jxprismdocker/test_clincnv : latest
Latest release: about 3 years ago - 76 downloads - 517 dependencies
JSONDependencies
- ClinCNV 0.1
- DEoptimR 1.0-14
- KernSmooth 2.23-20
- MASS 7.3-59
- MASS 7.3-60
- Matrix 1.5-4.1
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- RColorBrewer 1.1-3
- RSpectra 0.16-1
- Rcpp 1.0.10
- RcppEigen 0.3.3.9.3
- RcppTOML 0.2.2
- TH.data 1.1-2
- askpass 1.1
- base 4.3.0
- boot 1.3-28
- class 7.3-21
- cluster 2.1.4
- codetools 0.2-19
- coin 1.4-2
- compiler 4.3.0
- data.table 1.14.8
- datasets 4.3.0
- dbscan 1.1-11
- doParallel 1.0.17
- foreach 1.5.2
- foreign 0.8-82
- getopt 1.20.3
- grDevices 4.3.0
- graphics 4.3.0
- grid 4.3.0
- here 1.0.1
- iterators 1.0.14
- jsonlite 1.8.5
- lattice 0.21-8
- libcoin 1.0-9
- matrixStats 1.0.0
- mclust 6.0.0
- methods 4.3.0
- mgcv 1.8-42
- modeltools 0.2-23
- multcomp 1.4-25
- mvtnorm 1.2-2
- mvtnormAPI 1.0-0
- nlme 3.1-162
- nnet 7.3-18
- openssl 2.0.6
- optparse 1.7.3
- parallel 4.3.0
- party 1.3-13
- png 0.1-8
- rappdirs 0.3.3
- reticulate 1.30
- rlang 1.1.1
- robustbase 0.99-0
- rpart 4.1.19
- rprojroot 2.0.3
- sandwich 3.0-2
- spatial 7.3-11
- splines 4.3.0
- stats4 4.3.0
- stats 4.3.0
- strucchange 1.5-3
- survival 3.5-5
- sys 3.4.2
- tcltk 4.3.0
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tools 4.3.0
- translations 4.3.0
- umap 0.2.10.0
- utils 4.3.0
- withr 2.5.0
- zoo 1.8-12
- ubuntu/adduser 3.116ubuntu1
- ubuntu/apt 1.6.17
- ubuntu/base-files 10.1ubuntu2.11
- ubuntu/base-passwd 3.5.44
- ubuntu/bash 4.4.18-2ubuntu1.3
- ubuntu/binutils-common 2.30-21ubuntu1~18.04.9
- ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04.9
- ubuntu/binutils 2.30-21ubuntu1~18.04.9
- ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.7
- ubuntu/build-essential 12.4ubuntu1
- ubuntu/bzip2-doc 1.0.6-8.1ubuntu0.2
- ubuntu/bzip2 1.0.6-8.1ubuntu0.2
- ubuntu/ca-certificates 20230311ubuntu0.18.04.1
- ubuntu/coreutils 8.28-1ubuntu1
- ubuntu/cpp-7 7.5.0-3ubuntu1~18.04
- ubuntu/cpp 4:7.4.0-1ubuntu2.3
- ubuntu/dash 0.5.8-2.10
- ubuntu/debconf 1.5.66ubuntu1
- ubuntu/debianutils 4.8.4
- ubuntu/diffutils 1:3.6-1
- ubuntu/dirmngr 2.2.4-1ubuntu1.6
- ubuntu/distro-info-data 0.37ubuntu0.17
- ubuntu/dpkg-dev 1.19.0.5ubuntu2.4
- ubuntu/dpkg 1.19.0.5ubuntu2.4
- ubuntu/e2fsprogs 1.44.1-1ubuntu1.4
- ubuntu/fakeroot 1.22-2ubuntu1
- ubuntu/fdisk 2.31.1-0.4ubuntu3.7
- ubuntu/findutils 4.6.0 git 20170828-2
- ubuntu/fontconfig-config 2.12.6-0ubuntu2
- ubuntu/fontconfig 2.12.6-0ubuntu2
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/g -7 7.5.0-3ubuntu1~18.04
- ubuntu/g 4:7.4.0-1ubuntu2.3
- ubuntu/gcc-7-base 7.5.0-3ubuntu1~18.04
- ubuntu/gcc-7 7.5.0-3ubuntu1~18.04
- ubuntu/gcc-8-base 8.4.0-1ubuntu1~18.04
- ubuntu/gcc 4:7.4.0-1ubuntu2.3
- ubuntu/gfortran-7 7.5.0-3ubuntu1~18.04
- ubuntu/gfortran 4:7.4.0-1ubuntu2.3
- ubuntu/gir1.2-glib-2.0 1.56.1-1
- ubuntu/gir1.2-harfbuzz-0.0 1.7.2-1ubuntu1
- ubuntu/git-man 1:2.17.1-1ubuntu0.18
- ubuntu/git 1:2.17.1-1ubuntu0.18
- ubuntu/gnupg-l10n 2.2.4-1ubuntu1.6
- ubuntu/gnupg-utils 2.2.4-1ubuntu1.6
- ubuntu/gnupg 2.2.4-1ubuntu1.6
- ubuntu/gpg-agent 2.2.4-1ubuntu1.6
- ubuntu/gpg-wks-client 2.2.4-1ubuntu1.6
- ubuntu/gpg-wks-server 2.2.4-1ubuntu1.6
- ubuntu/gpg 2.2.4-1ubuntu1.6
- ubuntu/gpgconf 2.2.4-1ubuntu1.6
- ubuntu/gpgsm 2.2.4-1ubuntu1.6
- ubuntu/gpgv 2.2.4-1ubuntu1.6
- ubuntu/grep 3.1-2build1
- ubuntu/gzip 1.6-5ubuntu1.2
- ubuntu/hostname 3.20
- ubuntu/icu-devtools 60.2-3ubuntu3.2
- ubuntu/init-system-helpers 1.51
- ubuntu/iso-codes 3.79-1
- ubuntu/krb5-locales 1.16-2ubuntu0.4
- ubuntu/less 487-0.1
- ubuntu/libacl1 2.2.52-3build1
- ubuntu/libalgorithm-diff-perl 1.19.03-1
- ubuntu/libalgorithm-diff-xs-perl 0.04-5
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapt-inst2.0 1.6.17
- ubuntu/libapt-pkg5.0 1.6.17
- ubuntu/libasan4 7.5.0-3ubuntu1~18.04
- ubuntu/libasn1-8-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libassuan0 2.5.1-2
- ubuntu/libatomic1 8.4.0-1ubuntu1~18.04
- ubuntu/libattr1 1:2.4.47-2build1
- ubuntu/libaudit-common 1:2.8.2-1ubuntu1.1
- ubuntu/libaudit1 1:2.8.2-1ubuntu1.1
- ubuntu/libauthen-sasl-perl 2.1600-1
- ubuntu/libbinutils 2.30-21ubuntu1~18.04.9
- ubuntu/libblas-dev 3.7.1-4ubuntu1
- ubuntu/libblas3 3.7.1-4ubuntu1
- ubuntu/libblkid1 2.31.1-0.4ubuntu3.7
- ubuntu/libbsd0 0.8.7-1ubuntu0.1
- ubuntu/libbz2-1.0 1.0.6-8.1ubuntu0.2
- ubuntu/libbz2-dev 1.0.6-8.1ubuntu0.2
- ubuntu/libc-bin 2.27-3ubuntu1.6
- ubuntu/libc-dev-bin 2.27-3ubuntu1.6
- ubuntu/libc6-dev 2.27-3ubuntu1.6
- ubuntu/libc6 2.27-3ubuntu1.6
- ubuntu/libcairo2 1.15.10-2ubuntu0.1
- ubuntu/libcap-ng0 0.7.7-3.1
- ubuntu/libcc1-0 8.4.0-1ubuntu1~18.04
- ubuntu/libcilkrts5 7.5.0-3ubuntu1~18.04
- ubuntu/libcom-err2 1.44.1-1ubuntu1.4
- ubuntu/libcurl3-gnutls 7.58.0-2ubuntu3.24
- ubuntu/libcurl4-openssl-dev 7.58.0-2ubuntu3.24
- ubuntu/libcurl4 7.58.0-2ubuntu3.24
- ubuntu/libdata-dump-perl 1.23-1
- ubuntu/libdatrie1 0.2.10-7
- ubuntu/libdb5.3 5.3.28-13.1ubuntu1.1
- ubuntu/libdbus-1-3 1.12.2-1ubuntu1.4
- ubuntu/libdebconfclient0 0.213ubuntu1
- ubuntu/libdpkg-perl 1.19.0.5ubuntu2.4
- ubuntu/libdrm-amdgpu1 2.4.101-2~18.04.1
- ubuntu/libdrm-common 2.4.101-2~18.04.1
- ubuntu/libdrm-intel1 2.4.101-2~18.04.1
- ubuntu/libdrm-nouveau2 2.4.101-2~18.04.1
- ubuntu/libdrm-radeon1 2.4.101-2~18.04.1
- ubuntu/libdrm2 2.4.101-2~18.04.1
- ubuntu/libedit2 3.1-20170329-1
- ubuntu/libelf1 0.170-0.4ubuntu0.1
- ubuntu/libencode-locale-perl 1.05-1
- ubuntu/liberror-perl 0.17025-1
- ubuntu/libexpat1-dev 2.2.5-3ubuntu0.9
- ubuntu/libexpat1 2.2.5-3ubuntu0.9
- ubuntu/libext2fs2 1.44.1-1ubuntu1.4
- ubuntu/libfakeroot 1.22-2ubuntu1
- ubuntu/libfdisk1 2.31.1-0.4ubuntu3.7
- ubuntu/libffi6 3.2.1-8
- ubuntu/libfile-basedir-perl 0.07-1
- ubuntu/libfile-desktopentry-perl 0.22-1
- ubuntu/libfile-fcntllock-perl 0.22-3build2
- ubuntu/libfile-listing-perl 6.04-1
- ubuntu/libfile-mimeinfo-perl 0.28-1
- ubuntu/libfont-afm-perl 1.20-2
- ubuntu/libfontconfig1-dev 2.12.6-0ubuntu2
- ubuntu/libfontconfig1 2.12.6-0ubuntu2
- ubuntu/libfontenc1 1:1.1.3-1
- ubuntu/libfreetype6-dev 2.8.1-2ubuntu2.2
- ubuntu/libfreetype6 2.8.1-2ubuntu2.2
- ubuntu/libgcc-7-dev 7.5.0-3ubuntu1~18.04
- ubuntu/libgcc1 1:8.4.0-1ubuntu1~18.04
- ubuntu/libgcrypt20 1.8.1-4ubuntu1.3
- ubuntu/libgdbm-compat4 1.14.1-6
- ubuntu/libgdbm5 1.14.1-6
- ubuntu/libgfortran-7-dev 7.5.0-3ubuntu1~18.04
- ubuntu/libgfortran4 7.5.0-3ubuntu1~18.04
- ubuntu/libgirepository-1.0-1 1.56.1-1
- ubuntu/libgl1-mesa-dri 20.0.8-0ubuntu1~18.04.1
- ubuntu/libgl1-mesa-glx 20.0.8-0ubuntu1~18.04.1
- ubuntu/libgl1 1.0.0-2ubuntu2.3
- ubuntu/libglapi-mesa 20.0.8-0ubuntu1~18.04.1
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- ubuntu/libglib2.0-bin 2.56.4-0ubuntu0.18.04.9
- ubuntu/libglib2.0-data 2.56.4-0ubuntu0.18.04.9
- ubuntu/libglib2.0-dev-bin 2.56.4-0ubuntu0.18.04.9
- ubuntu/libglib2.0-dev 2.56.4-0ubuntu0.18.04.9
- ubuntu/libglvnd0 1.0.0-2ubuntu2.3
- ubuntu/libglx-mesa0 20.0.8-0ubuntu1~18.04.1
- ubuntu/libglx0 1.0.0-2ubuntu2.3
- ubuntu/libgmp10 2:6.1.2 dfsg-2ubuntu0.1
- ubuntu/libgnutls30 3.5.18-1ubuntu1.6
- ubuntu/libgomp1 8.4.0-1ubuntu1~18.04
- ubuntu/libgpg-error0 1.27-6
- ubuntu/libgraphite2-3 1.3.11-2
- ubuntu/libgraphite2-dev 1.3.11-2
- ubuntu/libgssapi-krb5-2 1.16-2ubuntu0.4
- ubuntu/libgssapi3-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libharfbuzz-dev 1.7.2-1ubuntu1
- ubuntu/libharfbuzz-gobject0 1.7.2-1ubuntu1
- ubuntu/libharfbuzz-icu0 1.7.2-1ubuntu1
- ubuntu/libharfbuzz0b 1.7.2-1ubuntu1
- ubuntu/libhcrypto4-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libheimbase1-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libheimntlm0-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libhogweed4 3.4.1-0ubuntu0.18.04.1
- ubuntu/libhtml-form-perl 6.03-1
- ubuntu/libhtml-format-perl 2.12-1
- ubuntu/libhtml-parser-perl 3.72-3build1
- ubuntu/libhtml-tagset-perl 3.20-3
- ubuntu/libhtml-tree-perl 5.07-1
- ubuntu/libhttp-cookies-perl 6.04-1
- ubuntu/libhttp-daemon-perl 6.01-1ubuntu0.1
- ubuntu/libhttp-date-perl 6.02-1
- ubuntu/libhttp-message-perl 6.14-1
- ubuntu/libhttp-negotiate-perl 6.00-2
- ubuntu/libhx509-5-heimdal 7.5.0 dfsg-1ubuntu0.4
- ubuntu/libice6 2:1.0.9-2ubuntu0.18.04.1
- ubuntu/libicu-dev 60.2-3ubuntu3.2
- ubuntu/libicu-le-hb-dev 1.0.3 git161113-4
- ubuntu/libicu-le-hb0 1.0.3 git161113-4
- ubuntu/libicu60 60.2-3ubuntu3.2
- ubuntu/libiculx60 60.2-3ubuntu3.2
- ubuntu/libidn2-0 2.0.4-1.1ubuntu0.2
- ubuntu/libio-html-perl 1.001-1
- ubuntu/libio-socket-ssl-perl 2.060-3~ubuntu18.04.1
- ubuntu/libipc-system-simple-perl 1.25-4
- ubuntu/libisl19 0.19-1
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- ubuntu/libjbig0 2.1-3.1ubuntu0.18.04.1
- ubuntu/libjpeg-dev 8c-2ubuntu8
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- ubuntu/libjpeg8-dev 8c-2ubuntu8
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- ubuntu/libxrender-dev 1:0.9.10-1
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- ubuntu/libxshmfence1 1.3-1
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- ubuntu/libxtst6 2:1.2.3-1
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- ubuntu/ncurses-bin 6.1-1ubuntu1.18.04.1
- ubuntu/netbase 5.4
- ubuntu/openssh-client 1:7.6p1-4ubuntu0.7
- ubuntu/openssl 1.1.1-1ubuntu2.1~18.04.23
- ubuntu/passwd 1:4.5-1ubuntu2.5
- ubuntu/patch 2.7.6-2ubuntu1.1
- ubuntu/perl-base 5.26.1-6ubuntu0.7
- ubuntu/perl-modules-5.26 5.26.1-6ubuntu0.7
- ubuntu/perl-openssl-defaults 3build1
- ubuntu/perl 5.26.1-6ubuntu0.7
- ubuntu/pinentry-curses 1.1.0-1
- ubuntu/pkg-config 0.29.1-0ubuntu2
- ubuntu/procps 2:3.3.12-3ubuntu1.2
- ubuntu/publicsuffix 20180223.1310-1
- ubuntu/python-apt-common 1.6.6
- ubuntu/python3-apt 1.6.6
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- ubuntu/r-base 4.3.0-1.1804.0
- ubuntu/r-cran-boot 1.3-28-1cran1.1804.0
- ubuntu/r-cran-class 7.3-21-1.1804.0
- ubuntu/r-cran-cluster 2.1.4-1.1804.0
- ubuntu/r-cran-codetools 0.2-19-1cran1.1804.0
- ubuntu/r-cran-foreign 0.8.82-1.1804.0
- ubuntu/r-cran-kernsmooth 2.23-20-1cran1.1804.0
- ubuntu/r-cran-lattice 0.21-8-1cran1.1804.0
- ubuntu/r-cran-mass 7.3-59-1.1804.0
- ubuntu/r-cran-matrix 1.5-4.1-1.1804.0
- ubuntu/r-cran-mgcv 1.8-42-1cran1.1804.0
- ubuntu/r-cran-nlme 3.1.162-1.1804.0
- ubuntu/r-cran-nnet 7.3-18-1.1804.0
- ubuntu/r-cran-rpart 4.1.19-1.1804.0
- ubuntu/r-cran-spatial 7.3-11-2.1804.1
- ubuntu/r-cran-survival 3.5-5-1cran1.1804.0
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- ubuntu/r-recommended 4.3.0-1.1804.0
- ubuntu/readline-common 7.0-3
- ubuntu/sed 4.4-2
- ubuntu/sensible-utils 0.0.12
- ubuntu/shared-mime-info 1.9-2
- ubuntu/software-properties-common 0.96.24.32.22
- ubuntu/sysvinit-utils 2.88dsf-59.10ubuntu1
- ubuntu/tar 1.29b-2ubuntu0.4
- ubuntu/tzdata 2023c-0ubuntu0.18.04
- ubuntu/ubuntu-keyring 2018.09.18.1~18.04.2
- ubuntu/ucf 3.0038
- ubuntu/unzip 6.0-21ubuntu1.2
- ubuntu/util-linux 2.31.1-0.4ubuntu3.7
- ubuntu/wget 1.19.4-1ubuntu2.2
- ubuntu/x11-common 1:7.7 19ubuntu7.1
- ubuntu/x11-utils 7.7 3build1
- ubuntu/x11-xserver-utils 7.7 7build1
- ubuntu/x11proto-core-dev 2018.4-4
- ubuntu/x11proto-dev 2018.4-4
- ubuntu/xauth 1:1.0.10-1
- ubuntu/xdg-user-dirs 0.17-1ubuntu1
- ubuntu/xdg-utils 1.1.2-1ubuntu2.5
- ubuntu/xorg-sgml-doctools 1:1.11-1
- ubuntu/xtrans-dev 1.3.5-1
- ubuntu/xz-utils 5.2.2-1.3ubuntu0.1
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-0ubuntu2.2
- ubuntu/zlib1g 1:1.2.11.dfsg-0ubuntu2.2