
setuptools 45.2.0
six 1.16.0
sklearn 0.0
threadpoolctl 3.0.0
wheel 0.34.2
wsgiref 0.1.2